TreeWAS – [N94] Pain and other conditions associated with female genital organs and menstrual cycle

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs8036080 lBF = `3.38637` Chr`15` : `41,196,384`	0.915	0.085	0.000
rs17647114 lBF = `1.90052` Chr`15` : `87,436,745`	0.819	0.181	0.000
rs77457385 lBF = `15.4395` Chr`15` : `69,979,587`	0.815	0.185	0.000
rs117206795 lBF = `31.2014` Chr`15` : `67,270,650`	0.807	0.193	0.000
rs339978 lBF = `5.5937` Chr`15` : `60,937,402`	0.784	0.216	0.000
rs78425542 lBF = `16.392` Chr`15` : `69,399,885`	0.725	0.275	0.000
rs2233070 lBF = `23.8275` Chr`15` : `23,889,739`	0.671	0.329	0.000
rs62012778 lBF = `9.84005` Chr`15` : `63,873,443`	0.623	0.377	0.000
rs138117236 lBF = `16.8457` Chr`15` : `83,309,422`	0.618	0.382	0.000
rs11634027 lBF = `15.0934` Chr`15` : `26,637,415`	0.612	0.388	0.000
rs34069323 lBF = `7.33643` Chr`15` : `85,187,245`	0.587	0.413	0.000
rs192229215 lBF = `1.12807` Chr`15` : `48,048,566`	0.567	0.433	0.000
rs75334015 lBF = `17.4139` Chr`15` : `40,551,636`	0.489	0.511	0.000
rs1426654 lBF = `0.663903` Chr`15` : `48,426,484`	0.480	0.520	0.000
rs56190744 lBF = `18.1608` Chr`15` : `78,170,282`	0.411	0.588	0.000
rs75660786 lBF = `15.6938` Chr`15` : `96,161,741`	0.408	0.592	0.000
rs117040525 lBF = `29.602` Chr`15` : `36,563,570`	0.381	0.619	0.000
rs117207033 lBF = `17.1989` Chr`15` : `97,116,274`	0.381	0.619	0.000
rs1834640 lBF = `8.70364` Chr`15` : `48,392,165`	0.354	0.646	0.000
rs75905933 lBF = `1.53062` Chr`15` : `31,548,996`	0.240	0.759	0.000
rs78820411 lBF = `24.1897` Chr`15` : `26,478,903`	0.190	0.810	0.000
rs8035094 lBF = `0.0707688` Chr`15` : `33,564,482`	0.000	0.823	0.177
rs6576557 lBF = `17.711` Chr`15` : `26,540,811`	0.147	0.853	0.000
rs183775327 lBF = `14.3545` Chr`15` : `67,274,514`	0.146	0.854	0.000
rs16966389 lBF = `0.121312` Chr`15` : `38,464,874`	0.145	0.855	0.000
rs114897391 lBF = `14.311` Chr`15` : `96,065,019`	0.119	0.880	0.000
rs12593811 lBF = `5.9761` Chr`15` : `101,721,892`	0.118	0.882	0.000
rs112232665 lBF = `16.6494` Chr`15` : `85,869,137`	0.103	0.897	0.000
rs149916999 lBF = `5.74278` Chr`15` : `31,408,269`	0.099	0.900	0.001
rs144442299 lBF = `5.60539` Chr`15` : `54,295,192`	0.084	0.915	0.000
rs74850597 lBF = `17.1584` Chr`15` : `98,129,804`	0.077	0.923	0.000
rs116299775 lBF = `29.8285` Chr`15` : `91,445,276`	0.070	0.930	0.000
rs17819300 lBF = `0.0898622` Chr`15` : `56,210,929`	0.070	0.930	0.000
rs141308780 lBF = `0.577437` Chr`15` : `84,260,542`	0.069	0.930	0.000
rs74752048 lBF = `15.608` Chr`15` : `50,060,632`	0.064	0.936	0.000
rs116448368 lBF = `23.9738` Chr`15` : `52,600,590`	0.063	0.937	0.000
rs1847246 lBF = `13.224` Chr`15` : `82,323,786`	0.060	0.940	0.000
rs62002515 lBF = `10.786` Chr`15` : `59,296,838`	0.055	0.945	0.000
rs17522649 lBF = `26.3622` Chr`15` : `93,084,746`	0.052	0.948	0.000
rs72763071 lBF = `14.1776` Chr`15` : `101,347,950`	0.051	0.949	0.000
rs75668017 lBF = `16.6332` Chr`15` : `94,960,358`	0.046	0.954	0.000
rs2433610 lBF = `0.0435733` Chr`15` : `45,686,091`	0.040	0.960	0.000
rs539901 lBF = `0.0507584` Chr`15` : `58,674,669`	0.033	0.967	0.000
rs113652541 lBF = `18.6299` Chr`15` : `53,573,692`	0.033	0.967	0.000
rs4575512 lBF = `12.8191` Chr`15` : `97,941,122`	0.027	0.973	0.000
rs79774432 lBF = `14.4188` Chr`15` : `38,172,034`	0.025	0.975	0.000
rs147577476 lBF = `13.9193` Chr`15` : `60,432,921`	0.025	0.975	0.000
rs117133403 lBF = `17.8134` Chr`15` : `49,823,391`	0.024	0.976	0.000
rs117932080 lBF = `25.9049` Chr`15` : `93,875,227`	0.024	0.976	0.000
rs785427 lBF = `9.18741` Chr`15` : `30,182,766`	0.022	0.978	0.000
rs691655 lBF = `19.4694` Chr`15` : `50,020,318`	0.022	0.978	0.000
rs1916149 lBF = `16.6286` Chr`15` : `38,464,431`	0.015	0.984	0.000
rs148060237 lBF = `12.4871` Chr`15` : `72,180,440`	0.014	0.986	0.000
rs8033755 lBF = `6.27132` Chr`15` : `28,381,546`	0.013	0.987	0.000
rs28602670 lBF = `0.0139218` Chr`15` : `78,768,167`	0.012	0.987	0.000
rs2174866 lBF = `0.0143718` Chr`15` : `53,464,220`	0.012	0.987	0.000
rs72727381 lBF = `15.1333` Chr`15` : `38,823,527`	0.001	0.988	0.011
rs75034815 lBF = `18.297` Chr`15` : `31,315,963`	0.012	0.988	0.000
rs11072158 lBF = `-0.0701589` Chr`15` : `70,634,709`	0.012	0.988	0.000
rs16957709 lBF = `0.00753887` Chr`15` : `43,702,948`	0.000	0.989	0.011
rs79434560 lBF = `18.5118` Chr`15` : `67,049,150`	0.010	0.990	0.000
rs2222656 lBF = `0.00626451` Chr`15` : `52,773,023`	0.009	0.991	0.000
rs76954458 lBF = `13.8611` Chr`15` : `35,189,409`	0.009	0.991	0.000
rs74850413 lBF = `11.8512` Chr`15` : `98,258,859`	0.007	0.993	0.000
rs1878186 lBF = `0.0132574` Chr`15` : `48,508,400`	0.000	0.993	0.006
rs7179456 lBF = `-0.0798496` Chr`15` : `59,174,539`	0.007	0.993	0.000
rs2636061 lBF = `0.00507292` Chr`15` : `29,424,755`	0.006	0.994	0.000
rs117803799 lBF = `13.8032` Chr`15` : `59,431,200`	0.006	0.994	0.000
rs4432245 lBF = `0.0990814` Chr`15` : `40,324,481`	0.006	0.994	0.000
rs7179400 lBF = `8.3148` Chr`15` : `94,739,583`	0.006	0.994	0.000
rs487836 lBF = `0.00557908` Chr`15` : `58,033,859`	0.005	0.994	0.000
rs117654141 lBF = `19.1486` Chr`15` : `38,120,376`	0.005	0.995	0.000
rs3924426 lBF = `0.00594985` Chr`15` : `92,445,873`	0.005	0.995	0.000
rs16953998 lBF = `15.2931` Chr`15` : `70,264,186`	0.005	0.995	0.000
rs10152591 lBF = `0.753858` Chr`15` : `70,048,157`	0.005	0.995	0.000
rs566767 lBF = `0.00288706` Chr`15` : `58,082,367`	0.000	0.996	0.004
rs10520638 lBF = `2.90698` Chr`15` : `87,253,534`	0.004	0.996	0.000
rs6493206 lBF = `0.00251152` Chr`15` : `46,569,466`	0.004	0.996	0.000
rs117231330 lBF = `14.3463` Chr`15` : `81,214,019`	0.003	0.997	0.000
Affx-52173688 lBF = `17.4903` Chr`15` : `99,671,741`	0.003	0.997	0.000
rs10162694 lBF = `0.00227465` Chr`15` : `35,346,541`	0.003	0.997	0.000
rs117508732 lBF = `10.2984` Chr`15` : `67,824,170`	0.003	0.997	0.000
rs4076457 lBF = `-0.0184089` Chr`15` : `78,007,213`	0.003	0.997	0.000
rs12901682 lBF = `2.81371` Chr`15` : `78,833,223`	0.002	0.997	0.000
rs7182209 lBF = `0.00272839` Chr`15` : `46,132,501`	0.002	0.998	0.000
rs78275630 lBF = `11.943` Chr`15` : `58,202,985`	0.002	0.998	0.000
rs72655652 lBF = `20.5631` Chr`15` : `92,647,684`	0.002	0.998	0.000
rs28377390 lBF = `-0.0104245` Chr`15` : `97,740,738`	0.002	0.998	0.000
rs35216196 lBF = `26.0859` Chr`15` : `38,193,234`	0.002	0.998	0.000
rs10851371 lBF = `35.9133` Chr`15` : `39,224,945`	0.000	0.998	0.002
rs118036322 lBF = `17.3823` Chr`15` : `54,331,986`	0.002	0.998	0.000
rs335810 lBF = `0.00440869` Chr`15` : `60,368,206`	0.000	0.998	0.002
rs28414670 lBF = `16.6255` Chr`15` : `96,000,620`	0.002	0.998	0.000
rs75598935 lBF = `0.220014` Chr`15` : `80,219,593`	0.002	0.998	0.000
rs79336250 lBF = `15.5463` Chr`15` : `57,308,475`	0.000	0.998	0.002
rs2472297 lBF = `2.21063` Chr`15` : `75,027,880`	0.000	0.998	0.002
rs12909281 lBF = `12.1942` Chr`15` : `33,345,389`	0.002	0.998	0.000
rs76280009 lBF = `6.73436` Chr`15` : `30,228,071`	0.002	0.998	0.000
rs1445021 lBF = `0.00043097` Chr`15` : `68,735,586`	0.001	0.998	0.000
rs1437588 lBF = `-0.0796046` Chr`15` : `96,809,782`	0.002	0.998	0.000
rs55742391 lBF = `8.79257` Chr`15` : `66,061,627`	0.002	0.998	0.000
rs3934516 lBF = `7.69858` Chr`15` : `61,603,979`	0.000	0.998	0.001
rs12900968 lBF = `10.5004` Chr`15` : `58,108,764`	0.001	0.999	0.000
rs6576507 lBF = `0.00076318` Chr`15` : `26,288,394`	0.001	0.999	0.000
rs2052702 lBF = `0.00061283` Chr`15` : `69,989,505`	0.001	0.999	0.000
rs4606657 lBF = `14.3358` Chr`15` : `61,601,952`	0.000	0.999	0.001
rs1513859 lBF = `0.00002134` Chr`15` : `97,750,335`	0.001	0.999	0.000
rs10518960 lBF = `17.1635` Chr`15` : `45,334,829`	0.001	0.999	0.000
rs28392903 lBF = `14.0654` Chr`15` : `26,106,644`	0.001	0.999	0.000
rs1442808 lBF = `0.0006366` Chr`15` : `98,764,847`	0.000	0.999	0.001
rs4965593 lBF = `-0.0671532` Chr`15` : `100,758,385`	0.000	0.999	0.001
rs17228178 lBF = `-0.105391` Chr`15` : `31,469,928`	0.000	0.999	0.001
rs12905014 lBF = `3.80001` Chr`15` : `92,883,840`	0.001	0.999	0.000
rs16976033 lBF = `0.0002612` Chr`15` : `55,456,510`	0.001	0.999	0.000
rs148024591 lBF = `0.00024579` Chr`15` : `93,914,451`	0.001	0.999	0.000
rs117267308 lBF = `0.118699` Chr`15` : `63,346,376`	0.001	0.999	0.000
rs80332023 lBF = `0.00037071` Chr`15` : `101,073,444`	0.000	0.999	0.001
rs17819946 lBF = `15.2912` Chr`15` : `57,428,671`	0.001	0.999	0.001
rs281229 lBF = `0.0001434` Chr`15` : `47,718,455`	0.001	0.999	0.000
rs12440825 lBF = `0.00015619` Chr`15` : `85,223,403`	0.001	0.999	0.000
rs7164035 lBF = `0.00010418` Chr`15` : `58,102,241`	0.001	0.999	0.000
rs8025093 lBF = `0.00007081` Chr`15` : `25,602,950`	0.001	0.999	0.000
rs891288 lBF = `0.00004609` Chr`15` : `85,377,015`	0.001	0.999	0.000
rs75393192 lBF = `0.00004102` Chr`15` : `75,870,551`	0.001	0.999	0.000
rs190065944 lBF = `0.0000287` Chr`15` : `78,859,610`	0.001	0.999	0.000
rs57017013 lBF = `0.00000415` Chr`15` : `63,891,961`	0.001	0.999	0.000
rs142859932 lBF = `0` Chr`15` : `73,730,683`	0.001	0.999	0.001
rs140011970 lBF = `0` Chr`15` : `92,650,280`	0.001	0.999	0.001
rs4775602 lBF = `0` Chr`15` : `46,856,928`	0.001	0.999	0.001
rs2414208 lBF = `0` Chr`15` : `53,203,301`	0.001	0.999	0.001
rs75646498 lBF = `0` Chr`15` : `29,876,649`	0.001	0.999	0.001
rs140526800 lBF = `0` Chr`15` : `58,089,335`	0.001	0.999	0.001
rs114831632 lBF = `0` Chr`15` : `58,085,372`	0.001	0.999	0.001
rs79238367 lBF = `0` Chr`15` : `37,347,665`	0.001	0.999	0.001
rs8028579 lBF = `0` Chr`15` : `48,005,470`	0.001	0.999	0.001
rs191299947 lBF = `0` Chr`15` : `80,877,557`	0.001	0.999	0.001
rs113870173 lBF = `0` Chr`15` : `58,104,799`	0.001	0.999	0.001
rs8038108 lBF = `0` Chr`15` : `90,089,276`	0.001	0.999	0.001
rs16958536 lBF = `0` Chr`15` : `47,029,906`	0.001	0.999	0.001
rs145330511 lBF = `0` Chr`15` : `58,100,592`	0.001	0.999	0.001
rs147415896 lBF = `0` Chr`15` : `92,626,515`	0.001	0.999	0.001
rs60283548 lBF = `0` Chr`15` : `97,454,880`	0.001	0.999	0.001
rs4775302 lBF = `0` Chr`15` : `46,639,808`	0.001	0.999	0.001
rs16961557 lBF = `0` Chr`15` : `49,048,128`	0.001	0.999	0.001
rs149074315 lBF = `0` Chr`15` : `58,088,889`	0.001	0.999	0.001
rs144587541 lBF = `0` Chr`15` : `80,919,708`	0.001	0.999	0.001
rs1378214 lBF = `0` Chr`15` : `47,579,004`	0.001	0.999	0.001
rs75312808 lBF = `17.1131` Chr`15` : `47,918,724`	0.000	0.999	0.001
rs142936968 lBF = `0.00001197` Chr`15` : `28,224,931`	0.001	0.999	0.000
rs115942227 lBF = `-0.00000509` Chr`15` : `58,105,033`	0.000	0.999	0.001
rs180709182 lBF = `-0.00002313` Chr`15` : `47,998,630`	0.000	0.999	0.001
rs3751599 lBF = `-0.00002368` Chr`15` : `51,573,533`	0.001	0.999	0.000
rs150978828 lBF = `-0.00002407` Chr`15` : `37,500,185`	0.001	0.999	0.000
rs16939881 lBF = `-0.00014956` Chr`15` : `58,471,979`	0.001	0.999	0.000
rs79252495 lBF = `0.0204928` Chr`15` : `26,722,016`	0.001	0.999	0.000
rs8030672 lBF = `-0.00102804` Chr`15` : `69,059,084`	0.001	0.999	0.000
rs2965313 lBF = `14.0878` Chr`15` : `48,241,505`	0.001	0.999	0.000
rs12900158 lBF = `1.30405` Chr`15` : `47,879,627`	0.001	0.999	0.000
rs78236847 lBF = `19.6533` Chr`15` : `33,294,717`	0.000	0.999	0.001
rs2965324 lBF = `13.1575` Chr`15` : `48,274,460`	0.001	0.999	0.000
rs4906759 lBF = `0.00225267` Chr`15` : `25,975,208`	0.001	0.999	0.000
rs7495694 lBF = `-0.00040933` Chr`15` : `73,125,992`	0.001	0.999	0.000
rs7179575 lBF = `-0.0527773` Chr`15` : `27,323,199`	0.001	0.999	0.000
rs4886755 lBF = `-0.067757` Chr`15` : `76,298,132`	0.001	0.999	0.000
rs75421114 lBF = `9.7401` Chr`15` : `98,217,518`	0.001	0.999	0.000
rs113920924 lBF = `0.0008265` Chr`15` : `72,498,937`	0.001	0.999	0.000
rs2238355 lBF = `-0.0888031` Chr`15` : `92,685,778`	0.000	0.999	0.001
rs28479400 lBF = `4.3492` Chr`15` : `99,995,884`	0.001	0.999	0.000
rs11856574 lBF = `-0.0284494` Chr`15` : `29,731,444`	0.001	0.999	0.000
rs4778214 lBF = `-0.0310089` Chr`15` : `28,205,564`	0.001	0.999	0.000
rs75683534 lBF = `22.4278` Chr`15` : `65,116,390`	0.001	0.999	0.000
rs72732571 lBF = `15.1337` Chr`15` : `78,424,369`	0.001	0.999	0.000
rs117023793 lBF = `15.2441` Chr`15` : `32,065,095`	0.001	0.999	0.000
rs113441626 lBF = `0.00187247` Chr`15` : `72,107,174`	0.000	0.999	0.000
rs11072566 lBF = `-0.0530728` Chr`15` : `76,293,971`	0.001	0.999	0.000
rs10519131 lBF = `0.0467798` Chr`15` : `62,001,132`	0.001	0.999	0.000
rs10152207 lBF = `1.30611` Chr`15` : `38,129,779`	0.000	0.999	0.001
rs74249803 lBF = `0.0573818` Chr`15` : `81,705,750`	0.001	0.999	0.000
rs76065397 lBF = `0.0130401` Chr`15` : `36,196,925`	0.001	0.999	0.000
Affx-12152382 lBF = `7.18149` Chr`15` : `89,745,122`	0.001	0.999	0.000
rs785422 lBF = `-0.00430612` Chr`15` : `30,173,885`	0.000	0.999	0.001
rs12904863 lBF = `0.0986889` Chr`15` : `71,424,009`	0.001	0.999	0.000
rs744738 lBF = `0.00313677` Chr`15` : `96,372,629`	0.001	0.999	0.000
rs117458067 lBF = `15.4786` Chr`15` : `61,951,318`	0.001	0.999	0.000
rs4965598 lBF = `-0.0678203` Chr`15` : `100,759,614`	0.000	0.999	0.001
rs8033957 lBF = `0.413804` Chr`15` : `40,038,433`	0.001	0.999	0.000
rs77845309 lBF = `-0.0171763` Chr`15` : `46,475,346`	0.001	0.999	0.000
rs56062135 lBF = `22.0047` Chr`15` : `67,455,630`	0.000	0.999	0.001
rs4774830 lBF = `0.283711` Chr`15` : `56,116,231`	0.001	0.999	0.000
rs72743461 lBF = `21.8932` Chr`15` : `67,441,750`	0.000	0.999	0.001
rs117598275 lBF = `13.4863` Chr`15` : `26,580,611`	0.000	0.999	0.000
rs77701960 lBF = `10.9141` Chr`15` : `82,075,642`	0.000	0.999	0.001
rs112044143 lBF = `9.4375` Chr`15` : `33,800,749`	0.000	0.999	0.000
rs67839313 lBF = `-0.0282994` Chr`15` : `40,619,724`	0.000	0.999	0.001
rs17238859 lBF = `22.6845` Chr`15` : `56,957,179`	0.000	1.000	0.000
rs17228058 lBF = `21.7381` Chr`15` : `67,450,305`	0.000	1.000	0.000
rs7179432 lBF = `0.0531748` Chr`15` : `93,564,972`	0.000	1.000	0.000
rs1356410 lBF = `0.147653` Chr`15` : `42,434,837`	0.000	1.000	0.000
rs141668138 lBF = `0.014285` Chr`15` : `80,599,536`	0.000	1.000	0.000
rs76917273 lBF = `0.00233228` Chr`15` : `71,572,954`	0.000	1.000	0.000
rs17293632 lBF = `21.6143` Chr`15` : `67,442,596`	0.000	1.000	0.000
rs72744450 lBF = `6.48395` Chr`15` : `66,432,798`	0.000	1.000	0.000
rs12595668 lBF = `0.0164871` Chr`15` : `39,573,535`	0.000	1.000	0.000
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rs12899449 lBF = `-0.0568353` Chr`15` : `38,995,491`	0.000	1.000	0.000
rs8030136 lBF = `-0.0708881` Chr`15` : `25,022,988`	0.000	1.000	0.000
rs12592967 lBF = `-0.0836139` Chr`15` : `61,870,943`	0.000	1.000	0.000
rs148783236 lBF = `140.415` Chr`15` : `50,785,016`	0.000	1.000	0.000
rs899997 lBF = `18.2795` Chr`15` : `79,019,578`	0.000	1.000	0.000
rs8043119 lBF = `16.5105` Chr`15` : `79,061,002`	0.000	1.000	0.000
rs4886592 lBF = `12.6218` Chr`15` : `79,082,547`	0.000	1.000	0.000
rs2277546 lBF = `12.5381` Chr`15` : `79,083,376`	0.000	1.000	0.000
rs2277545 lBF = `12.5251` Chr`15` : `79,083,591`	0.000	1.000	0.000
rs12903203 lBF = `12.3822` Chr`15` : `79,084,933`	0.000	1.000	0.000
rs11631955 lBF = `12.3799` Chr`15` : `79,085,915`	0.000	1.000	0.000
rs2938671 lBF = `11.1176` Chr`15` : `78,732,754`	0.000	1.000	0.000
rs924840 lBF = `11.0346` Chr`15` : `78,731,808`	0.000	1.000	0.000
rs2656070 lBF = `10.9751` Chr`15` : `78,730,252`	0.000	1.000	0.000
rs74925218 lBF = `10.5539` Chr`15` : `78,796,732`	0.000	1.000	0.000
rs12101809 lBF = `10.4802` Chr`15` : `78,779,801`	0.000	1.000	0.000
rs117655850 lBF = `10.086` Chr`15` : `87,222,097`	0.000	1.000	0.000
rs2938674 lBF = `9.93244` Chr`15` : `78,757,913`	0.000	1.000	0.000
rs7174190 lBF = `9.73367` Chr`15` : `78,763,617`	0.000	1.000	0.000
rs28480606 lBF = `9.70409` Chr`15` : `78,762,313`	0.000	1.000	0.000
rs958025 lBF = `9.05584` Chr`15` : `78,759,348`	0.000	1.000	0.000
rs12898290 lBF = `8.08103` Chr`15` : `31,294,343`	0.000	1.000	0.000
rs10162934 lBF = `7.83475` Chr`15` : `35,541,843`	0.000	1.000	0.000
rs75592780 lBF = `7.58134` Chr`15` : `71,952,163`	0.000	1.000	0.000
rs4775078 lBF = `6.96311` Chr`15` : `45,165,400`	0.000	1.000	0.000
rs8032158 lBF = `4.57586` Chr`15` : `56,194,877`	0.000	1.000	0.000
rs74609360 lBF = `1.8041` Chr`15` : `31,540,395`	0.000	1.000	0.000
rs62024303 lBF = `0.664094` Chr`15` : `88,871,162`	0.000	1.000	0.000
rs17374222 lBF = `0.404833` Chr`15` : `69,995,344`	0.000	1.000	0.000
rs8042271 lBF = `0.345787` Chr`15` : `89,574,218`	0.000	1.000	0.000
rs10519210 lBF = `0.109365` Chr`15` : `63,737,925`	0.000	1.000	0.000
rs719714 lBF = `0.109178` Chr`15` : `53,279,378`	0.000	1.000	0.000
rs2412475 lBF = `0.0764129` Chr`15` : `40,334,576`	0.000	1.000	0.000
rs8038734 lBF = `0.0651081` Chr`15` : `72,811,402`	0.000	1.000	0.000
rs16977195 lBF = `0.0635692` Chr`15` : `86,984,240`	0.000	1.000	0.000
rs2120019 lBF = `0.0398977` Chr`15` : `75,334,184`	0.000	1.000	0.000
rs7179228 lBF = `0.0380638` Chr`15` : `68,622,347`	0.000	1.000	0.000
rs8039584 lBF = `0.0223932` Chr`15` : `74,305,966`	0.000	1.000	0.000
rs79604958 lBF = `0.0141016` Chr`15` : `75,929,991`	0.000	1.000	0.000
rs55966621 lBF = `0.0109487` Chr`15` : `81,137,076`	0.000	1.000	0.000
rs56050415 lBF = `0.00309945` Chr`15` : `58,574,966`	0.000	1.000	0.000
rs72744944 lBF = `-0.00103299` Chr`15` : `56,930,791`	0.000	1.000	0.000
rs311904 lBF = `-0.00265258` Chr`15` : `69,346,946`	0.000	1.000	0.000
rs1528473 lBF = `-0.0128636` Chr`15` : `55,386,743`	0.000	1.000	0.000
rs2007084 lBF = `-0.0169699` Chr`15` : `90,345,335`	0.000	1.000	0.000
rs2677744 lBF = `-0.0202142` Chr`15` : `91,450,441`	0.000	1.000	0.000
rs2871865 lBF = `-0.025259` Chr`15` : `99,194,896`	0.000	1.000	0.000
rs1801591 lBF = `-0.026735` Chr`15` : `76,578,762`	0.000	1.000	0.000
rs12899618 lBF = `-0.03096` Chr`15` : `71,645,120`	0.000	1.000	0.000
rs78153629 lBF = `-0.0642382` Chr`15` : `40,673,465`	0.000	1.000	0.000
rs3784609 lBF = `-0.0716229` Chr`15` : `60,910,550`	0.000	1.000	0.000
rs1869901 lBF = `-0.0914663` Chr`15` : `40,595,627`	0.000	1.000	0.000
rs11072800 lBF = `17.702` Chr`15` : `79,045,857`	0.000	1.000	0.000
rs7171171 lBF = `15.3328` Chr`15` : `38,907,041`	0.000	1.000	0.000
rs28395178 lBF = `13.7731` Chr`15` : `78,850,558`	0.000	1.000	0.000
rs117486084 lBF = `13.6827` Chr`15` : `27,086,879`	0.000	1.000	0.000
rs4886591 lBF = `13.1684` Chr`15` : `79,074,518`	0.000	1.000	0.000
rs12899147 lBF = `12.9814` Chr`15` : `79,079,512`	0.000	1.000	0.000
rs11858210 lBF = `12.875` Chr`15` : `79,078,358`	0.000	1.000	0.000
rs2904220 lBF = `12.8397` Chr`15` : `79,076,704`	0.000	1.000	0.000
rs1825087 lBF = `12.8373` Chr`15` : `79,077,114`	0.000	1.000	0.000
rs12050525 lBF = `12.7855` Chr`15` : `79,075,746`	0.000	1.000	0.000
rs11072803 lBF = `12.7352` Chr`15` : `79,077,878`	0.000	1.000	0.000
rs11639044 lBF = `12.4408` Chr`15` : `79,083,814`	0.000	1.000	0.000
rs12913260 lBF = `12.0735` Chr`15` : `79,071,095`	0.000	1.000	0.000
rs11632102 lBF = `11.961` Chr`15` : `79,086,057`	0.000	1.000	0.000
rs11072806 lBF = `11.8753` Chr`15` : `79,079,074`	0.000	1.000	0.000
rs11072783 lBF = `11.6644` Chr`15` : `78,965,966`	0.000	1.000	0.000
rs35474770 lBF = `11.4403` Chr`15` : `79,074,000`	0.000	1.000	0.000
rs2004038 lBF = `11.3758` Chr`15` : `79,071,406`	0.000	1.000	0.000
rs36061084 lBF = `11.3186` Chr`15` : `79,074,253`	0.000	1.000	0.000
rs2568485 lBF = `11.2894` Chr`15` : `78,752,114`	0.000	1.000	0.000
rs2568483 lBF = `10.989` Chr`15` : `78,752,343`	0.000	1.000	0.000
rs2568488 lBF = `10.9602` Chr`15` : `78,736,593`	0.000	1.000	0.000
rs2568493 lBF = `10.9512` Chr`15` : `78,740,233`	0.000	1.000	0.000
rs2568490 lBF = `10.9291` Chr`15` : `78,738,370`	0.000	1.000	0.000
rs2915695 lBF = `10.927` Chr`15` : `78,739,471`	0.000	1.000	0.000
rs2656069 lBF = `10.9258` Chr`15` : `78,745,707`	0.000	1.000	0.000
rs2656071 lBF = `10.9174` Chr`15` : `78,745,343`	0.000	1.000	0.000
rs2958719 lBF = `10.9043` Chr`15` : `78,743,029`	0.000	1.000	0.000
rs16969894 lBF = `10.8894` Chr`15` : `78,776,456`	0.000	1.000	0.000
rs2656073 lBF = `10.8682` Chr`15` : `78,742,276`	0.000	1.000	0.000
rs2656072 lBF = `10.8529` Chr`15` : `78,744,292`	0.000	1.000	0.000
rs7174348 lBF = `10.7242` Chr`15` : `78,792,439`	0.000	1.000	0.000
rs2036533 lBF = `10.5388` Chr`15` : `78,781,687`	0.000	1.000	0.000
rs28511883 lBF = `10.4965` Chr`15` : `78,783,683`	0.000	1.000	0.000
rs10851906 lBF = `10.4861` Chr`15` : `78,774,676`	0.000	1.000	0.000
rs35031105 lBF = `10.4116` Chr`15` : `78,772,806`	0.000	1.000	0.000
rs11072766 lBF = `10.1465` Chr`15` : `78,771,546`	0.000	1.000	0.000
rs2656055 lBF = `10.0344` Chr`15` : `78,720,194`	0.000	1.000	0.000
rs117473873 lBF = `9.65269` Chr`15` : `53,024,679`	0.000	1.000	0.000
rs2627323 lBF = `6.78206` Chr`15` : `81,021,383`	0.000	1.000	0.000
rs3784589 lBF = `6.65828` Chr`15` : `31,294,714`	0.000	1.000	0.000
rs80184563 lBF = `6.16302` Chr`15` : `79,151,207`	0.000	1.000	0.000
rs12917264 lBF = `5.01465` Chr`15` : `91,420,552`	0.000	1.000	0.000
rs1568679 lBF = `0.467715` Chr`15` : `37,349,802`	0.000	1.000	0.000
rs2290203 lBF = `0.222692` Chr`15` : `91,512,067`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9999

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.9997

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.9996

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.9957

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9931

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.9921

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.9846

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.9506

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.9500

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9468

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.9447

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.9442

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.9440

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.9339

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.9248

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.9225

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.9071

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.9005

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.9000

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.8826

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.8370

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.8310

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.8218

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.7915

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.7811

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.7753

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.7212

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.7206

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.6511

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.6005

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.6002

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.5712

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.4881

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.4375

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.4119

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.3769

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.3318

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.3258

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2914

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2404

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.1433

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.1302

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.1053

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.0970

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.0887

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0762

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.0623

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.0613

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0594

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0520

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	N80-N98 Noninflammatory disorders of female genital tract
Nested terms	N94.0 Mittelschmerz N94.1 Dyspareunia N94.2 Vaginismus N94.3 Premenstrual tension syndrome N94.4 Primary dysmenorrhoea N94.5 Secondary dysmenorrhoea N94.6 Dysmenorrhoea, unspecified N94.8 Other specified conditions associated with female genital organs and menstrual cycle N94.9 Unspecified condition associated with female genital organs and menstrual cycle

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)