TreeWAS – [N43.4] Spermatocele

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs28459338 lBF = `6.27018` Chr`15` : `67,097,927`	0.653	0.347	0.000
rs117040525 lBF = `29.602` Chr`15` : `36,563,570`	0.637	0.363	0.000
rs77145174 lBF = `21.2117` Chr`15` : `57,177,676`	0.550	0.450	0.000
rs1834640 lBF = `8.70364` Chr`15` : `48,392,165`	0.537	0.463	0.000
rs8033755 lBF = `6.27132` Chr`15` : `28,381,546`	0.500	0.500	0.000
rs78425542 lBF = `16.392` Chr`15` : `69,399,885`	0.495	0.504	0.000
rs75905933 lBF = `1.53062` Chr`15` : `31,548,996`	0.487	0.513	0.000
rs75660786 lBF = `15.6938` Chr`15` : `96,161,741`	0.478	0.522	0.000
rs12593811 lBF = `5.9761` Chr`15` : `101,721,892`	0.466	0.533	0.000
rs17238859 lBF = `22.6845` Chr`15` : `56,957,179`	0.461	0.539	0.000
rs75034815 lBF = `18.297` Chr`15` : `31,315,963`	0.443	0.557	0.000
rs74752048 lBF = `15.608` Chr`15` : `50,060,632`	0.415	0.585	0.000
rs691655 lBF = `19.4694` Chr`15` : `50,020,318`	0.412	0.588	0.000
rs114897391 lBF = `14.311` Chr`15` : `96,065,019`	0.402	0.598	0.000
rs17522649 lBF = `26.3622` Chr`15` : `93,084,746`	0.372	0.627	0.000
rs117206795 lBF = `31.2014` Chr`15` : `67,270,650`	0.362	0.638	0.000
rs75683534 lBF = `22.4278` Chr`15` : `65,116,390`	0.351	0.649	0.000
rs183775327 lBF = `14.3545` Chr`15` : `67,274,514`	0.344	0.656	0.000
rs192229215 lBF = `1.12807` Chr`15` : `48,048,566`	0.317	0.683	0.000
rs113652541 lBF = `18.6299` Chr`15` : `53,573,692`	0.310	0.689	0.000
rs11634027 lBF = `15.0934` Chr`15` : `26,637,415`	0.296	0.704	0.000
rs149916999 lBF = `5.74278` Chr`15` : `31,408,269`	0.294	0.706	0.000
rs1426654 lBF = `0.663903` Chr`15` : `48,426,484`	0.290	0.710	0.000
rs34069323 lBF = `7.33643` Chr`15` : `85,187,245`	0.265	0.734	0.000
rs118020484 lBF = `8.51253` Chr`15` : `56,818,990`	0.263	0.736	0.000
Affx-52173688 lBF = `17.4903` Chr`15` : `99,671,741`	0.256	0.743	0.000
rs144442299 lBF = `5.60539` Chr`15` : `54,295,192`	0.234	0.765	0.000
rs117654141 lBF = `19.1486` Chr`15` : `38,120,376`	0.233	0.767	0.000
rs117023793 lBF = `15.2441` Chr`15` : `32,065,095`	0.228	0.771	0.000
rs74850597 lBF = `17.1584` Chr`15` : `98,129,804`	0.225	0.774	0.000
rs76954458 lBF = `13.8611` Chr`15` : `35,189,409`	0.222	0.777	0.000
rs8036080 lBF = `3.38637` Chr`15` : `41,196,384`	0.217	0.783	0.000
rs56190744 lBF = `18.1608` Chr`15` : `78,170,282`	0.215	0.785	0.000
rs112232665 lBF = `16.6494` Chr`15` : `85,869,137`	0.211	0.789	0.000
rs117207033 lBF = `17.1989` Chr`15` : `97,116,274`	0.206	0.794	0.000
rs62012778 lBF = `9.84005` Chr`15` : `63,873,443`	0.197	0.803	0.000
rs74651669 lBF = `14.1557` Chr`15` : `87,206,617`	0.191	0.809	0.000
rs72727381 lBF = `15.1333` Chr`15` : `38,823,527`	0.184	0.815	0.000
rs79774432 lBF = `14.4188` Chr`15` : `38,172,034`	0.184	0.816	0.000
rs72763071 lBF = `14.1776` Chr`15` : `101,347,950`	0.173	0.827	0.000
rs10520638 lBF = `2.90698` Chr`15` : `87,253,534`	0.171	0.829	0.000
rs17647114 lBF = `1.90052` Chr`15` : `87,436,745`	0.166	0.834	0.000
rs2965324 lBF = `13.1575` Chr`15` : `48,274,460`	0.164	0.835	0.000
rs7179400 lBF = `8.3148` Chr`15` : `94,739,583`	0.160	0.840	0.000
rs117231330 lBF = `14.3463` Chr`15` : `81,214,019`	0.159	0.841	0.000
rs77457385 lBF = `15.4395` Chr`15` : `69,979,587`	0.159	0.841	0.000
rs75668017 lBF = `16.6332` Chr`15` : `94,960,358`	0.147	0.853	0.000
rs116448368 lBF = `23.9738` Chr`15` : `52,600,590`	0.144	0.856	0.000
rs79336250 lBF = `15.5463` Chr`15` : `57,308,475`	0.144	0.856	0.000
rs62002515 lBF = `10.786` Chr`15` : `59,296,838`	0.136	0.864	0.000
rs3825776 lBF = `0.0522335` Chr`15` : `58,746,830`	0.000	0.879	0.121
rs2965313 lBF = `14.0878` Chr`15` : `48,241,505`	0.119	0.880	0.001
rs785427 lBF = `9.18741` Chr`15` : `30,182,766`	0.119	0.881	0.000
rs79434560 lBF = `18.5118` Chr`15` : `67,049,150`	0.113	0.887	0.000
rs2233070 lBF = `23.8275` Chr`15` : `23,889,739`	0.110	0.889	0.001
rs6576557 lBF = `17.711` Chr`15` : `26,540,811`	0.097	0.903	0.000
rs78820411 lBF = `24.1897` Chr`15` : `26,478,903`	0.097	0.903	0.000
rs118056006 lBF = `8.25296` Chr`15` : `60,087,231`	0.094	0.906	0.000
rs12909281 lBF = `12.1942` Chr`15` : `33,345,389`	0.093	0.906	0.000
rs117508732 lBF = `10.2984` Chr`15` : `67,824,170`	0.083	0.916	0.000
rs16966389 lBF = `0.121312` Chr`15` : `38,464,874`	0.079	0.920	0.000
rs117932080 lBF = `25.9049` Chr`15` : `93,875,227`	0.070	0.930	0.000
rs72655652 lBF = `20.5631` Chr`15` : `92,647,684`	0.063	0.937	0.000
rs3784589 lBF = `6.65828` Chr`15` : `31,294,714`	0.058	0.942	0.000
rs12900158 lBF = `1.30405` Chr`15` : `47,879,627`	0.056	0.944	0.000
rs117473873 lBF = `9.65269` Chr`15` : `53,024,679`	0.053	0.947	0.000
rs4575512 lBF = `12.8191` Chr`15` : `97,941,122`	0.051	0.948	0.000
rs147577476 lBF = `13.9193` Chr`15` : `60,432,921`	0.048	0.952	0.000
rs12898290 lBF = `8.08103` Chr`15` : `31,294,343`	0.046	0.953	0.000
rs17819946 lBF = `15.2912` Chr`15` : `57,428,671`	0.045	0.955	0.000
rs72732571 lBF = `15.1337` Chr`15` : `78,424,369`	0.042	0.958	0.000
rs75334015 lBF = `17.4139` Chr`15` : `40,551,636`	0.039	0.961	0.001
rs72744450 lBF = `6.48395` Chr`15` : `66,432,798`	0.039	0.961	0.000
rs539901 lBF = `0.0507584` Chr`15` : `58,674,669`	0.038	0.962	0.000
rs74850413 lBF = `11.8512` Chr`15` : `98,258,859`	0.038	0.962	0.000
rs76280009 lBF = `6.73436` Chr`15` : `30,228,071`	0.035	0.964	0.000
rs117486084 lBF = `13.6827` Chr`15` : `27,086,879`	0.035	0.965	0.000
rs138117236 lBF = `16.8457` Chr`15` : `83,309,422`	0.029	0.971	0.000
rs7170930 lBF = `4.48048` Chr`15` : `66,580,853`	0.029	0.971	0.000
rs117458067 lBF = `15.4786` Chr`15` : `61,951,318`	0.028	0.972	0.000
rs35216196 lBF = `26.0859` Chr`15` : `38,193,234`	0.026	0.974	0.000
rs116299775 lBF = `29.8285` Chr`15` : `91,445,276`	0.026	0.974	0.000
rs28479400 lBF = `4.3492` Chr`15` : `99,995,884`	0.026	0.974	0.000
rs2433610 lBF = `0.0435733` Chr`15` : `45,686,091`	0.024	0.976	0.000
rs1916149 lBF = `16.6286` Chr`15` : `38,464,431`	0.022	0.978	0.000
rs117598275 lBF = `13.4863` Chr`15` : `26,580,611`	0.018	0.982	0.000
rs117209336 lBF = `10.1195` Chr`15` : `32,945,748`	0.018	0.982	0.000
rs16977508 lBF = `17.5006` Chr`15` : `57,743,603`	0.017	0.983	0.000
rs1847246 lBF = `13.224` Chr`15` : `82,323,786`	0.017	0.983	0.000
rs78275630 lBF = `11.943` Chr`15` : `58,202,985`	0.016	0.984	0.000
rs35501570 lBF = `8.91191` Chr`15` : `37,965,898`	0.016	0.984	0.000
rs7174755 lBF = `-0.0365078` Chr`15` : `68,597,127`	0.016	0.984	0.000
rs148060237 lBF = `12.4871` Chr`15` : `72,180,440`	0.016	0.984	0.000
rs12901682 lBF = `2.81371` Chr`15` : `78,833,223`	0.015	0.985	0.000
rs117599750 lBF = `11.7875` Chr`15` : `40,091,332`	0.015	0.985	0.000
rs77603112 lBF = `33.2101` Chr`15` : `47,488,446`	0.014	0.986	0.000
rs141308780 lBF = `0.577437` Chr`15` : `84,260,542`	0.011	0.988	0.001
rs339978 lBF = `5.5937` Chr`15` : `60,937,402`	0.011	0.989	0.001
rs117133403 lBF = `17.8134` Chr`15` : `49,823,391`	0.011	0.989	0.000
rs6493271 lBF = `2.09238` Chr`15` : `47,613,593`	0.010	0.989	0.000
rs2174866 lBF = `0.0143718` Chr`15` : `53,464,220`	0.009	0.991	0.000
rs28602670 lBF = `0.0139218` Chr`15` : `78,768,167`	0.008	0.991	0.000
rs28414670 lBF = `16.6255` Chr`15` : `96,000,620`	0.008	0.992	0.000
rs1878186 lBF = `0.0132574` Chr`15` : `48,508,400`	0.000	0.992	0.007
rs12910916 lBF = `24.3202` Chr`15` : `47,675,655`	0.007	0.992	0.000
rs146797905 lBF = `0.0376606` Chr`15` : `88,758,574`	0.007	0.993	0.000
rs80184563 lBF = `6.16302` Chr`15` : `79,151,207`	0.006	0.993	0.000
rs10851371 lBF = `35.9133` Chr`15` : `39,224,945`	0.006	0.994	0.001
rs150844304 lBF = `10.501` Chr`15` : `43,726,625`	0.006	0.994	0.000
rs118036322 lBF = `17.3823` Chr`15` : `54,331,986`	0.005	0.994	0.001
rs16953998 lBF = `15.2931` Chr`15` : `70,264,186`	0.005	0.994	0.000
rs138570705 lBF = `3.70168` Chr`15` : `44,266,730`	0.005	0.994	0.000
rs28392903 lBF = `14.0654` Chr`15` : `26,106,644`	0.005	0.994	0.000
Affx-12152382 lBF = `7.18149` Chr`15` : `89,745,122`	0.005	0.995	0.000
rs2222656 lBF = `0.00626451` Chr`15` : `52,773,023`	0.005	0.995	0.000
rs62009784 lBF = `6.38483` Chr`15` : `49,494,566`	0.005	0.995	0.000
rs74609360 lBF = `1.8041` Chr`15` : `31,540,395`	0.004	0.996	0.000
rs2636061 lBF = `0.00507292` Chr`15` : `29,424,755`	0.004	0.996	0.000
rs56702977 lBF = `-0.0540625` Chr`15` : `42,671,308`	0.004	0.996	0.000
rs76918861 lBF = `18.3265` Chr`15` : `72,847,656`	0.004	0.996	0.000
rs3743266 lBF = `0.0106142` Chr`15` : `60,781,513`	0.004	0.996	0.000
rs3924426 lBF = `0.00594985` Chr`15` : `92,445,873`	0.004	0.996	0.000
rs4606657 lBF = `14.3358` Chr`15` : `61,601,952`	0.003	0.996	0.001
rs487836 lBF = `0.00557908` Chr`15` : `58,033,859`	0.003	0.997	0.000
rs17269740 lBF = `11.1226` Chr`15` : `59,998,058`	0.003	0.997	0.000
rs77701960 lBF = `10.9141` Chr`15` : `82,075,642`	0.003	0.997	0.000
rs113223489 lBF = `11.3029` Chr`15` : `64,262,688`	0.003	0.997	0.000
rs566767 lBF = `0.00288706` Chr`15` : `58,082,367`	0.000	0.997	0.003
rs117655850 lBF = `10.086` Chr`15` : `87,222,097`	0.002	0.998	0.001
rs16957709 lBF = `0.00753887` Chr`15` : `43,702,948`	0.000	0.998	0.002
rs6493206 lBF = `0.00251152` Chr`15` : `46,569,466`	0.002	0.998	0.000
rs117803799 lBF = `13.8032` Chr`15` : `59,431,200`	0.002	0.998	0.000
rs4776997 lBF = `-0.0588064` Chr`15` : `68,150,923`	0.002	0.998	0.000
rs78236847 lBF = `19.6533` Chr`15` : `33,294,717`	0.002	0.998	0.000
rs9920506 lBF = `6.44917` Chr`15` : `78,931,057`	0.002	0.998	0.000
rs7182209 lBF = `0.00272839` Chr`15` : `46,132,501`	0.002	0.998	0.000
rs55742391 lBF = `8.79257` Chr`15` : `66,061,627`	0.002	0.998	0.000
rs10162694 lBF = `0.00227465` Chr`15` : `35,346,541`	0.002	0.998	0.000
rs75706966 lBF = `7.51714` Chr`15` : `33,377,057`	0.002	0.998	0.000
rs2030062 lBF = `-0.0209084` Chr`15` : `25,133,986`	0.002	0.998	0.000
rs607541 lBF = `0.0507299` Chr`15` : `45,934,869`	0.002	0.998	0.000
rs3934516 lBF = `7.69858` Chr`15` : `61,603,979`	0.001	0.998	0.001
rs28502093 lBF = `12.5607` Chr`15` : `78,024,644`	0.001	0.998	0.001
rs12101657 lBF = `11.5945` Chr`15` : `49,043,765`	0.002	0.998	0.000
rs2250402 lBF = `-0.0202885` Chr`15` : `40,322,552`	0.000	0.998	0.002
rs2414059 lBF = `-0.0442451` Chr`15` : `50,873,344`	0.001	0.998	0.000
rs3105593 lBF = `-0.0296579` Chr`15` : `50,845,018`	0.001	0.998	0.000
rs894157 lBF = `0.126746` Chr`15` : `90,168,108`	0.001	0.998	0.000
rs746265 lBF = `0.018784` Chr`15` : `39,576,560`	0.001	0.998	0.000
rs2414739 lBF = `0.0198079` Chr`15` : `61,994,134`	0.001	0.998	0.000
rs12595668 lBF = `0.0164871` Chr`15` : `39,573,535`	0.001	0.998	0.000
rs765787 lBF = `-0.0573734` Chr`15` : `45,500,047`	0.000	0.998	0.001
rs1445021 lBF = `0.00043097` Chr`15` : `68,735,586`	0.001	0.999	0.000
rs12900968 lBF = `10.5004` Chr`15` : `58,108,764`	0.001	0.999	0.001
rs17536527 lBF = `0.0983696` Chr`15` : `45,719,187`	0.001	0.999	0.000
rs17487223 lBF = `29.7655` Chr`15` : `78,923,987`	0.001	0.999	0.000
rs12902421 lBF = `0.135383` Chr`15` : `72,161,403`	0.001	0.999	0.000
rs6576507 lBF = `0.00076318` Chr`15` : `26,288,394`	0.001	0.999	0.000
rs10518960 lBF = `17.1635` Chr`15` : `45,334,829`	0.001	0.999	0.000
rs75421114 lBF = `9.7401` Chr`15` : `98,217,518`	0.001	0.999	0.000
rs28377390 lBF = `-0.0104245` Chr`15` : `97,740,738`	0.001	0.999	0.000
rs10519203 lBF = `35.4283` Chr`15` : `78,814,046`	0.001	0.999	0.000
rs117267308 lBF = `0.118699` Chr`15` : `63,346,376`	0.001	0.999	0.000
rs2869548 lBF = `30.3012` Chr`15` : `78,922,638`	0.001	0.999	0.000
rs2398162 lBF = `-0.00139307` Chr`15` : `96,830,550`	0.000	0.999	0.001
rs8042849 lBF = `34.3643` Chr`15` : `78,817,929`	0.000	0.999	0.001
rs4432245 lBF = `0.0990814` Chr`15` : `40,324,481`	0.001	0.999	0.000
rs17815774 lBF = `0.0169403` Chr`15` : `31,334,362`	0.001	0.999	0.000
rs2052702 lBF = `0.00061283` Chr`15` : `69,989,505`	0.001	0.999	0.000
rs1317286 lBF = `34.488` Chr`15` : `78,896,129`	0.001	0.999	0.000
rs10518765 lBF = `-0.0378225` Chr`15` : `54,680,632`	0.001	0.999	0.000
rs1051730 lBF = `32.0934` Chr`15` : `78,894,339`	0.001	0.999	0.000
rs56077333 lBF = `35.5067` Chr`15` : `78,899,003`	0.001	0.999	0.000
rs8039449 lBF = `31.2562` Chr`15` : `78,914,534`	0.001	0.999	0.000
rs187775 lBF = `8.50037` Chr`15` : `58,677,895`	0.001	0.999	0.000
rs4984460 lBF = `-0.0152318` Chr`15` : `96,424,399`	0.001	0.999	0.000
rs28459416 lBF = `7.94577` Chr`15` : `99,561,550`	0.001	0.999	0.000
rs16976033 lBF = `0.0002612` Chr`15` : `55,456,510`	0.001	0.999	0.000
rs148024591 lBF = `0.00024579` Chr`15` : `93,914,451`	0.001	0.999	0.000
rs931794 lBF = `32.9732` Chr`15` : `78,826,180`	0.001	0.999	0.000
rs1442808 lBF = `0.0006366` Chr`15` : `98,764,847`	0.001	0.999	0.000
rs1513859 lBF = `0.00002134` Chr`15` : `97,750,335`	0.001	0.999	0.000
rs16969968 lBF = `35.0833` Chr`15` : `78,882,925`	0.001	0.999	0.000
rs8040868 lBF = `34.6813` Chr`15` : `78,911,181`	0.001	0.999	0.000
rs7180002 lBF = `32.6488` Chr`15` : `78,873,993`	0.001	0.999	0.000
rs80332023 lBF = `0.00037071` Chr`15` : `101,073,444`	0.000	0.999	0.001
rs12440825 lBF = `0.00015619` Chr`15` : `85,223,403`	0.001	0.999	0.001
rs281229 lBF = `0.0001434` Chr`15` : `47,718,455`	0.001	0.999	0.000
rs7164035 lBF = `0.00010418` Chr`15` : `58,102,241`	0.001	0.999	0.000
rs8025093 lBF = `0.00007081` Chr`15` : `25,602,950`	0.001	0.999	0.000
rs891288 lBF = `0.00004609` Chr`15` : `85,377,015`	0.001	0.999	0.000
rs75393192 lBF = `0.00004102` Chr`15` : `75,870,551`	0.001	0.999	0.000
rs190065944 lBF = `0.0000287` Chr`15` : `78,859,610`	0.001	0.999	0.000
rs57017013 lBF = `0.00000415` Chr`15` : `63,891,961`	0.001	0.999	0.000
rs145330511 lBF = `0` Chr`15` : `58,100,592`	0.001	0.999	0.001
rs147415896 lBF = `0` Chr`15` : `92,626,515`	0.001	0.999	0.001
rs4775302 lBF = `0` Chr`15` : `46,639,808`	0.001	0.999	0.001
rs16961557 lBF = `0` Chr`15` : `49,048,128`	0.001	0.999	0.001
rs149074315 lBF = `0` Chr`15` : `58,088,889`	0.001	0.999	0.001
rs60283548 lBF = `0` Chr`15` : `97,454,880`	0.001	0.999	0.001
rs144587541 lBF = `0` Chr`15` : `80,919,708`	0.001	0.999	0.001
rs1378214 lBF = `0` Chr`15` : `47,579,004`	0.001	0.999	0.001
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rs4887086 lBF = `12.9948` Chr`15` : `79,026,529`	0.000	0.999	0.000
rs4886587 lBF = `12.9685` Chr`15` : `79,026,822`	0.000	0.999	0.000
rs1825082 lBF = `12.968` Chr`15` : `79,023,433`	0.000	0.999	0.000
rs4886586 lBF = `12.8964` Chr`15` : `79,026,674`	0.000	0.999	0.000
rs11639181 lBF = `12.8441` Chr`15` : `79,024,016`	0.000	0.999	0.000
rs11639382 lBF = `12.7981` Chr`15` : `79,024,268`	0.000	0.999	0.000
rs11639375 lBF = `12.7979` Chr`15` : `79,024,214`	0.000	0.999	0.000
rs2869561 lBF = `12.7931` Chr`15` : `79,025,516`	0.000	0.999	0.000
rs11639347 lBF = `12.7116` Chr`15` : `79,024,350`	0.000	0.999	0.000
rs11639049 lBF = `12.6971` Chr`15` : `79,023,730`	0.000	0.999	0.000
rs11639166 lBF = `12.6714` Chr`15` : `79,023,766`	0.000	0.999	0.000
rs8027972 lBF = `12.657` Chr`15` : `79,022,615`	0.000	0.999	0.000
rs4886579 lBF = `11.3251` Chr`15` : `78,969,256`	0.000	0.999	0.000
rs75367305 lBF = `9.30397` Chr`15` : `74,511,630`	0.000	0.999	0.000
rs62020330 lBF = `7.2423` Chr`15` : `50,562,847`	0.000	0.999	0.000
rs16942556 lBF = `0.0682052` Chr`15` : `60,687,251`	0.000	0.999	0.000
rs12913538 lBF = `-0.00548122` Chr`15` : `62,899,160`	0.000	0.999	0.000
rs4780144 lBF = `-0.00553324` Chr`15` : `33,954,652`	0.000	0.999	0.000
rs16957063 lBF = `-0.00645364` Chr`15` : `42,984,288`	0.000	0.999	0.000
rs16973225 lBF = `-0.0381046` Chr`15` : `82,229,999`	0.000	0.999	0.000
rs11857380 lBF = `-0.057484` Chr`15` : `58,712,203`	0.000	0.999	0.000
rs11247230 lBF = `-0.0945302` Chr`15` : `101,197,005`	0.000	0.999	0.000
rs55781567 lBF = `35.7647` Chr`15` : `78,857,986`	0.000	1.000	0.000
rs2036527 lBF = `35.645` Chr`15` : `78,851,615`	0.000	1.000	0.000
rs75312808 lBF = `17.1131` Chr`15` : `47,918,724`	0.000	1.000	0.000
rs4887087 lBF = `13.2234` Chr`15` : `79,026,541`	0.000	1.000	0.000
rs3971859 lBF = `12.95` Chr`15` : `79,026,277`	0.000	1.000	0.000
rs3971860 lBF = `12.95` Chr`15` : `79,026,278`	0.000	1.000	0.000
rs11639372 lBF = `11.9211` Chr`15` : `78,966,655`	0.000	1.000	0.000
rs11072785 lBF = `11.9144` Chr`15` : `78,968,229`	0.000	1.000	0.000
rs12902602 lBF = `11.8843` Chr`15` : `78,967,401`	0.000	1.000	0.000
rs1021071 lBF = `11.7` Chr`15` : `78,968,179`	0.000	1.000	0.000
rs4886580 lBF = `11.1907` Chr`15` : `78,969,385`	0.000	1.000	0.000
rs11638830 lBF = `10.8043` Chr`15` : `78,948,319`	0.000	1.000	0.000
rs2170311 lBF = `10.7953` Chr`15` : `78,947,611`	0.000	1.000	0.000
rs12899135 lBF = `10.7834` Chr`15` : `78,954,379`	0.000	1.000	0.000
rs1996371 lBF = `10.4683` Chr`15` : `78,956,806`	0.000	1.000	0.000
rs16951275 lBF = `0.538361` Chr`15` : `68,077,168`	0.000	1.000	0.000
rs16977195 lBF = `0.0635692` Chr`15` : `86,984,240`	0.000	1.000	0.000
rs7172677 lBF = `-0.00712931` Chr`15` : `75,424,593`	0.000	1.000	0.000
rs16957091 lBF = `-0.0341839` Chr`15` : `43,017,426`	0.000	1.000	0.000
rs11072566 lBF = `-0.0530728` Chr`15` : `76,293,971`	0.000	1.000	0.000
rs4923705 lBF = `-0.0532717` Chr`15` : `36,293,605`	0.000	1.000	0.000
rs4984390 lBF = `-0.0722172` Chr`15` : `94,939,508`	0.000	1.000	0.000
rs6495314 lBF = `11.5014` Chr`15` : `78,960,529`	0.000	1.000	0.000
rs11633178 lBF = `10.7181` Chr`15` : `78,944,538`	0.000	1.000	0.000
rs17294280 lBF = `9.90458` Chr`15` : `67,468,285`	0.000	1.000	0.000
rs3813567 lBF = `9.05806` Chr`15` : `78,934,551`	0.000	1.000	0.000
rs7178572 lBF = `1.57898` Chr`15` : `77,747,190`	0.000	1.000	0.000
rs2241423 lBF = `0.595588` Chr`15` : `68,086,838`	0.000	1.000	0.000
rs8028313 lBF = `0.549074` Chr`15` : `68,043,057`	0.000	1.000	0.000
rs2306786 lBF = `0.389908` Chr`15` : `59,487,930`	0.000	1.000	0.000
rs4774830 lBF = `0.283711` Chr`15` : `56,116,231`	0.000	1.000	0.000
rs6495785 lBF = `0.214074` Chr`15` : `35,858,583`	0.000	1.000	0.000
rs2446422 lBF = `0.069627` Chr`15` : `51,634,486`	0.000	1.000	0.000
rs2929282 lBF = `0.0682501` Chr`15` : `44,245,931`	0.000	1.000	0.000
rs8025470 lBF = `0.0513822` Chr`15` : `33,528,268`	0.000	1.000	0.000
rs748404 lBF = `0.0377332` Chr`15` : `43,559,231`	0.000	1.000	0.000
rs7181230 lBF = `0.0270022` Chr`15` : `40,360,741`	0.000	1.000	0.000
rs55966621 lBF = `0.0109487` Chr`15` : `81,137,076`	0.000	1.000	0.000
rs142453246 lBF = `0.00836791` Chr`15` : `49,154,718`	0.000	1.000	0.000
rs12916361 lBF = `-0.00455652` Chr`15` : `81,238,045`	0.000	1.000	0.000
rs2412710 lBF = `-0.00629692` Chr`15` : `42,683,787`	0.000	1.000	0.000
rs1559831 lBF = `-0.0109718` Chr`15` : `39,136,304`	0.000	1.000	0.000
rs4589502 lBF = `-0.0250825` Chr`15` : `67,155,069`	0.000	1.000	0.000
rs6598266 lBF = `-0.0265201` Chr`15` : `100,299,239`	0.000	1.000	0.000
rs4778214 lBF = `-0.0310089` Chr`15` : `28,205,564`	0.000	1.000	0.000
rs2572207 lBF = `-0.0391057` Chr`15` : `66,070,693`	0.000	1.000	0.000
rs7179456 lBF = `-0.0798496` Chr`15` : `59,174,539`	0.000	1.000	0.000
rs17541406 lBF = `-0.0948821` Chr`15` : `93,889,459`	0.000	1.000	0.000
rs72733851 lBF = `13.422` Chr`15` : `47,804,552`	0.000	1.000	0.000
rs11634351 lBF = `10.8007` Chr`15` : `78,944,718`	0.000	1.000	0.000
rs12591650 lBF = `0.484151` Chr`15` : `61,060,707`	0.000	1.000	0.000
rs8038734 lBF = `0.0651081` Chr`15` : `72,811,402`	0.000	1.000	0.000
rs74615166 lBF = `0.0643944` Chr`15` : `64,725,490`	0.000	1.000	0.000
rs78539969 lBF = `0.0364231` Chr`15` : `39,347,046`	0.000	1.000	0.000
rs141668138 lBF = `0.014285` Chr`15` : `80,599,536`	0.000	1.000	0.000
rs76065397 lBF = `0.0130401` Chr`15` : `36,196,925`	0.000	1.000	0.000
rs311904 lBF = `-0.00265258` Chr`15` : `69,346,946`	0.000	1.000	0.000
rs1258767 lBF = `-0.0148593` Chr`15` : `33,126,454`	0.000	1.000	0.000
rs7164923 lBF = `-0.0306374` Chr`15` : `24,062,915`	0.000	1.000	0.000
rs74874915 lBF = `-0.0431296` Chr`15` : `91,387,379`	0.000	1.000	0.000
rs291028 lBF = `-0.0458076` Chr`15` : `95,615,786`	0.000	1.000	0.000
rs1105881 lBF = `-0.0466662` Chr`15` : `42,072,530`	0.000	1.000	0.000
rs207954 lBF = `-0.0656915` Chr`15` : `92,657,373`	0.000	1.000	0.000
rs4965593 lBF = `-0.0671532` Chr`15` : `100,758,385`	0.000	1.000	0.000
rs11635085 lBF = `-0.0849679` Chr`15` : `93,046,636`	0.000	1.000	0.000
rs11633886 lBF = `-0.0943819` Chr`15` : `46,078,307`	0.000	1.000	0.000
rs11637445 lBF = `-0.106417` Chr`15` : `67,991,606`	0.000	1.000	0.000
rs12593950 lBF = `17.8006` Chr`15` : `78,920,935`	0.000	1.000	0.000
rs28534575 lBF = `17.1451` Chr`15` : `78,923,845`	0.000	1.000	0.000
rs146125856 lBF = `12.7409` Chr`15` : `50,784,990`	0.000	1.000	0.000
rs4887113 lBF = `10.8073` Chr`15` : `79,095,287`	0.000	1.000	0.000
rs4420500 lBF = `10.4486` Chr`15` : `78,962,964`	0.000	1.000	0.000
rs12441664 lBF = `1.2249` Chr`15` : `97,714,534`	0.000	1.000	0.000
rs7172971 lBF = `0.238389` Chr`15` : `42,332,616`	0.000	1.000	0.000
rs10519210 lBF = `0.109365` Chr`15` : `63,737,925`	0.000	1.000	0.000
rs6494537 lBF = `0.067618` Chr`15` : `66,051,345`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.6734

Cluster X0317

log Bayes Factor = 95.4365

contains 2 variants

0.3323

Cluster X0289

log Bayes Factor = 60.4564

contains 1 variants

0.1805

Cluster X0333

log Bayes Factor = 38.671

contains 2 variants

0.1026

Cluster X0335

log Bayes Factor = 12.3689

contains 1 variants

0.0632

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0126

log Bayes Factor = 384.432

contains 15 variants

0.8417

Cluster X0225

log Bayes Factor = 36.4143

contains 3 variants

0.7971

Cluster X0091

log Bayes Factor = 303.64

contains 12 variants

0.7166

Cluster X0141

log Bayes Factor = 742.063

contains 30 variants

0.6461

Cluster X0166

log Bayes Factor = 230.746

contains 8 variants

0.6183

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.5862

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.5640

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.5350

Cluster X0325

log Bayes Factor = 58.453

contains 4 variants

0.5327

Cluster X0122

log Bayes Factor = 219.114

contains 9 variants

0.5152

Cluster X0155

log Bayes Factor = 348.568

contains 12 variants

0.4810

Cluster X0029

log Bayes Factor = 709.102

contains 23 variants

0.4497

Cluster X0042

log Bayes Factor = 307.243

contains 12 variants

0.4449

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.3982

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.3861

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.3848

Cluster X0172

log Bayes Factor = 80.2701

contains 3 variants

0.3841

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.3723

Cluster X0288

log Bayes Factor = 92.1513

contains 2 variants

0.3581

Cluster X0004

log Bayes Factor = 32.8452

contains 2 variants

0.3287

Cluster X0098

log Bayes Factor = 246.226

contains 8 variants

0.3233

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.3199

Cluster X0237

log Bayes Factor = 123.902

contains 6 variants

0.3174

Cluster X0210

log Bayes Factor = 426.159

contains 17 variants

0.3138

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.3123

Cluster X0081

log Bayes Factor = 278.568

contains 10 variants

0.3038

Cluster X0119

log Bayes Factor = 114.358

contains 6 variants

0.3017

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.3006

Cluster X0274

log Bayes Factor = 454.783

contains 18 variants

0.3001

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.2995

Cluster X0146

log Bayes Factor = 686.343

contains 22 variants

0.2994

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.2975

Cluster X0051

log Bayes Factor = 376.793

contains 14 variants

0.2962

Cluster X0043

log Bayes Factor = 517.108

contains 20 variants

0.2961

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.2957

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.2912

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.2886

Cluster X0173

log Bayes Factor = 654.164

contains 9 variants

0.2770

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.2729

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.2563

Cluster X0199

log Bayes Factor = 350.038

contains 3 variants

0.2471

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2396

Cluster X0213

log Bayes Factor = 405.918

contains 15 variants

0.2387

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.2376

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.2218

Cluster X0150

log Bayes Factor = 861.091

contains 26 variants

0.2203

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.2132

Cluster X0142

log Bayes Factor = 295.63

contains 12 variants

0.2092

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.1996

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.1984

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.1944

Cluster X0040

log Bayes Factor = 542.747

contains 16 variants

0.1936

Cluster X0145

log Bayes Factor = 274.587

contains 11 variants

0.1922

Cluster X0277

log Bayes Factor = 726.213

contains 23 variants

0.1875

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.1838

Cluster X0015

log Bayes Factor = 356.23

contains 15 variants

0.1837

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.1558

Cluster X0164

log Bayes Factor = 463.793

contains 16 variants

0.1462

Cluster X0231

log Bayes Factor = 82.3185

contains 5 variants

0.1440

Cluster X0170

log Bayes Factor = 264.081

contains 11 variants

0.1316

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.1295

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.1294

Cluster X0222

log Bayes Factor = 431.582

contains 17 variants

0.1286

Cluster X0049

log Bayes Factor = 597.061

contains 18 variants

0.1285

Cluster X0203

log Bayes Factor = 363.522

contains 11 variants

0.1283

Cluster X0224

log Bayes Factor = 278.692

contains 11 variants

0.1255

Cluster X0256

log Bayes Factor = 211.588

contains 9 variants

0.1218

Cluster X0201

log Bayes Factor = 368.049

contains 13 variants

0.1213

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.1037

Cluster X0020

log Bayes Factor = 557.721

contains 18 variants

0.1036

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.1014

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.0891

Cluster X0079

log Bayes Factor = 413.803

contains 22 variants

0.0887

Cluster X0021

log Bayes Factor = 338.631

contains 13 variants

0.0864

Cluster X0102

log Bayes Factor = 99.5678

contains 5 variants

0.0816

Cluster X0111

log Bayes Factor = 403.183

contains 18 variants

0.0779

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.0758

Cluster X0001

log Bayes Factor = 167.541

contains 7 variants

0.0743

Cluster X0088

log Bayes Factor = 243.609

contains 9 variants

0.0725

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.0694

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0664

Cluster X0074

log Bayes Factor = 353.38

contains 15 variants

0.0657

Cluster X0185

log Bayes Factor = 84.7127

contains 6 variants

0.0651

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0520

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)