TreeWAS – [N94] Pain and other conditions associated with female genital organs and menstrual cycle

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs12000567 lBF = `4.07403` Chr`9` : `789,499`	0.818	0.182	0.000
rs56190763 lBF = `13.9754` Chr`9` : `91,343,917`	0.816	0.184	0.000
rs116929209 lBF = `23.964` Chr`9` : `13,692,166`	0.776	0.224	0.000
rs10114038 lBF = `1.31177` Chr`9` : `127,327,763`	0.689	0.311	0.000
rs72756269 lBF = `20.6952` Chr`9` : `119,147,710`	0.672	0.328	0.000
rs144087410 lBF = `1.81966` Chr`9` : `5,185,581`	0.670	0.330	0.000
rs62531470 lBF = `1.6886` Chr`9` : `540,319`	0.656	0.344	0.000
rs73644982 lBF = `13.9807` Chr`9` : `32,523,117`	0.636	0.364	0.000
rs117196480 lBF = `16.5445` Chr`9` : `101,301,307`	0.617	0.383	0.000
rs75622023 lBF = `16.1719` Chr`9` : `28,607,634`	0.608	0.392	0.000
rs117926975 lBF = `4.43495` Chr`9` : `97,358,141`	0.606	0.394	0.000
rs10283576 lBF = `19.8492` Chr`9` : `88,106,667`	0.582	0.418	0.000
rs78199931 lBF = `17.2832` Chr`9` : `140,865,334`	0.561	0.439	0.000
rs77322120 lBF = `13.2546` Chr`9` : `101,171,443`	0.560	0.440	0.000
rs16928280 lBF = `6.01786` Chr`9` : `8,695,233`	0.542	0.458	0.000
rs150484890 lBF = `2.77875` Chr`9` : `6,643,981`	0.539	0.461	0.000
rs118142265 lBF = `1.58801` Chr`9` : `132,194,033`	0.000	0.470	0.530
rs72746681 lBF = `16.7306` Chr`9` : `88,643,632`	0.527	0.472	0.000
rs1075654 lBF = `23.1554` Chr`9` : `136,928,276`	0.522	0.478	0.000
rs62574559 lBF = `13.3756` Chr`9` : `96,366,133`	0.517	0.483	0.000
rs75585141 lBF = `14.4069` Chr`9` : `13,387,483`	0.505	0.495	0.000
rs142944815 lBF = `2.59871` Chr`9` : `8,773,566`	0.484	0.516	0.000
rs11789912 lBF = `15.8406` Chr`9` : `130,605,739`	0.471	0.529	0.000
rs147338646 lBF = `5.39391` Chr`9` : `11,812,813`	0.466	0.534	0.000
rs138633335 lBF = `19.1105` Chr`9` : `137,459,325`	0.451	0.549	0.000
rs12336160 lBF = `0.996007` Chr`9` : `33,283,582`	0.427	0.573	0.000
rs2150702 lBF = `0.399886` Chr`9` : `5,893,861`	0.391	0.609	0.000
rs35303200 lBF = `18.3789` Chr`9` : `82,740,305`	0.345	0.655	0.000
rs60250264 lBF = `1.93414` Chr`9` : `8,897,187`	0.328	0.672	0.000
rs117260909 lBF = `0.304807` Chr`9` : `3,195,775`	0.319	0.681	0.000
rs7871607 lBF = `24.204` Chr`9` : `85,546,352`	0.312	0.688	0.000
rs117869101 lBF = `21.0144` Chr`9` : `84,429,893`	0.310	0.690	0.000
rs184522131 lBF = `1.69043` Chr`9` : `90,177,521`	0.254	0.746	0.000
rs117754409 lBF = `15.5268` Chr`9` : `13,934,924`	0.248	0.752	0.000
rs116961907 lBF = `20.2002` Chr`9` : `28,511,184`	0.245	0.755	0.000
rs75445152 lBF = `16.2649` Chr`9` : `104,310,061`	0.218	0.782	0.000
rs62571477 lBF = `27.2395` Chr`9` : `137,865,056`	0.196	0.804	0.000
rs10983320 lBF = `5.13841` Chr`9` : `119,483,689`	0.000	0.809	0.191
rs185095244 lBF = `0.251196` Chr`9` : `8,766,114`	0.188	0.812	0.000
rs4979462 lBF = `0.196688` Chr`9` : `117,567,013`	0.183	0.817	0.000
rs80001694 lBF = `12.7976` Chr`9` : `120,105,508`	0.179	0.821	0.000
rs74729480 lBF = `14.6486` Chr`9` : `137,375,254`	0.142	0.858	0.000
rs77418183 lBF = `12.5886` Chr`9` : `21,929,486`	0.123	0.877	0.000
rs77911647 lBF = `25.709` Chr`9` : `37,580,543`	0.120	0.880	0.000
rs1333005 lBF = `17.474` Chr`9` : `130,042,369`	0.102	0.898	0.000
rs78925264 lBF = `0.599859` Chr`9` : `9,015,087`	0.097	0.903	0.000
rs76605533 lBF = `18.0219` Chr`9` : `100,624,553`	0.095	0.905	0.000
rs80321149 lBF = `13.0616` Chr`9` : `16,150,000`	0.095	0.905	0.000
rs7045620 lBF = `14.6764` Chr`9` : `137,836,809`	0.088	0.912	0.000
rs7852296 lBF = `1.12641` Chr`9` : `126,352,218`	0.087	0.913	0.000
rs913351 lBF = `10.5594` Chr`9` : `130,033,547`	0.083	0.917	0.000
rs117233030 lBF = `16.6065` Chr`9` : `14,348,774`	0.081	0.919	0.000
rs117499721 lBF = `28.8784` Chr`9` : `116,579,948`	0.062	0.937	0.000
rs56281909 lBF = `11.3432` Chr`9` : `4,418,821`	0.061	0.939	0.000
rs117217495 lBF = `16.3591` Chr`9` : `24,538,142`	0.058	0.942	0.000
rs7045640 lBF = `0.303315` Chr`9` : `2,978,377`	0.056	0.943	0.000
rs186821245 lBF = `0.265221` Chr`9` : `136,606,035`	0.050	0.950	0.000
rs78284770 lBF = `17.3311` Chr`9` : `91,652,587`	0.045	0.954	0.000
rs12378793 lBF = `6.11146` Chr`9` : `79,613,935`	0.045	0.955	0.000
rs74732462 lBF = `7.95748` Chr`9` : `133,436,054`	0.044	0.956	0.000
rs72745135 lBF = `15.0573` Chr`9` : `78,973,431`	0.043	0.956	0.000
rs73387635 lBF = `15.4845` Chr`9` : `1,814,698`	0.036	0.964	0.000
rs77427150 lBF = `13.5234` Chr`9` : `101,239,130`	0.036	0.964	0.000
rs41314453 lBF = `10.1695` Chr`9` : `136,307,825`	0.028	0.972	0.000
rs1329568 lBF = `0.024609` Chr`9` : `37,037,976`	0.000	0.973	0.027
rs116995584 lBF = `15.4671` Chr`9` : `76,040,600`	0.001	0.974	0.024
rs11506819 lBF = `12.1203` Chr`9` : `108,129,480`	0.024	0.976	0.000
rs111571219 lBF = `14.5965` Chr`9` : `102,420,794`	0.023	0.977	0.000
rs1175605 lBF = `18.1644` Chr`9` : `95,233,248`	0.023	0.977	0.000
rs10813374 lBF = `0.0431441` Chr`9` : `30,879,675`	0.022	0.978	0.000
rs78608331 lBF = `12.388` Chr`9` : `13,257,251`	0.020	0.980	0.000
rs118156051 lBF = `16.9077` Chr`9` : `103,381,388`	0.019	0.981	0.000
rs117415762 lBF = `13.5576` Chr`9` : `77,698,356`	0.019	0.981	0.000
rs10993738 lBF = `0.58737` Chr`9` : `93,633,240`	0.018	0.981	0.000
rs12000457 lBF = `0.0170966` Chr`9` : `86,944,425`	0.018	0.982	0.000
rs1038195 lBF = `18.4342` Chr`9` : `137,855,660`	0.017	0.983	0.000
rs111958418 lBF = `20.8287` Chr`9` : `22,219,565`	0.016	0.984	0.000
rs17408309 lBF = `14.2638` Chr`9` : `71,632,265`	0.016	0.984	0.000
rs117932393 lBF = `0.0156868` Chr`9` : `109,152,709`	0.015	0.985	0.000
rs7865516 lBF = `23.7461` Chr`9` : `16,113,134`	0.015	0.985	0.000
rs74304768 lBF = `17.1946` Chr`9` : `79,606,878`	0.014	0.986	0.000
rs114646018 lBF = `0.00725446` Chr`9` : `18,890,061`	0.013	0.987	0.000
rs34634894 lBF = `20.2004` Chr`9` : `82,652,022`	0.012	0.988	0.000
rs113607577 lBF = `0.0172672` Chr`9` : `77,455,459`	0.011	0.988	0.000
rs7024300 lBF = `0.04881` Chr`9` : `107,589,567`	0.011	0.989	0.000
rs55760117 lBF = `18.9306` Chr`9` : `129,740,272`	0.011	0.989	0.000
rs114356520 lBF = `0.0111969` Chr`9` : `112,128,998`	0.011	0.989	0.000
rs56065549 lBF = `11.9825` Chr`9` : `95,906,364`	0.010	0.990	0.000
rs10491777 lBF = `15.847` Chr`9` : `14,352,001`	0.010	0.990	0.000
rs10961577 lBF = `0.0718727` Chr`9` : `14,562,314`	0.000	0.991	0.009
rs111873027 lBF = `0.00829232` Chr`9` : `126,953,640`	0.009	0.991	0.000
rs11144781 lBF = `0.229588` Chr`9` : `78,793,421`	0.009	0.991	0.000
rs10815355 lBF = `0.00477494` Chr`9` : `622,523`	0.008	0.991	0.000
rs77437704 lBF = `13.6847` Chr`9` : `79,623,352`	0.008	0.992	0.000
rs7032940 lBF = `-0.0818828` Chr`9` : `112,945,405`	0.000	0.992	0.008
rs72758841 lBF = `0.00678835` Chr`9` : `131,475,583`	0.007	0.992	0.000
rs79460104 lBF = `15.2248` Chr`9` : `79,610,628`	0.008	0.992	0.000
rs117593677 lBF = `14.7112` Chr`9` : `21,318,205`	0.007	0.992	0.000
rs75059066 lBF = `5.824` Chr`9` : `14,373,551`	0.007	0.993	0.000
rs118036720 lBF = `22.9077` Chr`9` : `5,408,587`	0.007	0.993	0.000
rs76718115 lBF = `14.4603` Chr`9` : `112,413,997`	0.007	0.993	0.000
rs512770 lBF = `8.25329` Chr`9` : `136,133,506`	0.007	0.993	0.000
rs117540688 lBF = `12.0488` Chr`9` : `6,064,428`	0.007	0.993	0.000
rs76909134 lBF = `18.6929` Chr`9` : `138,798,380`	0.006	0.994	0.000
rs10968749 lBF = `6.84227` Chr`9` : `28,752,484`	0.006	0.994	0.000
rs979203 lBF = `10.0324` Chr`9` : `13,730,665`	0.000	0.994	0.006
rs117362775 lBF = `13.8721` Chr`9` : `112,587,101`	0.005	0.994	0.000
rs16925263 lBF = `17.4118` Chr`9` : `7,060,997`	0.005	0.995	0.000
rs17857515 lBF = `18.2473` Chr`9` : `32,542,278`	0.005	0.995	0.000
rs78119065 lBF = `14.991` Chr`9` : `1,833,972`	0.004	0.996	0.000
rs10758732 lBF = `11.2727` Chr`9` : `5,991,772`	0.004	0.996	0.000
rs117120696 lBF = `20.1492` Chr`9` : `81,426,723`	0.004	0.996	0.000
rs41280725 lBF = `19.7128` Chr`9` : `5,469,654`	0.001	0.996	0.003
rs16924016 lBF = `0.0976692` Chr`9` : `100,511,331`	0.004	0.996	0.000
rs142965926 lBF = `0.0469266` Chr`9` : `136,618,128`	0.004	0.996	0.000
rs7024058 lBF = `17.5874` Chr`9` : `1,938,082`	0.004	0.996	0.000
rs12003072 lBF = `0.013909` Chr`9` : `86,771,161`	0.000	0.997	0.003
rs116919233 lBF = `14.0946` Chr`9` : `119,991,655`	0.003	0.997	0.000
rs7869487 lBF = `0.54459` Chr`9` : `117,580,914`	0.003	0.997	0.000
rs10965243 lBF = `6.81858` Chr`9` : `22,130,065`	0.000	0.997	0.003
rs58680346 lBF = `5.13866` Chr`9` : `7,604,965`	0.003	0.997	0.000
rs17425572 lBF = `0.62179` Chr`9` : `88,006,338`	0.000	0.997	0.003
rs140993796 lBF = `-0.00512351` Chr`9` : `111,536,356`	0.003	0.997	0.000
rs139863644 lBF = `0.00339663` Chr`9` : `5,972,759`	0.003	0.997	0.000
rs436582 lBF = `-0.024077` Chr`9` : `118,956,668`	0.003	0.997	0.000
rs117000167 lBF = `0.00350061` Chr`9` : `124,678,821`	0.003	0.997	0.000
rs74759033 lBF = `10.8675` Chr`9` : `127,676,918`	0.003	0.997	0.000
rs117571560 lBF = `14.6503` Chr`9` : `76,169,871`	0.001	0.997	0.002
rs7864133 lBF = `0.00190717` Chr`9` : `84,053,686`	0.002	0.997	0.000
rs75125430 lBF = `16.6037` Chr`9` : `24,472,623`	0.001	0.998	0.001
rs76780579 lBF = `0.00258463` Chr`9` : `16,414,506`	0.002	0.998	0.000
rs111600634 lBF = `1.82236` Chr`9` : `120,618,625`	0.002	0.998	0.000
rs3731217 lBF = `0.0725148` Chr`9` : `21,984,661`	0.000	0.998	0.002
rs74308953 lBF = `0.00117694` Chr`9` : `121,431,189`	0.001	0.998	0.000
rs17244432 lBF = `15.3075` Chr`9` : `139,801,662`	0.001	0.998	0.001
rs377310910 lBF = `0.0488873` Chr`9` : `1,940,937`	0.002	0.998	0.000
rs55721418 lBF = `20.0497` Chr`9` : `133,913,740`	0.002	0.998	0.000
rs7021404 lBF = `0.00087256` Chr`9` : `25,414,051`	0.001	0.998	0.000
rs12342947 lBF = `20.0509` Chr`9` : `7,026,860`	0.002	0.998	0.000
rs75087119 lBF = `17.2273` Chr`9` : `7,426,671`	0.002	0.998	0.000
rs3904778 lBF = `-0.0629115` Chr`9` : `16,681,993`	0.002	0.998	0.000
rs6478108 lBF = `2.18757` Chr`9` : `117,558,703`	0.002	0.998	0.000
rs182700414 lBF = `0.00117781` Chr`9` : `121,971,770`	0.001	0.998	0.000
rs8176720 lBF = `0.244702` Chr`9` : `136,132,873`	0.002	0.998	0.000
rs117488235 lBF = `19.2182` Chr`9` : `15,707,430`	0.000	0.998	0.001
rs145699582 lBF = `0.00035679` Chr`9` : `5,169,600`	0.001	0.998	0.000
rs12346945 lBF = `0.0003603` Chr`9` : `98,844,059`	0.001	0.998	0.000
rs76495380 lBF = `0.0004597` Chr`9` : `20,844,431`	0.001	0.999	0.000
rs187979858 lBF = `0.0135995` Chr`9` : `136,600,098`	0.001	0.999	0.000
rs10993160 lBF = `-0.0135773` Chr`9` : `97,068,926`	0.001	0.999	0.000
rs17461620 lBF = `0.49764` Chr`9` : `88,963,008`	0.000	0.999	0.001
rs78617806 lBF = `13.7235` Chr`9` : `109,377,753`	0.001	0.999	0.000
rs4977754 lBF = `7.24733` Chr`9` : `22,062,012`	0.001	0.999	0.000
rs3780181 lBF = `3.15919` Chr`9` : `2,640,759`	0.001	0.999	0.000
rs16906350 lBF = `1.89955` Chr`9` : `120,618,956`	0.001	0.999	0.000
rs77528658 lBF = `12.135` Chr`9` : `104,204,920`	0.001	0.999	0.000
rs75004325 lBF = `14.3185` Chr`9` : `73,586,372`	0.001	0.999	0.001
rs3810936 lBF = `0.923276` Chr`9` : `117,552,885`	0.001	0.999	0.000
rs114771314 lBF = `0.0004006` Chr`9` : `12,805,030`	0.001	0.999	0.000
rs7045881 lBF = `-0.026197` Chr`9` : `26,935,996`	0.001	0.999	0.000
rs581080 lBF = `8.38946` Chr`9` : `15,305,378`	0.001	0.999	0.000
rs77005723 lBF = `23.0241` Chr`9` : `131,211,201`	0.001	0.999	0.000
rs114241027 lBF = `0.00030213` Chr`9` : `12,802,823`	0.001	0.999	0.000
rs76695314 lBF = `0.00021739` Chr`9` : `30,912,925`	0.001	0.999	0.000
rs17785420 lBF = `0.00018714` Chr`9` : `30,920,638`	0.001	0.999	0.000
rs10971170 lBF = `1.70493` Chr`9` : `32,870,068`	0.001	0.999	0.000
rs10973964 lBF = `14.244` Chr`9` : `38,669,362`	0.001	0.999	0.001
rs79299247 lBF = `13.7264` Chr`9` : `82,970,155`	0.001	0.999	0.000
rs148861184 lBF = `0.00012183` Chr`9` : `30,975,637`	0.001	0.999	0.000
rs76153552 lBF = `18.1323` Chr`9` : `95,913,866`	0.001	0.999	0.000
rs118181102 lBF = `15.8033` Chr`9` : `87,302,491`	0.001	0.999	0.000
rs186132788 lBF = `0.00025167` Chr`9` : `79,082,712`	0.000	0.999	0.001
rs143976741 lBF = `0.0000724` Chr`9` : `30,966,395`	0.001	0.999	0.000
rs138792676 lBF = `0.0000724` Chr`9` : `30,973,698`	0.001	0.999	0.000
rs145505122 lBF = `0.00005931` Chr`9` : `30,975,566`	0.001	0.999	0.000
rs564816 lBF = `0.00012888` Chr`9` : `4,015,370`	0.001	0.999	0.000
rs138746541 lBF = `0.00004011` Chr`9` : `30,904,471`	0.001	0.999	0.000
rs189970609 lBF = `0.00004011` Chr`9` : `30,898,161`	0.001	0.999	0.000
rs139528199 lBF = `0.00004011` Chr`9` : `30,905,405`	0.001	0.999	0.000
rs139088314 lBF = `0.00004011` Chr`9` : `30,902,950`	0.001	0.999	0.000
rs17785414 lBF = `0.00003907` Chr`9` : `30,916,630`	0.001	0.999	0.000
rs80324951 lBF = `0.00003907` Chr`9` : `30,910,159`	0.001	0.999	0.000
rs138549889 lBF = `0.00003907` Chr`9` : `30,928,039`	0.001	0.999	0.000
rs149406381 lBF = `0.00003907` Chr`9` : `30,915,159`	0.001	0.999	0.000
rs147368481 lBF = `0.00003907` Chr`9` : `30,912,421`	0.001	0.999	0.000
rs145444918 lBF = `0.00003907` Chr`9` : `30,934,829`	0.001	0.999	0.000
rs149450639 lBF = `0.00003907` Chr`9` : `30,907,835`	0.001	0.999	0.000
rs151101851 lBF = `0.0000136` Chr`9` : `30,955,024`	0.001	0.999	0.000
rs184557780 lBF = `0.0000136` Chr`9` : `30,953,076`	0.001	0.999	0.000
rs141510725 lBF = `0.0000136` Chr`9` : `30,973,107`	0.001	0.999	0.000
rs74838144 lBF = `0.0000136` Chr`9` : `30,971,369`	0.001	0.999	0.000
rs151321188 lBF = `0.0000136` Chr`9` : `30,957,905`	0.001	0.999	0.000
rs75214736 lBF = `0.0000136` Chr`9` : `30,953,851`	0.001	0.999	0.000
rs184676284 lBF = `0.0000136` Chr`9` : `30,972,355`	0.001	0.999	0.000
rs12000445 lBF = `0.912959` Chr`9` : `23,426,271`	0.000	0.999	0.001
rs61732491 lBF = `0.00003` Chr`9` : `131,186,783`	0.001	0.999	0.000
rs73556638 lBF = `15.5477` Chr`9` : `139,034,164`	0.001	0.999	0.000
rs10125337 lBF = `0.00010193` Chr`9` : `97,444,038`	0.001	0.999	0.000
rs7042315 lBF = `-0.00003732` Chr`9` : `99,029,289`	0.001	0.999	0.000
rs117520190 lBF = `16.2172` Chr`9` : `98,903,902`	0.001	0.999	0.000
rs12338076 lBF = `0.00017178` Chr`9` : `139,121,740`	0.001	0.999	0.001
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rs10123671 lBF = `-0.085821` Chr`9` : `29,161,218`	0.000	1.000	0.000
rs2807580 lBF = `-0.102958` Chr`9` : `126,926,107`	0.000	1.000	0.000
rs3731239 lBF = `69.4018` Chr`9` : `21,974,218`	0.000	1.000	0.000
rs10975479 lBF = `35.199` Chr`9` : `6,197,377`	0.000	1.000	0.000
rs78757963 lBF = `12.3274` Chr`9` : `6,282,511`	0.000	1.000	0.000
rs7021724 lBF = `11.9942` Chr`9` : `2,527,900`	0.000	1.000	0.000
rs72755182 lBF = `11.8699` Chr`9` : `126,214,819`	0.000	1.000	0.000
rs7038114 lBF = `8.37975` Chr`9` : `79,382,773`	0.000	1.000	0.000
rs12003180 lBF = `2.87978` Chr`9` : `15,283,097`	0.000	1.000	0.000
rs2506125 lBF = `2.46509` Chr`9` : `84,293,453`	0.000	1.000	0.000
rs150066336 lBF = `2.1353` Chr`9` : `13,475,446`	0.000	1.000	0.000
rs1535459 lBF = `0.239679` Chr`9` : `10,550,204`	0.000	1.000	0.000
rs79941005 lBF = `0.132319` Chr`9` : `78,502,989`	0.000	1.000	0.000
rs72658409 lBF = `0.114847` Chr`9` : `22,160,087`	0.000	1.000	0.000
rs12380424 lBF = `0.099035` Chr`9` : `131,403,221`	0.000	1.000	0.000
rs291272 lBF = `0.0890106` Chr`9` : `10,043,014`	0.000	1.000	0.000
rs148359873 lBF = `0.00976771` Chr`9` : `31,450,666`	0.000	1.000	0.000
rs10969106 lBF = `0.00960723` Chr`9` : `29,364,327`	0.000	1.000	0.000
rs10962181 lBF = `0.00482127` Chr`9` : `1,595,160`	0.000	1.000	0.000
rs10818854 lBF = `0.00070567` Chr`9` : `126,446,778`	0.000	1.000	0.000
rs10975870 lBF = `-0.0586945` Chr`9` : `6,880,263`	0.000	1.000	0.000
rs1147813 lBF = `-0.0661128` Chr`9` : `25,859,709`	0.000	1.000	0.000
rs635634 lBF = `144.118` Chr`9` : `136,155,000`	0.000	1.000	0.000
rs686030 lBF = `17.631` Chr`9` : `15,304,782`	0.000	1.000	0.000
rs78296588 lBF = `15.8425` Chr`9` : `102,305,131`	0.000	1.000	0.000
Affx-33347130 lBF = `13.4651` Chr`9` : `136,135,238`	0.000	1.000	0.000
rs7863943 lBF = `13.4081` Chr`9` : `100,306,204`	0.000	1.000	0.000
rs34390775 lBF = `10.8706` Chr`9` : `140,702,339`	0.000	1.000	0.000
rs17485667 lBF = `7.24574` Chr`9` : `131,768,191`	0.000	1.000	0.000
rs1535454 lBF = `0.810124` Chr`9` : `5,410,723`	0.000	1.000	0.000
rs4838320 lBF = `0.163612` Chr`9` : `128,831,097`	0.000	1.000	0.000
rs649057 lBF = `0.130024` Chr`9` : `102,234,323`	0.000	1.000	0.000
rs914715 lBF = `0.108219` Chr`9` : `82,310,898`	0.000	1.000	0.000
rs7863100 lBF = `0.0990594` Chr`9` : `18,640,590`	0.000	1.000	0.000
rs2210430 lBF = `0.0966713` Chr`9` : `25,501,297`	0.000	1.000	0.000
rs2210327 lBF = `0.00985079` Chr`9` : `18,109,235`	0.000	1.000	0.000
rs4576506 lBF = `-0.0228237` Chr`9` : `31,546,472`	0.000	1.000	0.000
rs7870657 lBF = `-0.0272598` Chr`9` : `71,724,126`	0.000	1.000	0.000
rs3747547 lBF = `-0.045658` Chr`9` : `37,916,408`	0.000	1.000	0.000
rs11793049 lBF = `-0.0808728` Chr`9` : `116,773,869`	0.000	1.000	0.000
rs1331623 lBF = `-0.113332` Chr`9` : `122,199,203`	0.000	1.000	0.000
rs1417290 lBF = `17.5513` Chr`9` : `7,046,917`	0.000	1.000	0.000
rs8176741 lBF = `13.4069` Chr`9` : `136,131,461`	0.000	1.000	0.000
rs3731249 lBF = `12.0614` Chr`9` : `21,970,916`	0.000	1.000	0.000
rs117134689 lBF = `7.85157` Chr`9` : `5,936,490`	0.000	1.000	0.000
rs16919333 lBF = `7.20476` Chr`9` : `103,452,327`	0.000	1.000	0.000
rs8190560 lBF = `0.444887` Chr`9` : `99,002,185`	0.000	1.000	0.000
rs13292262 lBF = `0.29922` Chr`9` : `81,915,383`	0.000	1.000	0.000
rs13295552 lBF = `0.233886` Chr`9` : `84,522,749`	0.000	1.000	0.000
rs12379034 lBF = `0.109707` Chr`9` : `123,162,666`	0.000	1.000	0.000
rs8190569 lBF = `0.0301256` Chr`9` : `98,998,061`	0.000	1.000	0.000
rs13287547 lBF = `0.0258107` Chr`9` : `16,286,890`	0.000	1.000	0.000
rs3802457 lBF = `0.0160534` Chr`9` : `97,741,336`	0.000	1.000	0.000
rs11144688 lBF = `0.00352942` Chr`9` : `78,542,286`	0.000	1.000	0.000
rs72724928 lBF = `-0.00324103` Chr`9` : `28,024,194`	0.000	1.000	0.000
rs13284938 lBF = `-0.0169362` Chr`9` : `1,076,640`	0.000	1.000	0.000
rs7853970 lBF = `-0.0287689` Chr`9` : `86,715,566`	0.000	1.000	0.000
rs10758161 lBF = `-0.0411922` Chr`9` : `32,755,028`	0.000	1.000	0.000
rs7035284 lBF = `-0.0671117` Chr`9` : `21,678,973`	0.000	1.000	0.000
rs8177812 lBF = `-0.072232` Chr`9` : `116,151,527`	0.000	1.000	0.000
rs77745943 lBF = `12.1624` Chr`9` : `99,034,907`	0.000	1.000	0.000
rs75056204 lBF = `8.7084` Chr`9` : `76,174,850`	0.000	1.000	0.000
rs1536895 lBF = `0.41227` Chr`9` : `106,793,726`	0.000	1.000	0.000
rs11138290 lBF = `0.243198` Chr`9` : `82,163,313`	0.000	1.000	0.000
rs10120372 lBF = `0.237676` Chr`9` : `108,440,542`	0.000	1.000	0.000
rs1360517 lBF = `0.0789714` Chr`9` : `13,007,129`	0.000	1.000	0.000
rs113290458 lBF = `0.0418686` Chr`9` : `128,456,000`	0.000	1.000	0.000
rs3758354 lBF = `0.035668` Chr`9` : `75,764,565`	0.000	1.000	0.000
rs1929412 lBF = `0.0143466` Chr`9` : `11,951,222`	0.000	1.000	0.000
rs11790994 lBF = `0.00850557` Chr`9` : `98,429,266`	0.000	1.000	0.000
rs10809650 lBF = `-0.00109626` Chr`9` : `1,202,371`	0.000	1.000	0.000
rs3736986 lBF = `-0.0063385` Chr`9` : `36,194,569`	0.000	1.000	0.000
rs2146180 lBF = `-0.00976102` Chr`9` : `8,045,606`	0.000	1.000	0.000
rs912062 lBF = `-0.0103765` Chr`9` : `841,152`	0.000	1.000	0.000
rs10958998 lBF = `-0.0155727` Chr`9` : `10,275,798`	0.000	1.000	0.000
rs10968562 lBF = `-0.0474651` Chr`9` : `28,402,043`	0.000	1.000	0.000
rs1806864 lBF = `-0.0599879` Chr`9` : `90,031,669`	0.000	1.000	0.000
rs7043114 lBF = `-0.0800226` Chr`9` : `95,387,983`	0.000	1.000	0.000
rs9969804 lBF = `-0.081137` Chr`9` : `95,429,120`	0.000	1.000	0.000
rs1342899 lBF = `-0.0953982` Chr`9` : `105,735,195`	0.000	1.000	0.000
rs78755596 lBF = `34.803` Chr`9` : `136,124,590`	0.000	1.000	0.000
rs79791727 lBF = `11.6893` Chr`9` : `36,801,459`	0.000	1.000	0.000
rs1887428 lBF = `11.0147` Chr`9` : `4,984,530`	0.000	1.000	0.000
rs16925298 lBF = `10.4186` Chr`9` : `7,081,674`	0.000	1.000	0.000
rs1968498 lBF = `9.0386` Chr`9` : `86,696,174`	0.000	1.000	0.000
rs803927 lBF = `7.65919` Chr`9` : `119,403,611`	0.000	1.000	0.000
rs2501559 lBF = `6.41319` Chr`9` : `140,565,196`	0.000	1.000	0.000
rs72752974 lBF = `6.14767` Chr`9` : `92,516,854`	0.000	1.000	0.000
rs2297603 lBF = `6.02943` Chr`9` : `101,778,265`	0.000	1.000	0.000
rs1337391 lBF = `1.3091` Chr`9` : `16,611,692`	0.000	1.000	0.000
rs60589809 lBF = `0.550744` Chr`9` : `92,937,726`	0.000	1.000	0.000
rs12342373 lBF = `0.0855483` Chr`9` : `129,402,567`	0.000	1.000	0.000
rs7037266 lBF = `0.0637594` Chr`9` : `6,942,940`	0.000	1.000	0.000
rs16924631 lBF = `0.00615846` Chr`9` : `6,486,308`	0.000	1.000	0.000
rs6476030 lBF = `0.00137645` Chr`9` : `289,061`	0.000	1.000	0.000
rs12350534 lBF = `-0.0110918` Chr`9` : `89,558,064`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9999

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.9997

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.9996

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.9957

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9931

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.9921

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.9846

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.9506

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.9500

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9468

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.9447

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.9442

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.9440

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.9339

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.9248

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.9225

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.9071

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.9005

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.9000

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.8826

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.8370

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.8310

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.8218

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.7915

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.7811

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.7753

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.7212

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.7206

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.6511

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.6005

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.6002

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.5712

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.4881

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.4375

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.4119

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.3769

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.3318

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.3258

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2914

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2404

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.1433

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.1302

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.1053

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.0970

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.0887

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0762

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.0623

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.0613

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0594

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0520

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	N80-N98 Noninflammatory disorders of female genital tract
Nested terms	N94.0 Mittelschmerz N94.1 Dyspareunia N94.2 Vaginismus N94.3 Premenstrual tension syndrome N94.4 Primary dysmenorrhoea N94.5 Secondary dysmenorrhoea N94.6 Dysmenorrhoea, unspecified N94.8 Other specified conditions associated with female genital organs and menstrual cycle N94.9 Unspecified condition associated with female genital organs and menstrual cycle

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)