TreeWAS – [N89.4] Leukoplakia of vagina

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs1075654 lBF = `23.1554` Chr`9` : `136,928,276`	0.702	0.297	0.000
rs10283576 lBF = `19.8492` Chr`9` : `88,106,667`	0.574	0.426	0.000
rs56190763 lBF = `13.9754` Chr`9` : `91,343,917`	0.554	0.446	0.000
rs72756269 lBF = `20.6952` Chr`9` : `119,147,710`	0.542	0.458	0.000
rs150484890 lBF = `2.77875` Chr`9` : `6,643,981`	0.515	0.485	0.000
rs72746681 lBF = `16.7306` Chr`9` : `88,643,632`	0.513	0.487	0.000
rs73644982 lBF = `13.9807` Chr`9` : `32,523,117`	0.513	0.487	0.000
rs12000567 lBF = `4.07403` Chr`9` : `789,499`	0.512	0.488	0.000
rs77322120 lBF = `13.2546` Chr`9` : `101,171,443`	0.505	0.495	0.000
rs117926975 lBF = `4.43495` Chr`9` : `97,358,141`	0.498	0.502	0.000
rs118142265 lBF = `1.58801` Chr`9` : `132,194,033`	0.000	0.507	0.493
rs11789912 lBF = `15.8406` Chr`9` : `130,605,739`	0.481	0.519	0.000
rs144087410 lBF = `1.81966` Chr`9` : `5,185,581`	0.480	0.520	0.000
rs138633335 lBF = `19.1105` Chr`9` : `137,459,325`	0.475	0.525	0.000
rs78199931 lBF = `17.2832` Chr`9` : `140,865,334`	0.464	0.536	0.000
rs62531470 lBF = `1.6886` Chr`9` : `540,319`	0.427	0.572	0.000
rs75585141 lBF = `14.4069` Chr`9` : `13,387,483`	0.397	0.602	0.000
rs16928280 lBF = `6.01786` Chr`9` : `8,695,233`	0.393	0.607	0.000
rs116929209 lBF = `23.964` Chr`9` : `13,692,166`	0.388	0.611	0.000
rs10114038 lBF = `1.31177` Chr`9` : `127,327,763`	0.387	0.613	0.000
rs147338646 lBF = `5.39391` Chr`9` : `11,812,813`	0.334	0.665	0.000
rs117196480 lBF = `16.5445` Chr`9` : `101,301,307`	0.331	0.668	0.000
rs142944815 lBF = `2.59871` Chr`9` : `8,773,566`	0.318	0.682	0.000
rs12336160 lBF = `0.996007` Chr`9` : `33,283,582`	0.306	0.693	0.000
rs7871607 lBF = `24.204` Chr`9` : `85,546,352`	0.285	0.715	0.000
rs35303200 lBF = `18.3789` Chr`9` : `82,740,305`	0.255	0.745	0.000
rs62574559 lBF = `13.3756` Chr`9` : `96,366,133`	0.235	0.764	0.001
rs60250264 lBF = `1.93414` Chr`9` : `8,897,187`	0.235	0.765	0.000
rs117869101 lBF = `21.0144` Chr`9` : `84,429,893`	0.234	0.766	0.000
rs75622023 lBF = `16.1719` Chr`9` : `28,607,634`	0.222	0.777	0.000
rs2150702 lBF = `0.399886` Chr`9` : `5,893,861`	0.193	0.807	0.000
rs117260909 lBF = `0.304807` Chr`9` : `3,195,775`	0.188	0.812	0.000
rs75445152 lBF = `16.2649` Chr`9` : `104,310,061`	0.151	0.849	0.000
rs184522131 lBF = `1.69043` Chr`9` : `90,177,521`	0.140	0.859	0.000
rs117754409 lBF = `15.5268` Chr`9` : `13,934,924`	0.138	0.861	0.000
rs74729480 lBF = `14.6486` Chr`9` : `137,375,254`	0.131	0.869	0.000
rs185095244 lBF = `0.251196` Chr`9` : `8,766,114`	0.123	0.876	0.000
rs116961907 lBF = `20.2002` Chr`9` : `28,511,184`	0.121	0.878	0.000
rs4979462 lBF = `0.196688` Chr`9` : `117,567,013`	0.119	0.880	0.000
rs62571477 lBF = `27.2395` Chr`9` : `137,865,056`	0.110	0.889	0.001
rs78925264 lBF = `0.599859` Chr`9` : `9,015,087`	0.100	0.900	0.000
rs76605533 lBF = `18.0219` Chr`9` : `100,624,553`	0.090	0.910	0.000
rs80001694 lBF = `12.7976` Chr`9` : `120,105,508`	0.077	0.923	0.000
rs7045620 lBF = `14.6764` Chr`9` : `137,836,809`	0.071	0.929	0.000
rs77911647 lBF = `25.709` Chr`9` : `37,580,543`	0.065	0.935	0.000
rs77418183 lBF = `12.5886` Chr`9` : `21,929,486`	0.064	0.936	0.000
rs78284770 lBF = `17.3311` Chr`9` : `91,652,587`	0.061	0.939	0.000
rs117217495 lBF = `16.3591` Chr`9` : `24,538,142`	0.058	0.942	0.000
rs1333005 lBF = `17.474` Chr`9` : `130,042,369`	0.058	0.942	0.000
rs7045640 lBF = `0.303315` Chr`9` : `2,978,377`	0.055	0.945	0.000
rs72745135 lBF = `15.0573` Chr`9` : `78,973,431`	0.050	0.950	0.000
rs117233030 lBF = `16.6065` Chr`9` : `14,348,774`	0.048	0.952	0.000
rs7852296 lBF = `1.12641` Chr`9` : `126,352,218`	0.047	0.953	0.000
rs80321149 lBF = `13.0616` Chr`9` : `16,150,000`	0.043	0.956	0.000
rs74732462 lBF = `7.95748` Chr`9` : `133,436,054`	0.042	0.958	0.000
rs913351 lBF = `10.5594` Chr`9` : `130,033,547`	0.042	0.958	0.000
rs56281909 lBF = `11.3432` Chr`9` : `4,418,821`	0.034	0.966	0.000
rs186821245 lBF = `0.265221` Chr`9` : `136,606,035`	0.034	0.966	0.000
rs1175605 lBF = `18.1644` Chr`9` : `95,233,248`	0.033	0.966	0.000
rs73387635 lBF = `15.4845` Chr`9` : `1,814,698`	0.032	0.968	0.000
rs117499721 lBF = `28.8784` Chr`9` : `116,579,948`	0.031	0.969	0.000
rs111571219 lBF = `14.5965` Chr`9` : `102,420,794`	0.027	0.973	0.000
rs77427150 lBF = `13.5234` Chr`9` : `101,239,130`	0.024	0.976	0.000
rs1329568 lBF = `0.024609` Chr`9` : `37,037,976`	0.000	0.977	0.023
rs118156051 lBF = `16.9077` Chr`9` : `103,381,388`	0.022	0.978	0.000
rs10813374 lBF = `0.0431441` Chr`9` : `30,879,675`	0.018	0.982	0.000
rs11506819 lBF = `12.1203` Chr`9` : `108,129,480`	0.017	0.983	0.000
rs10993738 lBF = `0.58737` Chr`9` : `93,633,240`	0.017	0.983	0.000
rs12378793 lBF = `6.11146` Chr`9` : `79,613,935`	0.015	0.985	0.000
rs41314453 lBF = `10.1695` Chr`9` : `136,307,825`	0.015	0.985	0.000
rs116995584 lBF = `15.4671` Chr`9` : `76,040,600`	0.002	0.985	0.013
rs111958418 lBF = `20.8287` Chr`9` : `22,219,565`	0.014	0.986	0.000
rs117932393 lBF = `0.0156868` Chr`9` : `109,152,709`	0.013	0.987	0.000
rs1038195 lBF = `18.4342` Chr`9` : `137,855,660`	0.013	0.987	0.001
rs12000457 lBF = `0.0170966` Chr`9` : `86,944,425`	0.013	0.987	0.000
rs7865516 lBF = `23.7461` Chr`9` : `16,113,134`	0.013	0.987	0.000
rs117415762 lBF = `13.5576` Chr`9` : `77,698,356`	0.012	0.988	0.000
rs78608331 lBF = `12.388` Chr`9` : `13,257,251`	0.011	0.989	0.000
rs74304768 lBF = `17.1946` Chr`9` : `79,606,878`	0.011	0.989	0.000
rs34634894 lBF = `20.2004` Chr`9` : `82,652,022`	0.009	0.991	0.000
rs17408309 lBF = `14.2638` Chr`9` : `71,632,265`	0.009	0.991	0.000
rs114646018 lBF = `0.00725446` Chr`9` : `18,890,061`	0.009	0.991	0.000
rs113607577 lBF = `0.0172672` Chr`9` : `77,455,459`	0.008	0.991	0.000
rs114356520 lBF = `0.0111969` Chr`9` : `112,128,998`	0.008	0.992	0.000
rs16924016 lBF = `0.0976692` Chr`9` : `100,511,331`	0.007	0.992	0.000
rs10491777 lBF = `15.847` Chr`9` : `14,352,001`	0.007	0.992	0.000
rs10115586 lBF = `0.0123159` Chr`9` : `120,559,011`	0.007	0.993	0.000
rs55760117 lBF = `18.9306` Chr`9` : `129,740,272`	0.007	0.993	0.000
rs872256 lBF = `-0.0466685` Chr`9` : `2,496,480`	0.000	0.993	0.007
rs118036720 lBF = `22.9077` Chr`9` : `5,408,587`	0.006	0.993	0.001
rs111873027 lBF = `0.00829232` Chr`9` : `126,953,640`	0.006	0.993	0.000
rs10815355 lBF = `0.00477494` Chr`9` : `622,523`	0.006	0.994	0.000
rs117593677 lBF = `14.7112` Chr`9` : `21,318,205`	0.006	0.994	0.000
rs72758841 lBF = `0.00678835` Chr`9` : `131,475,583`	0.006	0.994	0.000
rs79460104 lBF = `15.2248` Chr`9` : `79,610,628`	0.005	0.995	0.000
rs77437704 lBF = `13.6847` Chr`9` : `79,623,352`	0.005	0.995	0.000
rs117863381 lBF = `15.4135` Chr`9` : `82,517,509`	0.005	0.995	0.000
rs117540688 lBF = `12.0488` Chr`9` : `6,064,428`	0.005	0.995	0.000
rs76718115 lBF = `14.4603` Chr`9` : `112,413,997`	0.005	0.995	0.000
rs10961577 lBF = `0.0718727` Chr`9` : `14,562,314`	0.001	0.995	0.004
rs117120696 lBF = `20.1492` Chr`9` : `81,426,723`	0.005	0.995	0.000
rs58680346 lBF = `5.13866` Chr`9` : `7,604,965`	0.004	0.996	0.000
rs16925263 lBF = `17.4118` Chr`9` : `7,060,997`	0.004	0.996	0.000
rs76909134 lBF = `18.6929` Chr`9` : `138,798,380`	0.003	0.996	0.000
rs117362775 lBF = `13.8721` Chr`9` : `112,587,101`	0.004	0.996	0.000
rs7020651 lBF = `-0.060618` Chr`9` : `22,972,837`	0.000	0.996	0.004
rs41280725 lBF = `19.7128` Chr`9` : `5,469,654`	0.002	0.996	0.002
rs55721418 lBF = `20.0497` Chr`9` : `133,913,740`	0.004	0.996	0.000
rs142965926 lBF = `0.0469266` Chr`9` : `136,618,128`	0.003	0.996	0.000
rs7024058 lBF = `17.5874` Chr`9` : `1,938,082`	0.003	0.996	0.000
rs75059066 lBF = `5.824` Chr`9` : `14,373,551`	0.003	0.997	0.000
rs78119065 lBF = `14.991` Chr`9` : `1,833,972`	0.003	0.997	0.000
rs56065549 lBF = `11.9825` Chr`9` : `95,906,364`	0.003	0.997	0.000
rs10968749 lBF = `6.84227` Chr`9` : `28,752,484`	0.003	0.997	0.000
rs436582 lBF = `-0.024077` Chr`9` : `118,956,668`	0.003	0.997	0.000
rs79481790 lBF = `5.06567` Chr`9` : `73,702,520`	0.003	0.997	0.000
rs117571560 lBF = `14.6503` Chr`9` : `76,169,871`	0.001	0.997	0.002
rs140993796 lBF = `-0.00512351` Chr`9` : `111,536,356`	0.003	0.997	0.000
rs17857515 lBF = `18.2473` Chr`9` : `32,542,278`	0.002	0.997	0.001
rs7867456 lBF = `0.199375` Chr`9` : `21,035,307`	0.003	0.997	0.000
rs75004325 lBF = `14.3185` Chr`9` : `73,586,372`	0.003	0.997	0.000
rs10758732 lBF = `11.2727` Chr`9` : `5,991,772`	0.002	0.998	0.000
rs75125430 lBF = `16.6037` Chr`9` : `24,472,623`	0.002	0.998	0.001
rs17425572 lBF = `0.62179` Chr`9` : `88,006,338`	0.002	0.998	0.000
rs74759033 lBF = `10.8675` Chr`9` : `127,676,918`	0.002	0.998	0.000
rs12003072 lBF = `0.013909` Chr`9` : `86,771,161`	0.000	0.998	0.002
rs7870863 lBF = `1.63679` Chr`9` : `11,136,285`	0.000	0.998	0.002
rs117000167 lBF = `0.00350061` Chr`9` : `124,678,821`	0.002	0.998	0.000
rs116919233 lBF = `14.0946` Chr`9` : `119,991,655`	0.002	0.998	0.000
rs7864133 lBF = `0.00190717` Chr`9` : `84,053,686`	0.002	0.998	0.000
rs13288988 lBF = `0.636504` Chr`9` : `11,114,858`	0.000	0.998	0.002
rs139863644 lBF = `0.00339663` Chr`9` : `5,972,759`	0.002	0.998	0.000
rs77528658 lBF = `12.135` Chr`9` : `104,204,920`	0.002	0.998	0.000
rs3736986 lBF = `-0.0063385` Chr`9` : `36,194,569`	0.002	0.998	0.000
rs4877801 lBF = `12.8244` Chr`9` : `86,337,432`	0.002	0.998	0.000
rs76780579 lBF = `0.00258463` Chr`9` : `16,414,506`	0.001	0.998	0.000
rs78617806 lBF = `13.7235` Chr`9` : `109,377,753`	0.002	0.998	0.000
rs514209 lBF = `-0.0567767` Chr`9` : `77,342,815`	0.002	0.998	0.000
rs75087119 lBF = `17.2273` Chr`9` : `7,426,671`	0.001	0.998	0.000
rs17244432 lBF = `15.3075` Chr`9` : `139,801,662`	0.001	0.998	0.001
rs74308953 lBF = `0.00117694` Chr`9` : `121,431,189`	0.001	0.998	0.000
rs3812497 lBF = `6.67685` Chr`9` : `140,611,436`	0.000	0.998	0.001
rs7021404 lBF = `0.00087256` Chr`9` : `25,414,051`	0.001	0.998	0.000
rs111600634 lBF = `1.82236` Chr`9` : `120,618,625`	0.001	0.999	0.000
rs10988542 lBF = `0.542065` Chr`9` : `132,657,264`	0.000	0.999	0.001
rs10983554 lBF = `8.75815` Chr`9` : `119,918,601`	0.000	0.999	0.001
rs12342947 lBF = `20.0509` Chr`9` : `7,026,860`	0.001	0.999	0.000
rs182700414 lBF = `0.00117781` Chr`9` : `121,971,770`	0.001	0.999	0.000
rs187979858 lBF = `0.0135995` Chr`9` : `136,600,098`	0.001	0.999	0.000
rs12346945 lBF = `0.0003603` Chr`9` : `98,844,059`	0.001	0.999	0.000
rs145699582 lBF = `0.00035679` Chr`9` : `5,169,600`	0.001	0.999	0.000
rs10973964 lBF = `14.244` Chr`9` : `38,669,362`	0.000	0.999	0.001
rs914605 lBF = `14.0956` Chr`9` : `20,742,963`	0.001	0.999	0.000
rs76495380 lBF = `0.0004597` Chr`9` : `20,844,431`	0.001	0.999	0.000
rs79299247 lBF = `13.7264` Chr`9` : `82,970,155`	0.001	0.999	0.001
rs117488235 lBF = `19.2182` Chr`9` : `15,707,430`	0.000	0.999	0.001
rs76153552 lBF = `18.1323` Chr`9` : `95,913,866`	0.001	0.999	0.000
rs1463984 lBF = `0.220472` Chr`9` : `108,427,062`	0.001	0.999	0.000
rs1319535 lBF = `-0.076085` Chr`9` : `28,181,085`	0.001	0.999	0.000
rs3118667 lBF = `-0.119986` Chr`9` : `136,291,063`	0.000	0.999	0.001
rs16925898 lBF = `18.5128` Chr`9` : `10,372,027`	0.001	0.999	0.000
rs117520190 lBF = `16.2172` Chr`9` : `98,903,902`	0.001	0.999	0.000
rs4742971 lBF = `0.166645` Chr`9` : `108,655,096`	0.000	0.999	0.001
rs117759827 lBF = `8.85751` Chr`9` : `34,400,980`	0.001	0.999	0.000
rs58950125 lBF = `19.7195` Chr`9` : `10,382,986`	0.001	0.999	0.000
rs6479527 lBF = `-0.0506203` Chr`9` : `96,858,411`	0.001	0.999	0.000
rs4879677 lBF = `-0.0852877` Chr`9` : `27,664,432`	0.001	0.999	0.000
rs3890182 lBF = `0.0657081` Chr`9` : `107,647,655`	0.001	0.999	0.000
rs76260868 lBF = `20.5517` Chr`9` : `80,422,239`	0.001	0.999	0.000
rs73556638 lBF = `15.5477` Chr`9` : `139,034,164`	0.001	0.999	0.000
rs77048935 lBF = `15.1563` Chr`9` : `114,316,981`	0.001	0.999	0.000
rs10965243 lBF = `6.81858` Chr`9` : `22,130,065`	0.001	0.999	0.000
rs10816533 lBF = `0.0260514` Chr`9` : `99,539,138`	0.001	0.999	0.000
rs114771314 lBF = `0.0004006` Chr`9` : `12,805,030`	0.001	0.999	0.000
rs118181102 lBF = `15.8033` Chr`9` : `87,302,491`	0.001	0.999	0.000
rs10962088 lBF = `6.0293` Chr`9` : `15,591,699`	0.001	0.999	0.000
rs16906350 lBF = `1.89955` Chr`9` : `120,618,956`	0.001	0.999	0.000
rs113989315 lBF = `8.44186` Chr`9` : `7,086,245`	0.001	0.999	0.000
rs114241027 lBF = `0.00030213` Chr`9` : `12,802,823`	0.001	0.999	0.000
rs76695314 lBF = `0.00021739` Chr`9` : `30,912,925`	0.001	0.999	0.000
rs17785420 lBF = `0.00018714` Chr`9` : `30,920,638`	0.001	0.999	0.000
rs10971170 lBF = `1.70493` Chr`9` : `32,870,068`	0.001	0.999	0.000
rs7866350 lBF = `0.0266558` Chr`9` : `100,983,826`	0.000	0.999	0.001
rs148861184 lBF = `0.00012183` Chr`9` : `30,975,637`	0.001	0.999	0.000
rs4246850 lBF = `12.9549` Chr`9` : `20,928,037`	0.001	0.999	0.000
rs75056204 lBF = `8.7084` Chr`9` : `76,174,850`	0.001	0.999	0.000
rs186132788 lBF = `0.00025167` Chr`9` : `79,082,712`	0.000	0.999	0.001
rs138792676 lBF = `0.0000724` Chr`9` : `30,973,698`	0.001	0.999	0.000
rs143976741 lBF = `0.0000724` Chr`9` : `30,966,395`	0.001	0.999	0.000
rs145505122 lBF = `0.00005931` Chr`9` : `30,975,566`	0.001	0.999	0.000
rs4879913 lBF = `-0.0571` Chr`9` : `35,610,912`	0.000	0.999	0.001
rs564816 lBF = `0.00012888` Chr`9` : `4,015,370`	0.001	0.999	0.000
rs139528199 lBF = `0.00004011` Chr`9` : `30,905,405`	0.001	0.999	0.000
rs139088314 lBF = `0.00004011` Chr`9` : `30,902,950`	0.001	0.999	0.000
rs138746541 lBF = `0.00004011` Chr`9` : `30,904,471`	0.001	0.999	0.000
rs189970609 lBF = `0.00004011` Chr`9` : `30,898,161`	0.001	0.999	0.000
rs80324951 lBF = `0.00003907` Chr`9` : `30,910,159`	0.001	0.999	0.000
rs138549889 lBF = `0.00003907` Chr`9` : `30,928,039`	0.001	0.999	0.000
rs149406381 lBF = `0.00003907` Chr`9` : `30,915,159`	0.001	0.999	0.000
rs147368481 lBF = `0.00003907` Chr`9` : `30,912,421`	0.001	0.999	0.000
rs145444918 lBF = `0.00003907` Chr`9` : `30,934,829`	0.001	0.999	0.000
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rs803927 lBF = `7.65919` Chr`9` : `119,403,611`	0.000	1.000	0.000
rs16931322 lBF = `6.6231` Chr`9` : `14,078,878`	0.000	1.000	0.000
rs3025343 lBF = `5.75082` Chr`9` : `136,478,355`	0.000	1.000	0.000
rs62578126 lBF = `4.4764` Chr`9` : `129,375,338`	0.000	1.000	0.000
rs28642252 lBF = `1.31769` Chr`9` : `139,245,289`	0.000	1.000	0.000
rs13295552 lBF = `0.233886` Chr`9` : `84,522,749`	0.000	1.000	0.000
rs7849581 lBF = `0.151245` Chr`9` : `9,924,724`	0.000	1.000	0.000
rs291272 lBF = `0.0890106` Chr`9` : `10,043,014`	0.000	1.000	0.000
rs817300 lBF = `0.0661919` Chr`9` : `98,380,222`	0.000	1.000	0.000
rs17637172 lBF = `0.0235876` Chr`9` : `122,223,958`	0.000	1.000	0.000
rs6476030 lBF = `0.00137645` Chr`9` : `289,061`	0.000	1.000	0.000
rs138901640 lBF = `-0.00500691` Chr`9` : `120,793,765`	0.000	1.000	0.000
rs9695226 lBF = `-0.00986366` Chr`9` : `22,759,396`	0.000	1.000	0.000
rs1327533 lBF = `-0.0215475` Chr`9` : `113,131,163`	0.000	1.000	0.000
rs10975167 lBF = `-0.0230498` Chr`9` : `5,538,407`	0.000	1.000	0.000
rs1875620 lBF = `-0.0260819` Chr`9` : `91,540,059`	0.000	1.000	0.000
rs10982990 lBF = `-0.0404249` Chr`9` : `118,658,716`	0.000	1.000	0.000
rs1123970 lBF = `-0.0641522` Chr`9` : `2,328,213`	0.000	1.000	0.000
rs10785877 lBF = `-0.0647976` Chr`9` : `137,125,501`	0.000	1.000	0.000
rs4878639 lBF = `-0.0902041` Chr`9` : `36,099,399`	0.000	1.000	0.000
rs78755596 lBF = `34.803` Chr`9` : `136,124,590`	0.000	1.000	0.000
rs117933286 lBF = `14.503` Chr`9` : `81,306,530`	0.000	1.000	0.000
rs930522 lBF = `11.1344` Chr`9` : `11,613,940`	0.000	1.000	0.000
rs17694493 lBF = `9.13598` Chr`9` : `22,041,998`	0.000	1.000	0.000
rs7853989 lBF = `7.17616` Chr`9` : `136,131,592`	0.000	1.000	0.000
rs10760442 lBF = `5.00715` Chr`9` : `129,383,900`	0.000	1.000	0.000
rs1108581 lBF = `0.37522` Chr`9` : `136,505,241`	0.000	1.000	0.000
rs77922938 lBF = `0.314697` Chr`9` : `111,060,196`	0.000	1.000	0.000
rs7042950 lBF = `0.0188612` Chr`9` : `77,149,837`	0.000	1.000	0.000
rs7874142 lBF = `0.0135613` Chr`9` : `137,704,782`	0.000	1.000	0.000
rs112541862 lBF = `0.0130169` Chr`9` : `97,483,158`	0.000	1.000	0.000
rs148359873 lBF = `0.00976771` Chr`9` : `31,450,666`	0.000	1.000	0.000
rs7861963 lBF = `-0.0038932` Chr`9` : `128,178,907`	0.000	1.000	0.000
rs912062 lBF = `-0.0103765` Chr`9` : `841,152`	0.000	1.000	0.000
rs16938145 lBF = `-0.0162183` Chr`9` : `2,256,092`	0.000	1.000	0.000
rs3008706 lBF = `-0.0415957` Chr`9` : `16,034,538`	0.000	1.000	0.000
rs10980921 lBF = `-0.0418995` Chr`9` : `114,279,912`	0.000	1.000	0.000
rs3747547 lBF = `-0.045658` Chr`9` : `37,916,408`	0.000	1.000	0.000
rs7866070 lBF = `-0.0667158` Chr`9` : `132,444,099`	0.000	1.000	0.000
rs457287 lBF = `-0.0766499` Chr`9` : `4,834,394`	0.000	1.000	0.000
rs7043114 lBF = `-0.0800226` Chr`9` : `95,387,983`	0.000	1.000	0.000
rs9969804 lBF = `-0.081137` Chr`9` : `95,429,120`	0.000	1.000	0.000
rs76733568 lBF = `27.8026` Chr`9` : `24,659,540`	0.000	1.000	0.000
rs10965250 lBF = `27.0523` Chr`9` : `22,133,284`	0.000	1.000	0.000
rs1417290 lBF = `17.5513` Chr`9` : `7,046,917`	0.000	1.000	0.000
rs74903566 lBF = `11.9479` Chr`9` : `21,941,315`	0.000	1.000	0.000
rs76962799 lBF = `11.1339` Chr`9` : `6,187,132`	0.000	1.000	0.000
rs10975003 lBF = `8.89331` Chr`9` : `5,213,687`	0.000	1.000	0.000
rs10819009 lBF = `6.78047` Chr`9` : `98,367,811`	0.000	1.000	0.000
rs118096183 lBF = `6.77798` Chr`9` : `5,772,424`	0.000	1.000	0.000
rs739447 lBF = `6.23807` Chr`9` : `136,477,511`	0.000	1.000	0.000
rs500044 lBF = `5.94192` Chr`9` : `4,002,823`	0.000	1.000	0.000
rs8176722 lBF = `5.85039` Chr`9` : `136,132,754`	0.000	1.000	0.000
rs74521173 lBF = `5.66609` Chr`9` : `28,604,008`	0.000	1.000	0.000
rs7028529 lBF = `5.37797` Chr`9` : `79,228,042`	0.000	1.000	0.000
rs10987145 lBF = `0.564978` Chr`9` : `128,853,643`	0.000	1.000	0.000
rs13292262 lBF = `0.29922` Chr`9` : `81,915,383`	0.000	1.000	0.000
rs1535459 lBF = `0.239679` Chr`9` : `10,550,204`	0.000	1.000	0.000
rs10491833 lBF = `0.218014` Chr`9` : `24,720,232`	0.000	1.000	0.000
rs11141597 lBF = `0.16767` Chr`9` : `89,527,458`	0.000	1.000	0.000
rs1324183 lBF = `0.14879` Chr`9` : `13,557,491`	0.000	1.000	0.000
rs183433444 lBF = `0.144796` Chr`9` : `126,555,988`	0.000	1.000	0.000
rs36206051 lBF = `0.102509` Chr`9` : `90,207,626`	0.000	1.000	0.000
rs4741351 lBF = `0.0679959` Chr`9` : `14,222,782`	0.000	1.000	0.000
rs7875024 lBF = `0.0519451` Chr`9` : `16,288,424`	0.000	1.000	0.000
rs7024300 lBF = `0.04881` Chr`9` : `107,589,567`	0.000	1.000	0.000
rs10814247 lBF = `0.0487544` Chr`9` : `35,507,290`	0.000	1.000	0.000
rs2081670 lBF = `0.0479057` Chr`9` : `92,887,231`	0.000	1.000	0.000
rs118043898 lBF = `0.0258933` Chr`9` : `24,431,792`	0.000	1.000	0.000
rs2779551 lBF = `0.00679964` Chr`9` : `101,253,226`	0.000	1.000	0.000
rs10812882 lBF = `-0.00967018` Chr`9` : `28,891,817`	0.000	1.000	0.000
rs10971721 lBF = `-0.0176776` Chr`9` : `33,827,694`	0.000	1.000	0.000
rs7849973 lBF = `-0.0208065` Chr`9` : `22,819,576`	0.000	1.000	0.000
rs10965890 lBF = `-0.0240333` Chr`9` : `23,516,288`	0.000	1.000	0.000
rs9785234 lBF = `-0.0285285` Chr`9` : `98,930,250`	0.000	1.000	0.000
rs10969853 lBF = `-0.0427882` Chr`9` : `30,751,220`	0.000	1.000	0.000
rs7849782 lBF = `-0.105674` Chr`9` : `104,427,264`	0.000	1.000	0.000
rs2375981 lBF = `-0.109816` Chr`9` : `2,692,583`	0.000	1.000	0.000
rs78912274 lBF = `19.3426` Chr`9` : `11,274,294`	0.000	1.000	0.000
rs77745943 lBF = `12.1624` Chr`9` : `99,034,907`	0.000	1.000	0.000
rs3731249 lBF = `12.0614` Chr`9` : `21,970,916`	0.000	1.000	0.000
rs7018475 lBF = `11.7667` Chr`9` : `22,137,685`	0.000	1.000	0.000
rs1757945 lBF = `6.0069` Chr`9` : `81,339,569`	0.000	1.000	0.000
rs10511598 lBF = `5.70461` Chr`9` : `14,841,633`	0.000	1.000	0.000
rs113864525 lBF = `5.65687` Chr`9` : `136,473,053`	0.000	1.000	0.000
rs73628692 lBF = `4.97563` Chr`9` : `132,349,597`	0.000	1.000	0.000
rs1359742 lBF = `1.45994` Chr`9` : `22,336,996`	0.000	1.000	0.000
rs11143609 lBF = `0.140816` Chr`9` : `76,158,682`	0.000	1.000	0.000
rs79941005 lBF = `0.132319` Chr`9` : `78,502,989`	0.000	1.000	0.000
rs10988802 lBF = `0.126426` Chr`9` : `98,376,699`	0.000	1.000	0.000
rs16910061 lBF = `0.067114` Chr`9` : `97,314,741`	0.000	1.000	0.000
rs118106262 lBF = `0.0423095` Chr`9` : `8,658,954`	0.000	1.000	0.000
rs6478282 lBF = `0.0259314` Chr`9` : `119,925,095`	0.000	1.000	0.000
rs117347249 lBF = `0.0164813` Chr`9` : `81,368,654`	0.000	1.000	0.000
rs6475025 lBF = `0.00878977` Chr`9` : `16,289,428`	0.000	1.000	0.000
rs12554999 lBF = `0.00638703` Chr`9` : `82,042,491`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0173

log Bayes Factor = 654.164

contains 9 variants

0.0780

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.7160

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.7132

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.7125

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.7116

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.7057

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.7002

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.6991

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.6985

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.6763

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.6730

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.6711

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.6660

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.6598

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.6567

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.6515

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.6430

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.6375

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.6346

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.6274

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.6222

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.6190

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.6087

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.6083

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.5670

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.5506

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.5356

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.5215

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.5136

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.5135

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.4480

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.4244

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.4232

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.4217

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.4206

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.4199

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.4018

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.3785

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.3182

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.3162

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.2934

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.2818

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.2663

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.2433

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.2041

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.1545

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.1452

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.0958

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0925

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0549

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)