TreeWAS – Variant ID: rs9538439

Hospitalization Episode Statistics (HES)

Self-Reported Statistics (SRS)

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Results table

Term	Risk posterior probability	No effect posterior probability	Protective posterior probability
C54.1 Endometrium	0.066	0.934	0.000
C54 Malignant neoplasm of corpus uteri	0.050	0.950	0.000
C54.9 Corpus uteri, unspecified	0.042	0.958	0.000
C54.8 Overlapping lesion of corpus uteri	0.036	0.964	0.000
C54.3 Fundus uteri	0.036	0.964	0.000
C54.2 Myometrium	0.036	0.964	0.000
C54.0 Isthmus uteri	0.036	0.964	0.000
C51-C58 Malignant neoplasms of female genital organs	0.031	0.969	0.000
C56 Malignant neoplasm of ovary	0.031	0.969	0.000
C52 Malignant neoplasm of vagina	0.024	0.976	0.000
C58 Malignant neoplasm of placenta	0.023	0.977	0.000
C55 Malignant neoplasm of uterus, part unspecified	0.022	0.978	0.000
C51 Malignant neoplasm of vulva	0.020	0.980	0.000
C53 Malignant neoplasm of cervix uteri	0.019	0.981	0.000
C57 Malignant neoplasm of other and unspecified female genital organs	0.018	0.982	0.000
C51.8 Overlapping lesion of vulva	0.014	0.985	0.000
C51.2 Clitoris	0.014	0.985	0.000
C51.1 Labium minus	0.014	0.985	0.000
C53.8 Overlapping lesion of cervix uteri	0.014	0.986	0.000
C53.1 Exocervix	0.014	0.986	0.000
C51.0 Labium majus	0.013	0.987	0.000
C57.8 Overlapping lesion of female genital organs	0.013	0.987	0.000
C57.7 Other specified female genital organs	0.013	0.987	0.000
C57.4 Uterine adnexa, unspecified	0.013	0.987	0.000
C57.3 Parametrium	0.013	0.987	0.000
C57.2 Round ligament	0.013	0.987	0.000
C57.1 Broad ligament	0.013	0.987	0.000
C51.9 Vulva, unspecified	0.013	0.987	0.000
V18.0 Driver injured in nontraffic accident	0.000	0.988	0.012
C53.0 Endocervix	0.012	0.988	0.000
C53.9 Cervix uteri, unspecified	0.012	0.988	0.000
C57.9 Female genital organ, unspecified	0.011	0.989	0.000
C57.0 Fallopian tube	0.011	0.989	0.000
F20.0 Paranoid schizophrenia	0.011	0.989	0.000
F20 Schizophrenia	0.011	0.989	0.000
L90.0 Lichen sclerosus et atrophicus	0.010	0.990	0.000
F20.9 Schizophrenia, unspecified	0.010	0.990	0.000
F20.5 Residual schizophrenia	0.009	0.991	0.000
F20.8 Other schizophrenia	0.009	0.991	0.000
I77.9 Disorder of arteries and arterioles, unspecified	0.000	0.991	0.009
F25 Schizoaffective disorders	0.008	0.992	0.000
F25.9 Schizoaffective disorder, unspecified	0.008	0.992	0.000
Z50.8 Care involving use of rehabilitation procedures	0.000	0.992	0.008
F20.6 Simple schizophrenia	0.008	0.992	0.000
F20.4 Postschizophrenic depression	0.008	0.992	0.000
F20.3 Undifferentiated schizophrenia	0.008	0.992	0.000
F20.2 Catatonic schizophrenia	0.008	0.992	0.000
F20.1 Hebephrenic schizophrenia	0.008	0.992	0.000
I35.2 Aortic (valve) stenosis with insufficiency	0.000	0.992	0.008
F25.1 Schizoaffective disorder, depressive type	0.008	0.992	0.000
F20-F29 Schizophrenia, schizotypal and delusional disorders	0.007	0.993	0.000
F25.2 Schizoaffective disorder, mixed type	0.007	0.993	0.000
I77.6 Arteritis, unspecified	0.000	0.993	0.007
I77 Other disorders of arteries and arterioles	0.000	0.993	0.007
F40.2 Specific (isolated) phobias	0.000	0.993	0.007
I77.0 Arteriovenous fistula, acquired	0.000	0.993	0.007
Q21.1 Atrial septal defect	0.007	0.993	0.000
K65.0 Acute peritonitis	0.000	0.993	0.007
F25.8 Other schizoaffective disorders	0.006	0.994	0.000
I45.1 Other and unspecified right bundle-branch block	0.006	0.994	0.000
D41.4 Bladder	0.000	0.994	0.006
S64.4 Injury of digital nerve of other finger	0.006	0.994	0.000
F22 Persistent delusional disorders	0.006	0.994	0.000
F25.0 Schizoaffective disorder, manic type	0.006	0.994	0.000
K29.0 Acute haemorrhagic gastritis	0.000	0.994	0.006
F28 Other nonorganic psychotic disorders	0.005	0.994	0.000
F24 Induced delusional disorder	0.005	0.994	0.000
F21 Schizotypal disorder	0.005	0.994	0.000
Q43 Other congenital malformations of intestine	0.006	0.994	0.000
K29.6 Other gastritis	0.000	0.995	0.005
Q43.0 Meckel's diverticulum	0.005	0.995	0.000
Q21 Congenital malformations of cardiac septa	0.005	0.995	0.000
I77.8 Other specified disorders of arteries and arterioles	0.000	0.995	0.005
Q43.8 Other specified congenital malformations of intestine	0.005	0.995	0.000
I77.5 Necrosis of artery	0.000	0.995	0.005
I77.4 Coeliac artery compression syndrome	0.000	0.995	0.005
I77.3 Arterial fibromuscular dysplasia	0.000	0.995	0.005
F23 Acute and transient psychotic disorders	0.005	0.995	0.000
I35.9 Aortic valve disorder, unspecified	0.000	0.995	0.005
I77.2 Rupture of artery	0.000	0.995	0.005
Q38-Q45 Other congenital malformations of the digestive system	0.005	0.995	0.000
Q21.3 Tetralogy of Fallot	0.005	0.995	0.000
F22.9 Persistent delusional disorder, unspecified	0.005	0.995	0.000
I35.0 Aortic (valve) stenosis	0.000	0.995	0.005
Q40 Other congenital malformations of upper alimentary tract	0.005	0.995	0.000
V18 Pedal cyclist injured in noncollision transport accident	0.000	0.995	0.005
I35 Nonrheumatic aortic valve disorders	0.000	0.995	0.005
M79.09 Rheumatism, unspecified (Site unspecified)	0.005	0.995	0.000
Q43.9 Congenital malformation of intestine, unspecified	0.004	0.995	0.000
F22.8 Other persistent delusional disorders	0.004	0.996	0.000
Q53.1 Undescended testicle, unilateral	0.004	0.996	0.000
Q43.3 Congenital malformations of intestinal fixation	0.004	0.996	0.000
F22.0 Delusional disorder	0.004	0.996	0.000
Q43.7 Persistent cloaca	0.004	0.996	0.000
Q43.6 Congenital fistula of rectum and anus	0.004	0.996	0.000
Q43.5 Ectopic anus	0.004	0.996	0.000
Q43.4 Duplication of intestine	0.004	0.996	0.000
Q43.2 Other congenital functional disorders of colon	0.004	0.996	0.000
Q43.1 Hirschsprung's disease	0.004	0.996	0.000
Q40.2 Other specified congenital malformations of stomach	0.004	0.996	0.000
Q21.9 Congenital malformation of cardiac septum, unspecified	0.004	0.996	0.000
Q21.8 Other congenital malformations of cardiac septa	0.004	0.996	0.000
Q21.4 Aortopulmonary septal defect	0.004	0.996	0.000
Q21.2 Atrioventricular septal defect	0.004	0.996	0.000
Q53 Undescended testicle	0.004	0.996	0.000
F23.0 Acute polymorphic psychotic disorder without symptoms of schizophrenia	0.004	0.996	0.000
T90.4 Sequelae of injury of eye and orbit	0.000	0.996	0.004
Q40.8 Other specified congenital malformations of upper alimentary tract	0.004	0.996	0.000
Q21.0 Ventricular septal defect	0.004	0.996	0.000
T90.9 Sequelae of unspecified injury of head	0.000	0.996	0.004
Chapter XVII Congenital malformations, deformations and chromosomal abnormalities	0.004	0.996	0.000
F23.8 Other acute and transient psychotic disorders	0.004	0.996	0.000
F23.3 Other acute predominantly delusional psychotic disorders	0.004	0.996	0.000
F23.2 Acute schizophrenia-like psychotic disorder	0.004	0.996	0.000
F23.1 Acute polymorphic psychotic disorder with symptoms of schizophrenia	0.004	0.996	0.000
Q45 Other congenital malformations of digestive system	0.004	0.996	0.000
Q50-Q56 Congenital malformations of genital organs	0.004	0.996	0.000
M06.90 Rheumatoid arthritis, unspecified (Multiple sites)	0.004	0.996	0.000
Q42 Congenital absence, atresia and stenosis of large intestine	0.004	0.996	0.000
Q41 Congenital absence, atresia and stenosis of small intestine	0.004	0.996	0.000
Q40.1 Congenital hiatus hernia	0.004	0.996	0.000
F40 Phobic anxiety disorders	0.000	0.996	0.004
Q87 Other specified congenital malformation syndromes affecting multiple systems	0.004	0.996	0.000
H35.0 Background retinopathy and retinal vascular changes	0.004	0.996	0.000
G50.0 Trigeminal neuralgia	0.004	0.996	0.000
Q44 Congenital malformations of gallbladder, bile ducts and liver	0.004	0.996	0.000
M84.16 Nonunion of fracture [pseudarthrosis] (Lower leg)	0.004	0.996	0.000
Q40.9 Congenital malformation of upper alimentary tract, unspecified	0.003	0.996	0.000
Q40.3 Congenital malformation of stomach, unspecified	0.003	0.996	0.000
Q40.0 Congenital hypertrophic pyloric stenosis	0.003	0.996	0.000
Q39 Congenital malformations of oesophagus	0.004	0.996	0.000
Q80-Q89 Other congenital malformations	0.004	0.996	0.000
V18.9 Unspecified pedal cyclist injured in traffic accident	0.000	0.996	0.003
V18.4 Driver injured in traffic accident	0.000	0.996	0.003
V18.1 Passenger injured in nontraffic accident	0.000	0.996	0.003
T90.1 Sequelae of open wound of head	0.000	0.996	0.004
T90 Sequelae of injuries of head	0.000	0.996	0.004
Q20-Q28 Congenital malformations of the circulatory system	0.003	0.996	0.000
Q87.4 Marfan's syndrome	0.003	0.997	0.000
F29 Unspecified nonorganic psychosis	0.003	0.997	0.000
Q90-Q99 Chromosomal abnormalities, not elsewhere classified	0.003	0.997	0.000
Q87.8 Other specified congenital malformation syndromes, not elsewhere classified	0.003	0.997	0.000
V18.2 Unspecified pedal cyclist injured in nontraffic accident	0.000	0.997	0.003
Q65-Q79 Congenital malformations and deformations of the musculoskeletal system	0.003	0.997	0.000
F40.0 Agoraphobia	0.000	0.997	0.003
Q50 Congenital malformations of ovaries, Fallopian tubes and broad ligaments	0.003	0.997	0.000
Q38 Other congenital malformations of tongue, mouth and pharynx	0.003	0.997	0.000
Q83 Congenital malformations of breast	0.003	0.997	0.000
V18.3 Person injured while boarding or alighting	0.000	0.997	0.003
I35.8 Other aortic valve disorders	0.003	0.997	0.001
Q83.8 Other congenital malformations of breast	0.003	0.997	0.000
S90.9 Superficial injury of ankle and foot, unspecified	0.000	0.997	0.003
Q65 Congenital deformities of hip	0.003	0.997	0.000
M84.15 Nonunion of fracture [pseudarthrosis] (Pelvic region and thigh)	0.003	0.997	0.000
S90.3 Contusion of other and unspecified parts of foot	0.000	0.997	0.003
Q44.5 Other congenital malformations of bile ducts	0.003	0.997	0.000
Q53.9 Undescended testicle, unspecified	0.003	0.997	0.000
Q53.2 Undescended testicle, bilateral	0.003	0.997	0.000
Q53.0 Ectopic testis	0.003	0.997	0.000
Q65.8 Other congenital deformities of hip	0.003	0.997	0.000
R06.5 Mouth breathing	0.003	0.997	0.000
Q54 Hypospadias	0.003	0.997	0.000
S90 Superficial injury of ankle and foot	0.000	0.997	0.003
M05.90 Seropositive rheumatoid arthritis, unspecified (Multiple sites)	0.003	0.997	0.000
V18.5 Passenger injured in traffic accident	0.000	0.997	0.003
Q98 Other sex chromosome abnormalities, male phenotype, not elsewhere classified	0.003	0.997	0.000
M23.21 Derangement of meniscus due to old tear or injury (Anterior cruciate ligament or Anterior horn of medial meniscus)	0.000	0.997	0.003
L28.0 Lichen simplex chronicus	0.000	0.997	0.003
Q45.8 Other specified congenital malformations of digestive system	0.003	0.997	0.000
Q76 Congenital malformations of spine and bony thorax	0.003	0.997	0.000
Q76.0 Spina bifida occulta	0.003	0.997	0.000
Q35-Q37 Cleft lip and cleft palate	0.003	0.997	0.000
Q30-Q34 Congenital malformations of the respiratory system	0.003	0.997	0.000
Q45.9 Congenital malformation of digestive system, unspecified	0.003	0.997	0.000
Q45.3 Other congenital malformations of pancreas and pancreatic duct	0.003	0.997	0.000
Q45.2 Congenital pancreatic cyst	0.003	0.997	0.000
Q45.1 Annular pancreas	0.003	0.997	0.000
Q45.0 Agenesis, aplasia and hypoplasia of pancreas	0.003	0.997	0.000
Q87.0 Congenital malformation syndromes predominantly affecting facial appearance	0.003	0.997	0.000
T90.8 Sequelae of other specified injuries of head	0.000	0.997	0.003
Q56 Indeterminate sex and pseudohermaphroditism	0.003	0.997	0.000
S90.8 Other superficial injuries of ankle and foot	0.000	0.997	0.003
Q78 Other osteochondrodysplasias	0.003	0.997	0.000
Q39.9 Congenital malformation of oesophagus, unspecified	0.003	0.997	0.000
Q41.9 Congenital absence, atresia and stenosis of small intestine, part unspecified	0.003	0.997	0.000
Q41.8 Congenital absence, atresia and stenosis of other specified parts of small intestine	0.003	0.997	0.000
Q41.2 Congenital absence, atresia and stenosis of ileum	0.003	0.997	0.000
Q41.1 Congenital absence, atresia and stenosis of jejunum	0.003	0.997	0.000
Q41.0 Congenital absence, atresia and stenosis of duodenum	0.003	0.997	0.000
Q42.9 Congenital absence, atresia and stenosis of large intestine, part unspecified	0.003	0.997	0.000
Q42.8 Congenital absence, atresia and stenosis of other parts of large intestine	0.003	0.997	0.000
Q42.3 Congenital absence, atresia and stenosis of anus without fistula	0.003	0.997	0.000
Q42.2 Congenital absence, atresia and stenosis of anus with fistula	0.003	0.997	0.000
Q42.1 Congenital absence, atresia and stenosis of rectum without fistula	0.003	0.997	0.000
Q42.0 Congenital absence, atresia and stenosis of rectum with fistula	0.003	0.997	0.000
S90.0 Contusion of ankle	0.000	0.997	0.003
Q10-Q18 Congenital malformations of eye, ear, face and neck	0.003	0.997	0.000
Q52 Other congenital malformations of female genitalia	0.003	0.997	0.000
F40.8 Other phobic anxiety disorders	0.000	0.997	0.003
F40.1 Social phobias	0.000	0.997	0.003
Q87.5 Other congenital malformation syndromes with other skeletal changes	0.003	0.997	0.000
Q87.3 Congenital malformation syndromes involving early overgrowth	0.003	0.997	0.000
Q87.2 Congenital malformation syndromes predominantly involving limbs	0.003	0.997	0.000
Q87.1 Congenital malformation syndromes predominantly associated with short stature	0.003	0.997	0.000
Q39.6 Diverticulum of oesophagus	0.003	0.997	0.000
Q98.4 Klinefelter's syndrome, unspecified	0.003	0.997	0.000
Q44.7 Other congenital malformations of liver	0.003	0.997	0.000
Q44.4 Choledochal cyst	0.003	0.997	0.000
Q44.3 Congenital stenosis and stricture of bile ducts	0.003	0.997	0.000
Q44.2 Atresia of bile ducts	0.003	0.997	0.000
Q44.1 Other congenital malformations of gallbladder	0.003	0.997	0.000
Q44.0 Agenesis, aplasia and hypoplasia of gallbladder	0.003	0.997	0.000
Q22 Congenital malformations of pulmonary and tricuspid valves	0.003	0.997	0.000
F40.9 Phobic anxiety disorder, unspecified	0.000	0.997	0.003
F23.9 Acute and transient psychotic disorder, unspecified	0.003	0.997	0.000
Q39.8 Other congenital malformations of oesophagus	0.003	0.997	0.000
Q39.5 Congenital dilatation of oesophagus	0.003	0.997	0.000
Q39.3 Congenital stenosis and stricture of oesophagus	0.003	0.997	0.000
Q39.2 Congenital tracheooesophageal fistula without atresia	0.003	0.997	0.000
Q39.1 Atresia of oesophagus with tracheooesophageal fistula	0.003	0.997	0.000
Q39.0 Atresia of oesophagus without fistula	0.003	0.997	0.000
Q86 Congenital malformation syndromes due to known exogenous causes, not elsewhere classified	0.003	0.997	0.000
Q84 Other congenital malformations of integument	0.003	0.997	0.000
Q81 Epidermolysis bullosa	0.003	0.997	0.000
Q80 Congenital ichthyosis	0.003	0.997	0.000
V18.49 Pedal cyclist injured in noncollision transport accident; driver injured in traffic accident ; during unspecified activity	0.000	0.997	0.003
V18.99 Pedal cyclist injured in noncollision transport accident; unspecified pedal cyclist injured in traffic accident; during unspecified activity	0.000	0.997	0.003
Q50.5 Embryonic cyst of broad ligament	0.003	0.997	0.000
Q50.4 Embryonic cyst of Fallopian tube	0.003	0.997	0.000
Q90 Down's syndrome	0.003	0.997	0.000
Q54.1 Hypospadias, penile	0.003	0.997	0.000
T90.3 Sequelae of injury of cranial nerves	0.000	0.997	0.003
M05.96 Seropositive rheumatoid arthritis, unspecified (Lower leg)	0.003	0.997	0.000
Q99 Other chromosome abnormalities, not elsewhere classified	0.003	0.997	0.000
Q38.1 Ankyloglossia	0.003	0.997	0.000
Q78.0 Osteogenesis imperfecta	0.003	0.997	0.000
Q26 Congenital malformations of great veins	0.003	0.997	0.000
Q20 Congenital malformations of cardiac chambers and connexions	0.003	0.997	0.000
Q54.8 Other hypospadias	0.003	0.997	0.000
Q25 Congenital malformations of great arteries	0.003	0.997	0.000
K51.5 Mucosal proctocolitis	0.003	0.997	0.000
Q97 Other sex chromosome abnormalities, female phenotype, not elsewhere classified	0.003	0.997	0.000
Q95 Balanced rearrangements and structural markers, not elsewhere classified	0.003	0.997	0.000
Q93 Monosomies and deletions from the autosomes, not elsewhere classified	0.003	0.997	0.000
Q92 Other trisomies and partial trisomies of the autosomes, not elsewhere classified	0.003	0.997	0.000
Q91 Edwards' syndrome and Patau's syndrome	0.003	0.997	0.000
Q55 Other congenital malformations of male genital organs	0.003	0.997	0.000
M05.9 Seropositive rheumatoid arthritis, unspecified	0.003	0.997	0.000
T90.0 Sequelae of superficial injury of head	0.000	0.997	0.003
Q77 Osteochondrodysplasia with defects of growth of tubular bones and spine	0.003	0.997	0.000
Q75 Other congenital malformations of skull and face bones	0.003	0.997	0.000
Q73 Reduction defects of unspecified limb	0.003	0.997	0.000
Q72 Reduction defects of lower limb	0.003	0.997	0.000
Q71 Reduction defects of upper limb	0.003	0.997	0.000
Q70 Syndactyly	0.003	0.997	0.000
Q69 Polydactyly	0.003	0.997	0.000
Q68 Other congenital musculoskeletal deformities	0.003	0.997	0.000
Q89 Other congenital malformations, not elsewhere classified	0.002	0.997	0.000
M84.1 Nonunion of fracture [pseudarthrosis]	0.003	0.997	0.000
Q50.6 Other congenital malformatons of Fallopian tube and broad ligament	0.003	0.997	0.000
Q50.3 Other congenital malformations of ovary	0.003	0.997	0.000
Q50.2 Congenital torsion of ovary	0.003	0.997	0.000
Q50.1 Developmental ovarian cyst	0.003	0.997	0.000
Q50.0 Congenital absence of ovary	0.003	0.997	0.000
M84.18 Nonunion of fracture [pseudarthrosis] (Other)	0.003	0.997	0.000
Q38.8 Other congenital malformations of pharynx	0.003	0.997	0.000
Q38.5 Congenital malformations of palate, not elsewhere classified	0.003	0.997	0.000
Q38.4 Congenital malformations of salivary glands and ducts	0.003	0.997	0.000
Q38.3 Other congenital malformations of tongue	0.003	0.997	0.000
Q38.2 Macroglossia	0.003	0.997	0.000
Q38.0 Congenital malformations of lips, not elsewhere classified	0.003	0.997	0.000
Q15 Other congenital malformations of eye	0.003	0.997	0.000
Q83.9 Congenital malformation of breast, unspecified	0.002	0.997	0.000
Q83.3 Accessory nipple	0.002	0.997	0.000
Q83.2 Absent nipple	0.002	0.997	0.000
Q83.0 Congenital absence of breast with absent nipple	0.002	0.997	0.000
T90.5 Sequelae of intracranial injury	0.000	0.997	0.003
M90.72 Fracture of bone in neoplastic disease (Upper arm)	0.003	0.997	0.000
K57.2 Diverticular disease of large intestine with perforation and abscess	0.003	0.997	0.000
Q96 Turner's syndrome	0.002	0.997	0.000
Q38.6 Other congenital malformations of mouth	0.002	0.997	0.000
Q65.9 Congenital deformity of hip, unspecified	0.002	0.997	0.000
Q65.6 Unstable hip	0.002	0.997	0.000
Q65.5 Congenital subluxation of hip, unspecified	0.002	0.997	0.000
Q65.4 Congenital subluxation of hip, bilateral	0.002	0.997	0.000
Q65.3 Congenital subluxation of hip, unilateral	0.002	0.997	0.000
Q65.2 Congenital dislocation of hip, unspecified	0.002	0.997	0.000
Q65.1 Congenital dislocation of hip, bilateral	0.002	0.997	0.000
Q65.0 Congenital dislocation of hip, unilateral	0.002	0.997	0.000
E11.4 With neurological complications	0.000	0.997	0.003
Q82 Other congenital malformations of skin	0.002	0.997	0.000
S90.1 Contusion of toe(s) without damage to nail	0.000	0.997	0.002
D04.6 Skin of upper limb, including shoulder	0.003	0.997	0.000
Q54.4 Congenital chordee	0.002	0.997	0.000
Q54.3 Hypospadias, perineal	0.002	0.997	0.000
Q54.2 Hypospadias, penoscrotal	0.002	0.997	0.000
R27.8 Other and unspecified lack of coordination	0.000	0.997	0.003
S90.7 Multiple superficial injuries of ankle and foot	0.000	0.997	0.002
S90.2 Contusion of toe(s) with damage to nail	0.000	0.997	0.002
Q24 Other congenital malformations of heart	0.002	0.997	0.000
Q74 Other congenital malformations of limb(s)	0.002	0.997	0.000
M21.07 Valgus deformity, not elsewhere classified (Ankle and foot)	0.000	0.997	0.002
Q89.3 Situs inversus	0.002	0.997	0.000
Q51 Congenital malformations of uterus and cervix	0.002	0.997	0.000
Q76.5 Cervical rib	0.002	0.997	0.000
Q98.9 Sex chromosome abnormality, male phenotype, unspecified	0.002	0.997	0.000
Q98.8 Other specified sex chromosome abnormalities, male phenotype	0.002	0.997	0.000
Q98.7 Male with sex chromosome mosaicism	0.002	0.997	0.000
Q98.6 Male with structurally abnormal sex chromosome	0.002	0.997	0.000
Q98.5 Karyotype 47,XYY	0.002	0.997	0.000
Q98.3 Other male with 46,XX karyotype	0.002	0.997	0.000
Q98.2 Klinefelter's syndrome, male with 46,XX karyotype	0.002	0.997	0.000
Q98.1 Klinefelter's syndrome, male with more than two X chromosomes	0.002	0.997	0.000
Q98.0 Klinefelter's syndrome karyotype 47,XXY	0.002	0.997	0.000
T98.3 Sequelae of complications of surgical and medical care, not elsewhere classified	0.002	0.997	0.000
Q66 Congenital deformities of feet	0.002	0.997	0.000
Q39.4 Oesophageal web	0.002	0.997	0.000
Q76.9 Congenital malformation of bony thorax, unspecified	0.002	0.997	0.000
Q76.8 Other congenital malformations of bony thorax	0.002	0.997	0.000
Q76.7 Congenital malformation of sternum	0.002	0.997	0.000
Q76.6 Other congenital malformations of ribs	0.002	0.997	0.000
Q76.3 Congenital scoliosis due to congenital bony malformation	0.002	0.997	0.000
Q76.2 Congenital spondylolisthesis	0.002	0.997	0.000
Q76.1 Klippel-Feil syndrome	0.002	0.997	0.000
Q22.1 Congenital pulmonary valve stenosis	0.002	0.997	0.000
Q11 Anophthalmos, microphthalmos and macrophthalmos	0.002	0.997	0.000
Q34 Other congenital malformations of respiratory system	0.002	0.997	0.000
Q33 Congenital malformations of lung	0.002	0.997	0.000
Q32 Congenital malformations of trachea and bronchus	0.002	0.997	0.000
Q31 Congenital malformations of larynx	0.002	0.997	0.000
Q30 Congenital malformations of nose	0.002	0.997	0.000
Q37 Cleft palate with cleft lip	0.002	0.997	0.000
Q36 Cleft lip	0.002	0.997	0.000
Q35 Cleft palate	0.002	0.997	0.000
M06.09 Seronegative rheumatoid arthritis (Site unspecified)	0.002	0.998	0.000
Q15.0 Congenital glaucoma	0.002	0.998	0.000
Q56.4 Indeterminate sex, unspecified	0.002	0.998	0.000
Q56.3 Pseudohermaphroditism, unspecified	0.002	0.998	0.000
Q56.2 Female pseudohermaphroditism, not elsewhere classified	0.002	0.998	0.000
Q56.1 Male pseudohermaphroditism, not elsewhere classified	0.002	0.998	0.000
Q56.0 Hermaphroditism, not elsewhere classified	0.002	0.998	0.000
Q78.9 Osteochondrodysplasia, unspecified	0.002	0.998	0.000
Q78.8 Other specified osteochondrodysplasias	0.002	0.998	0.000
Q78.6 Multiple congenital exostoses	0.002	0.998	0.000
Q78.5 Metaphyseal dysplasia	0.002	0.998	0.000
Q78.4 Enchondromatosis	0.002	0.998	0.000
Q78.3 Progressive diaphyseal dysplasia	0.002	0.998	0.000
Q78.2 Osteopetrosis	0.002	0.998	0.000
Q78.1 Polyostotic fibrous dysplasia	0.002	0.998	0.000
Q82.8 Other specified congenital malformations of skin	0.002	0.998	0.000
Q83.1 Accessory breast	0.002	0.998	0.000
K29 Gastritis and duodenitis	0.000	0.998	0.002
Q00-Q07 Congenital malformations of the nervous system	0.002	0.998	0.000
E80.4 Gilbert's syndrome	0.002	0.998	0.000
Q25.3 Stenosis of aorta	0.002	0.998	0.000
Q16 Congenital malformations of ear causing impairment of hearing	0.002	0.998	0.000
Q14 Congenital malformations of posterior segment of eye	0.002	0.998	0.000
Q13 Congenital malformations of anterior segment of eye	0.002	0.998	0.000
Q52.9 Congenital malformation of female genitalia, unspecified	0.002	0.998	0.000
Q52.8 Other specified congenital malformations of female genitalia	0.002	0.998	0.000
Q52.7 Other congenital malformations of vulva	0.002	0.998	0.000
Q52.6 Congenital malformation of clitoris	0.002	0.998	0.000
Q52.4 Other congenital malformations of vagina	0.002	0.998	0.000
Q52.3 Imperforate hymen	0.002	0.998	0.000
Q52.2 Congenital rectovaginal fistula	0.002	0.998	0.000
Q52.1 Doubling of vagina	0.002	0.998	0.000
Q52.0 Congenital absence of vagina	0.002	0.998	0.000
Q90.9 Down's syndrome, unspecified	0.002	0.998	0.000
Q85 Phakomatoses, not elsewhere classified	0.002	0.998	0.000
M05.94 Seropositive rheumatoid arthritis, unspecified (Hand)	0.002	0.998	0.000
G51.9 Disorder of facial nerve, unspecified	0.002	0.998	0.000
Q17 Other congenital malformations of ear	0.002	0.998	0.000
Q67 Congenital musculoskeletal deformities of head, face, spine and chest	0.002	0.998	0.000
Q25.4 Other congenital malformations of aorta	0.002	0.998	0.000
I77.1 Stricture of artery	0.000	0.998	0.002
Q22.9 Congenital malformation of tricuspid valve, unspecified	0.002	0.998	0.000
Q22.8 Other congenital malformations of tricuspid valve	0.002	0.998	0.000
Q22.6 Hypoplastic right heart syndrome	0.002	0.998	0.000
Q22.5 Ebstein's anomaly	0.002	0.998	0.000
Q22.4 Congenital tricuspid stenosis	0.002	0.998	0.000
Q22.3 Other congenital malformations of pulmonary valve	0.002	0.998	0.000
Q22.2 Congenital pulmonary valve insufficiency	0.002	0.998	0.000
Q22.0 Pulmonary valve atresia	0.002	0.998	0.000
Q52.5 Fusion of labia	0.002	0.998	0.000
S82.20 Fracture of shaft of tibia (closed)	0.002	0.998	0.000
Q80.9 Congenital ichthyosis, unspecified	0.002	0.998	0.000
Q80.8 Other congenital ichthyosis	0.002	0.998	0.000
Q80.4 Harlequin foetus	0.002	0.998	0.000
Q80.3 Congenital bullous ichthyosiform erythroderma	0.002	0.998	0.000
Q80.2 Lamellar ichthyosis	0.002	0.998	0.000
Q80.1 X-linked ichthyosis	0.002	0.998	0.000
Q80.0 Ichthyosis vulgaris	0.002	0.998	0.000
Q81.9 Epidermolysis bullosa, unspecified	0.002	0.998	0.000
Q81.8 Other epidermolysis bullosa	0.002	0.998	0.000
Q81.2 Epidermolysis bullosa dystrophica	0.002	0.998	0.000
Q81.1 Epidermolysis bullosa letalis	0.002	0.998	0.000
Q81.0 Epidermolysis bullosa simplex	0.002	0.998	0.000
Q84.9 Congenital malformation of integument, unspecified	0.002	0.998	0.000
Q84.8 Other specified congenital malformations of integument	0.002	0.998	0.000
Q84.6 Other congenital malformations of nails	0.002	0.998	0.000
Q84.5 Enlarged and hypertrophic nails	0.002	0.998	0.000
Q84.4 Congenital leukonychia	0.002	0.998	0.000
Q84.3 Anonychia	0.002	0.998	0.000
Q84.2 Other congenital malformations of hair	0.002	0.998	0.000
Q84.1 Congenital morphological disturbances of hair, not elsewhere classified	0.002	0.998	0.000
Q84.0 Congenital alopecia	0.002	0.998	0.000
Q86.8 Other congenital malformation syndromes due to known exogenous causes	0.002	0.998	0.000
Q86.2 Dysmorphism due to warfarin	0.002	0.998	0.000
Q86.1 Foetal hydantoin syndrome	0.002	0.998	0.000
Q86.0 Foetal alcohol syndrome (dysmorphic)	0.002	0.998	0.000
K65 Peritonitis	0.000	0.998	0.002
K29.5 Chronic gastritis, unspecified	0.000	0.998	0.002
Q54.9 Hypospadias, unspecified	0.002	0.998	0.000
Q99.8 Other specified chromosome abnormalities	0.002	0.998	0.000
Q12 Congenital lens malformations	0.002	0.998	0.000
Q90.2 Trisomy 21, translocation	0.002	0.998	0.000
Q90.1 Trisomy 21, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q90.0 Trisomy 21, meiotic nondisjunction	0.002	0.998	0.000
Q24.9 Congenital malformation of the heart, unspecified	0.002	0.998	0.000
Q44.6 Cystic disease of liver	0.002	0.998	0.000
Q10 Congenital malformations of eyelid, lachrymal apparatus and orbit	0.002	0.998	0.000
M84.14 Nonunion of fracture [pseudarthrosis] (Hand)	0.002	0.998	0.000
D63.0 Anaemia in neoplastic disease	0.002	0.998	0.000
Q99.9 Chromosomal abnormality, unspecified	0.002	0.998	0.000
Q99.2 Fragile X chromosome	0.002	0.998	0.000
Q99.1 46,XX true hermaphrodite	0.002	0.998	0.000
Q99.0 Chimera 46,XX/46,XY	0.002	0.998	0.000
S22.20 Fracture of sternum (closed)	0.000	0.998	0.002
M90.7 Fracture of bone in neoplastic disease	0.002	0.998	0.000
Q20.9 Congenital malformation of cardiac chambers and connexions, unspecified	0.002	0.998	0.000
Q20.8 Other congenital malformations of cardiac chambers and connexions	0.002	0.998	0.000
Q20.6 Isomerism of atrial appendages	0.002	0.998	0.000
Q20.5 Discordant atrioventricular connexion	0.002	0.998	0.000
Q20.4 Double inlet ventricle	0.002	0.998	0.000
Q20.3 Discordant ventriculoarterial connexion	0.002	0.998	0.000
Q20.2 Double outlet left ventricle	0.002	0.998	0.000
Q20.1 Double outlet right ventricle	0.002	0.998	0.000
Q20.0 Common arterial trunk	0.002	0.998	0.000
Q25.9 Congenital malformation of great arteries, unspecified	0.002	0.998	0.000
Q25.8 Other congenital malformations of great arteries	0.002	0.998	0.000
Q25.7 Other congenital malformations of pulmonary artery	0.002	0.998	0.000
Q25.5 Atresia of pulmonary artery	0.002	0.998	0.000
Q25.2 Atresia of aorta	0.002	0.998	0.000
Q26.9 Congenital malformation of great vein, unspecified	0.002	0.998	0.000
Q26.8 Other congenital malformations of great veins	0.002	0.998	0.000
Q26.6 Portal vein-hepatic artery fistula	0.002	0.998	0.000
Q26.5 Anomalous portal venous connexion	0.002	0.998	0.000
Q26.4 Anomalous pulmonary venous connexion, unspecified	0.002	0.998	0.000
Q26.3 Partial anomalous pulmonary venous connexion	0.002	0.998	0.000
Q26.2 Total anomalous pulmonary venous connexion	0.002	0.998	0.000
Q26.1 Persistent left superior vena cava	0.002	0.998	0.000
Q26.0 Congenital stenosis of vena cava	0.002	0.998	0.000
M84.12 Nonunion of fracture [pseudarthrosis] (Upper arm)	0.002	0.998	0.000
Q91.7 Patau's syndrome, unspecified	0.002	0.998	0.000
Q91.6 Trisomy 13, translocation	0.002	0.998	0.000
Q91.5 Trisomy 13, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q91.4 Trisomy 13, meiotic nondisjunction	0.002	0.998	0.000
Q91.3 Edwards' syndrome, unspecified	0.002	0.998	0.000
Q91.2 Trisomy 18, translocation	0.002	0.998	0.000
Q91.1 Trisomy 18, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q91.0 Trisomy 18, meiotic nondisjunction	0.002	0.998	0.000
Q92.9 Trisomy and partial trisomy of autosomes, unspecified	0.002	0.998	0.000
Q92.8 Other specified trisomies and partial trisomies of autosomes	0.002	0.998	0.000
Q92.7 Triploidy and polyploidy	0.002	0.998	0.000
Q92.6 Extra marker chromosomes	0.002	0.998	0.000
Q92.5 Duplications with other complex rearrangements	0.002	0.998	0.000
Q92.4 Duplications seen only at prometaphase	0.002	0.998	0.000
Q92.3 Minor partial trisomy	0.002	0.998	0.000
Q92.2 Major partial trisomy	0.002	0.998	0.000
Q92.1 Whole chromosome trisomy, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q92.0 Whole chromosome trisomy, meiotic nondisjunction	0.002	0.998	0.000
Q93.9 Deletion from autosomes, unspecified	0.002	0.998	0.000
Q93.8 Other deletions from the autosomes	0.002	0.998	0.000
Q93.7 Deletions with other complex rearrangements	0.002	0.998	0.000
Q93.6 Deletions seen only at prometaphase	0.002	0.998	0.000
Q93.5 Other deletions of part of a chromosome	0.002	0.998	0.000
Q93.4 Deletion of short arm of chromosome 5	0.002	0.998	0.000
Q93.3 Deletion of short arm of chromosome 4	0.002	0.998	0.000
Q93.2 Chromosome replaced with ring or dicentric	0.002	0.998	0.000
Q93.1 Whole chromosome monosomy, mosaicism (mitotic nondisjunction)	0.002	0.998	0.000
Q93.0 Whole chromosome monosomy, meiotic nondisjunction	0.002	0.998	0.000
Q95.9 Balanced rearrangement and structural marker, unspecified	0.002	0.998	0.000
Q95.8 Other balanced rearrangements and structural markers	0.002	0.998	0.000
Q95.5 Individuals with autosomal fragile site	0.002	0.998	0.000
Q95.4 Individuals with marker heterochromatin	0.002	0.998	0.000
Q95.3 Balanced sex/autosomal rearrangement in abnormal individual	0.002	0.998	0.000
Q95.2 Balanced autosomal rearrangement in abnormal individual	0.002	0.998	0.000
Q95.1 Chromosome inversion in normal individual	0.002	0.998	0.000
Q95.0 Balanced translocation and insertion in normal individual	0.002	0.998	0.000
Q97.9 Sex chromosome abnormality, female phenotype, unspecified	0.002	0.998	0.000
Q97.8 Other specified sex chromosome abnormalities, female phenotype	0.002	0.998	0.000
Q97.3 Female with 46,XY karyotype	0.002	0.998	0.000
Q97.2 Mosaicism, lines with various numbers of X chromosomes	0.002	0.998	0.000
Q97.1 Female with more than three X chromosomes	0.002	0.998	0.000
Q97.0 Karyotype 47,XXX	0.002	0.998	0.000
Q54.0 Hypospadias, balanic	0.002	0.998	0.000
Q55.9 Congenital malformation of male genital organ, unspecified	0.002	0.998	0.000
Q55.8 Other specified congenital malformations of male genital organs	0.002	0.998	0.000
Q55.5 Congenital absence and aplasia of penis	0.002	0.998	0.000
Q55.4 Other congenital malformations of vas deferens, epididymis, seminal vesicles and prostate	0.002	0.998	0.000

This table lists the top 500 terms ordered by p(effect).

The full results table can be downloaded from this page.

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Variant-specific associations