TreeWAS – [N94] Pain and other conditions associated with female genital organs and menstrual cycle

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs34574480 lBF = `13.3586` Chr`12` : `115,307,567`	0.902	0.098	0.000
rs5742692 lBF = `2.17819` Chr`12` : `102,799,598`	0.902	0.098	0.000
rs117605016 lBF = `28.0976` Chr`12` : `129,614,385`	0.887	0.113	0.000
rs117091826 lBF = `24.5799` Chr`12` : `112,629,713`	0.831	0.169	0.000
rs2279695 lBF = `6.13321` Chr`12` : `117,154,262`	0.789	0.211	0.000
rs2292303 lBF = `0.924716` Chr`12` : `102,513,531`	0.789	0.211	0.000
rs73141422 lBF = `22.399` Chr`12` : `83,882,469`	0.775	0.225	0.000
rs2417373 lBF = `14.5305` Chr`12` : `14,744,468`	0.756	0.244	0.000
rs1291621 lBF = `15.6995` Chr`12` : `46,340,821`	0.737	0.263	0.000
rs144700679 lBF = `7.09223` Chr`12` : `115,468,959`	0.729	0.271	0.000
rs143136847 lBF = `1.54314` Chr`12` : `82,748,339`	0.718	0.282	0.000
rs181609621 lBF = `1.56948` Chr`12` : `32,810,759`	0.710	0.290	0.000
rs188610 lBF = `2.31323` Chr`12` : `313,839`	0.693	0.306	0.000
rs17102257 lBF = `14.6206` Chr`12` : `54,126,061`	0.664	0.336	0.000
rs215398 lBF = `19.4313` Chr`12` : `47,767,134`	0.661	0.339	0.000
rs117139804 lBF = `18.4888` Chr`12` : `116,233,671`	0.648	0.352	0.000
rs117437287 lBF = `16.5299` Chr`12` : `23,389,839`	0.629	0.371	0.000
rs112742247 lBF = `13.3959` Chr`12` : `85,030,619`	0.606	0.394	0.000
rs118079879 lBF = `5.09035` Chr`12` : `41,713,306`	0.598	0.402	0.000
rs79680354 lBF = `22.0763` Chr`12` : `119,361,070`	0.593	0.407	0.000
rs78221103 lBF = `16.6479` Chr`12` : `104,562,673`	0.590	0.410	0.000
rs182057829 lBF = `2.49683` Chr`12` : `97,412,327`	0.590	0.410	0.000
rs117929870 lBF = `16.9839` Chr`12` : `108,524,849`	0.522	0.478	0.000
rs117636037 lBF = `18.8537` Chr`12` : `38,519,375`	0.520	0.480	0.000
rs77821460 lBF = `20.1742` Chr`12` : `20,274,936`	0.512	0.488	0.000
rs78008978 lBF = `13.3787` Chr`12` : `77,282,680`	0.456	0.544	0.000
rs74910874 lBF = `2.61067` Chr`12` : `67,086,810`	0.445	0.555	0.000
rs75311705 lBF = `0.456159` Chr`12` : `125,714,596`	0.412	0.588	0.000
rs76409154 lBF = `20.1612` Chr`12` : `85,692,134`	0.412	0.588	0.000
rs12425131 lBF = `16.2355` Chr`12` : `82,984,879`	0.411	0.589	0.000
rs12582659 lBF = `4.82974` Chr`12` : `76,064,528`	0.404	0.596	0.000
rs6580622 lBF = `15.5075` Chr`12` : `47,936,778`	0.390	0.610	0.000
rs3809128 lBF = `2.10909` Chr`12` : `56,709,919`	0.353	0.647	0.000
rs7307123 lBF = `21.9581` Chr`12` : `54,524,397`	0.326	0.674	0.000
rs149104283 lBF = `2.00778` Chr`12` : `21,083,862`	0.321	0.678	0.000
rs61756485 lBF = `16.787` Chr`12` : `99,020,125`	0.319	0.681	0.000
rs117492744 lBF = `13.2788` Chr`12` : `29,747,631`	0.300	0.700	0.000
rs4149639 lBF = `0.234732` Chr`12` : `6,442,001`	0.300	0.700	0.000
rs114453043 lBF = `22.0948` Chr`12` : `25,461,756`	0.264	0.736	0.000
rs11175593 lBF = `2.45774` Chr`12` : `40,601,940`	0.254	0.746	0.000
rs7294372 lBF = `0.932637` Chr`12` : `114,637,423`	0.237	0.763	0.000
rs5744807 lBF = `13.1175` Chr`12` : `133,243,621`	0.185	0.815	0.000
rs12367448 lBF = `0.0638072` Chr`12` : `69,581,222`	0.160	0.840	0.000
rs117863495 lBF = `14.7593` Chr`12` : `129,432,374`	0.157	0.843	0.000
rs3794288 lBF = `0.216509` Chr`12` : `2,789,221`	0.132	0.868	0.000
rs116938548 lBF = `0.178688` Chr`12` : `4,808,251`	0.122	0.878	0.000
rs76242156 lBF = `19.5711` Chr`12` : `65,043,774`	0.114	0.886	0.000
rs10506821 lBF = `13.2804` Chr`12` : `80,496,923`	0.114	0.886	0.000
rs55783344 lBF = `0.0642843` Chr`12` : `121,432,299`	0.114	0.886	0.000
rs144288546 lBF = `0.146461` Chr`12` : `129,069,682`	0.113	0.887	0.000
rs141480969 lBF = `0.733874` Chr`12` : `62,496,278`	0.107	0.893	0.000
rs76796201 lBF = `14.1948` Chr`12` : `23,091,755`	0.104	0.896	0.000
rs73217910 lBF = `14.853` Chr`12` : `118,450,865`	0.102	0.898	0.000
rs79918060 lBF = `17.5524` Chr`12` : `58,407,669`	0.099	0.901	0.000
rs12370770 lBF = `24.384` Chr`12` : `112,277,084`	0.095	0.905	0.000
rs12371484 lBF = `19.7008` Chr`12` : `111,872,722`	0.095	0.905	0.000
rs78851502 lBF = `8.34221` Chr`12` : `40,811,944`	0.092	0.908	0.000
rs11115322 lBF = `13.8059` Chr`12` : `83,019,188`	0.087	0.913	0.000
rs12422544 lBF = `1.68441` Chr`12` : `40,528,432`	0.080	0.920	0.000
rs78321382 lBF = `14.0322` Chr`12` : `17,070,922`	0.076	0.924	0.000
rs11062987 lBF = `0.437239` Chr`12` : `4,173,126`	0.070	0.930	0.000
rs76001134 lBF = `19.3411` Chr`12` : `23,209,903`	0.066	0.934	0.000
rs117629949 lBF = `14.77` Chr`12` : `25,021,224`	0.065	0.935	0.000
rs78294386 lBF = `14.58` Chr`12` : `107,963,652`	0.064	0.936	0.000
rs17813263 lBF = `23.117` Chr`12` : `69,481,381`	0.060	0.940	0.000
rs35729753 lBF = `17.3029` Chr`12` : `66,672,379`	0.060	0.940	0.000
rs74911677 lBF = `20.5271` Chr`12` : `122,015,993`	0.059	0.940	0.000
rs73164250 lBF = `17.0593` Chr`12` : `84,624,334`	0.058	0.942	0.000
rs79015790 lBF = `14.8688` Chr`12` : `128,700,249`	0.056	0.944	0.000
rs16906714 lBF = `0.0571485` Chr`12` : `30,860,557`	0.055	0.945	0.000
rs189010983 lBF = `0.0387565` Chr`12` : `84,086,176`	0.051	0.949	0.000
rs117624816 lBF = `14.1981` Chr`12` : `18,210,143`	0.051	0.949	0.000
rs9332958 lBF = `5.25634` Chr`12` : `16,519,263`	0.048	0.952	0.000
rs12322695 lBF = `0.0399753` Chr`12` : `117,199,414`	0.047	0.953	0.000
rs7294478 lBF = `0.0189422` Chr`12` : `7,266,805`	0.042	0.958	0.000
rs2608700 lBF = `16.0704` Chr`12` : `41,884,414`	0.036	0.964	0.000
rs2290720 lBF = `-0.0843582` Chr`12` : `101,687,043`	0.036	0.964	0.000
rs188255132 lBF = `0.0230843` Chr`12` : `81,723,188`	0.030	0.970	0.000
rs199710891 lBF = `5.87106` Chr`12` : `14,273,071`	0.027	0.973	0.000
rs183825572 lBF = `0.0255777` Chr`12` : `101,264,845`	0.027	0.973	0.000
rs144148493 lBF = `0.015726` Chr`12` : `87,360,221`	0.025	0.975	0.000
rs73313995 lBF = `22.0276` Chr`12` : `33,622,807`	0.022	0.978	0.000
rs77628219 lBF = `0.0129624` Chr`12` : `87,404,130`	0.021	0.979	0.000
rs187039407 lBF = `0.0120709` Chr`12` : `87,341,774`	0.021	0.979	0.000
rs11180992 lBF = `0.0137073` Chr`12` : `41,940,664`	0.020	0.980	0.000
rs75289085 lBF = `19.4964` Chr`12` : `18,147,653`	0.019	0.981	0.000
rs80160299 lBF = `15.0308` Chr`12` : `66,159,224`	0.018	0.982	0.000
rs80132640 lBF = `11.0963` Chr`12` : `49,426,460`	0.018	0.982	0.000
rs80002652 lBF = `18.6612` Chr`12` : `107,437,422`	0.017	0.983	0.000
rs117761474 lBF = `15.8826` Chr`12` : `113,029,356`	0.017	0.983	0.000
rs77662038 lBF = `13.6756` Chr`12` : `83,497,229`	0.017	0.983	0.000
rs79476482 lBF = `14.9329` Chr`12` : `76,084,550`	0.017	0.983	0.000
rs75626916 lBF = `11.7941` Chr`12` : `108,663,870`	0.014	0.985	0.000
rs4238083 lBF = `14.8083` Chr`12` : `42,924,769`	0.014	0.986	0.000
rs4594074 lBF = `0.0140546` Chr`12` : `41,032,092`	0.014	0.986	0.000
rs34934130 lBF = `11.9795` Chr`12` : `121,502,913`	0.014	0.986	0.000
rs11611673 lBF = `13.5862` Chr`12` : `121,451,150`	0.013	0.987	0.000
rs142494129 lBF = `0.0386533` Chr`12` : `95,161,353`	0.013	0.987	0.000
rs11044722 lBF = `15.4222` Chr`12` : `19,781,710`	0.013	0.987	0.000
rs10506418 lBF = `0.0272495` Chr`12` : `61,488,772`	0.012	0.988	0.000
rs73201485 lBF = `11.279` Chr`12` : `114,791,319`	0.012	0.988	0.000
rs1235153 lBF = `9.04692` Chr`12` : `48,110,325`	0.011	0.989	0.000
rs76859191 lBF = `0.57087` Chr`12` : `114,545,274`	0.011	0.989	0.000
rs187293782 lBF = `0.0145963` Chr`12` : `76,157,356`	0.011	0.989	0.000
rs2722223 lBF = `24.9818` Chr`12` : `90,233,876`	0.011	0.989	0.000
rs139236384 lBF = `0.00601029` Chr`12` : `82,550,025`	0.010	0.989	0.000
rs117802803 lBF = `21.4181` Chr`12` : `22,796,804`	0.000	0.990	0.010
rs187035304 lBF = `0.00715419` Chr`12` : `87,229,742`	0.010	0.990	0.000
rs117409850 lBF = `13.4266` Chr`12` : `106,057,582`	0.007	0.991	0.002
rs11564258 lBF = `0.0464349` Chr`12` : `40,792,300`	0.009	0.991	0.000
rs17432871 lBF = `6.59959` Chr`12` : `121,542,128`	0.008	0.992	0.000
rs11608709 lBF = `15.4681` Chr`12` : `99,302,859`	0.008	0.992	0.000
rs1388585 lBF = `0.675794` Chr`12` : `40,531,691`	0.000	0.993	0.007
rs11108227 lBF = `16.4201` Chr`12` : `96,134,001`	0.007	0.993	0.000
rs183244340 lBF = `0.0050197` Chr`12` : `87,005,576`	0.007	0.993	0.000
rs2733283 lBF = `17.1055` Chr`12` : `41,935,977`	0.007	0.993	0.000
rs187353341 lBF = `19.0434` Chr`12` : `121,557,376`	0.006	0.994	0.000
rs17126180 lBF = `0.00493889` Chr`12` : `52,263,956`	0.000	0.994	0.005
rs17443266 lBF = `15.2354` Chr`12` : `19,169,453`	0.005	0.994	0.000
rs76582905 lBF = `0.00276703` Chr`12` : `130,466,631`	0.005	0.995	0.000
rs10773971 lBF = `-0.0157233` Chr`12` : `1,740,171`	0.005	0.995	0.000
rs118113273 lBF = `22.5923` Chr`12` : `128,300,100`	0.005	0.995	0.000
rs183032784 lBF = `0.00474184` Chr`12` : `118,257,214`	0.005	0.995	0.000
rs117458579 lBF = `15.4218` Chr`12` : `15,351,989`	0.005	0.995	0.000
rs12321507 lBF = `16.2879` Chr`12` : `96,134,818`	0.005	0.995	0.000
rs117029533 lBF = `21.9889` Chr`12` : `66,632,067`	0.005	0.995	0.000
rs55922880 lBF = `0.00435799` Chr`12` : `115,617,641`	0.005	0.995	0.000
rs74565952 lBF = `16.1651` Chr`12` : `71,112,797`	0.005	0.995	0.000
rs12423247 lBF = `0.921356` Chr`12` : `96,858,362`	0.004	0.995	0.000
rs117303215 lBF = `9.21583` Chr`12` : `129,627,812`	0.005	0.995	0.000
rs116877397 lBF = `30.7668` Chr`12` : `121,162,996`	0.004	0.996	0.000
rs73040424 lBF = `7.46879` Chr`12` : `5,665,454`	0.004	0.996	0.000
rs7307889 lBF = `7.08994` Chr`12` : `5,981,353`	0.004	0.996	0.000
rs3951439 lBF = `0.0044521` Chr`12` : `51,727,596`	0.000	0.996	0.004
rs1040026 lBF = `0.00233431` Chr`12` : `71,210,678`	0.003	0.996	0.000
rs941184 lBF = `0.00357459` Chr`12` : `54,114,158`	0.003	0.996	0.000
rs7305482 lBF = `8.02751` Chr`12` : `62,582,231`	0.000	0.996	0.004
rs11615866 lBF = `-0.0472723` Chr`12` : `5,393,329`	0.000	0.996	0.004
rs76177788 lBF = `0.0120066` Chr`12` : `86,544,239`	0.003	0.996	0.000
rs59753639 lBF = `4.25806` Chr`12` : `25,140,690`	0.003	0.996	0.000
rs7961894 lBF = `0.152119` Chr`12` : `122,365,583`	0.003	0.997	0.000
rs7137521 lBF = `0.00252492` Chr`12` : `126,734,269`	0.003	0.997	0.000
rs56360506 lBF = `10.2114` Chr`12` : `53,222,800`	0.003	0.997	0.000
rs75876943 lBF = `15.0045` Chr`12` : `86,555,845`	0.003	0.997	0.000
rs183160876 lBF = `0.00279977` Chr`12` : `82,463,439`	0.003	0.997	0.000
rs73114523 lBF = `14.6366` Chr`12` : `54,602,032`	0.003	0.997	0.000
rs137949660 lBF = `0.0004879` Chr`12` : `117,933,500`	0.000	0.997	0.003
rs190909796 lBF = `0.00805551` Chr`12` : `80,474,682`	0.003	0.997	0.000
rs182328274 lBF = `0.0032004` Chr`12` : `107,667,802`	0.002	0.997	0.000
rs11065791 lBF = `12.9532` Chr`12` : `111,460,000`	0.003	0.997	0.000
rs7309269 lBF = `13.6679` Chr`12` : `7,757,834`	0.003	0.997	0.000
rs7313402 lBF = `-0.0546356` Chr`12` : `108,602,970`	0.000	0.997	0.003
rs34637584 lBF = `0.00195999` Chr`12` : `40,734,202`	0.002	0.997	0.000
rs11174812 lBF = `-0.0137106` Chr`12` : `40,425,087`	0.003	0.997	0.000
rs76270203 lBF = `1.90441` Chr`12` : `113,936,996`	0.003	0.997	0.000
rs139660738 lBF = `0.00949875` Chr`12` : `95,185,188`	0.000	0.997	0.003
rs1520223 lBF = `0.00239145` Chr`12` : `102,726,338`	0.002	0.998	0.000
rs12582852 lBF = `14.3759` Chr`12` : `3,315,933`	0.002	0.998	0.000
rs117626015 lBF = `0.00164872` Chr`12` : `41,624,795`	0.002	0.998	0.000
rs12813285 lBF = `22.3499` Chr`12` : `68,206,219`	0.002	0.998	0.000
rs1653608 lBF = `16.5227` Chr`12` : `121,706,733`	0.002	0.998	0.000
rs4149018 lBF = `0.00161931` Chr`12` : `21,291,561`	0.002	0.998	0.000
rs181947843 lBF = `0.00335065` Chr`12` : `108,547,387`	0.002	0.998	0.000
rs2066808 lBF = `0.103548` Chr`12` : `56,737,973`	0.000	0.998	0.002
rs115720202 lBF = `18.7627` Chr`12` : `89,746,581`	0.002	0.998	0.000
rs142054194 lBF = `0.0063675` Chr`12` : `86,864,240`	0.002	0.998	0.000
rs11061269 lBF = `0.0538437` Chr`12` : `131,456,449`	0.000	0.998	0.002
rs76775795 lBF = `13.6666` Chr`12` : `115,385,431`	0.002	0.998	0.000
rs188024766 lBF = `0.00093228` Chr`12` : `101,353,534`	0.002	0.998	0.000
rs17466626 lBF = `0.0332799` Chr`12` : `40,760,631`	0.002	0.998	0.000
rs2020854 lBF = `0.0803119` Chr`12` : `56,743,367`	0.000	0.998	0.002
rs1265565 lBF = `23.6926` Chr`12` : `111,715,197`	0.000	0.998	0.002
rs17040357 lBF = `13.7026` Chr`12` : `108,665,316`	0.002	0.998	0.000
rs11575234 lBF = `0.0815188` Chr`12` : `56,744,276`	0.000	0.998	0.002
rs79002142 lBF = `11.7979` Chr`12` : `85,143,591`	0.002	0.998	0.000
rs140444490 lBF = `0.00607512` Chr`12` : `86,860,976`	0.002	0.998	0.000
rs117759274 lBF = `14.7453` Chr`12` : `23,131,855`	0.002	0.998	0.000
rs11174454 lBF = `8.97302` Chr`12` : `62,781,002`	0.000	0.998	0.002
rs11609031 lBF = `16.3836` Chr`12` : `99,307,725`	0.002	0.998	0.000
rs192256367 lBF = `0.00111823` Chr`12` : `107,648,405`	0.001	0.998	0.000
rs186879571 lBF = `0.0106335` Chr`12` : `128,652,831`	0.001	0.998	0.000
rs12304921 lBF = `-0.00652912` Chr`12` : `51,357,542`	0.000	0.998	0.002
rs76450399 lBF = `14.1937` Chr`12` : `9,143,781`	0.001	0.998	0.000
rs2066807 lBF = `0.0731955` Chr`12` : `56,740,682`	0.000	0.998	0.002
rs4534636 lBF = `-0.0481322` Chr`12` : `8,666,801`	0.001	0.999	0.000
rs12580533 lBF = `0.06281` Chr`12` : `129,646,601`	0.000	0.999	0.001
rs11055387 lBF = `-0.012726` Chr`12` : `13,519,996`	0.000	0.999	0.001
rs499368 lBF = `-0.00108169` Chr`12` : `320,920`	0.001	0.999	0.000
rs678069 lBF = `-0.0175837` Chr`12` : `53,102,196`	0.000	0.999	0.001
rs12580240 lBF = `0.0613231` Chr`12` : `129,646,572`	0.000	0.999	0.001
rs76595471 lBF = `13.0273` Chr`12` : `80,228,443`	0.001	0.999	0.000
rs181697701 lBF = `0.00035088` Chr`12` : `107,611,050`	0.001	0.999	0.000
rs12230170 lBF = `6.64286` Chr`12` : `129,247,383`	0.001	0.999	0.000
rs184699315 lBF = `0.00049337` Chr`12` : `71,650,779`	0.001	0.999	0.000
rs2066819 lBF = `0.0817399` Chr`12` : `56,750,204`	0.000	0.999	0.001
rs2343873 lBF = `0.0466979` Chr`12` : `26,404,298`	0.000	0.999	0.001
rs111341849 lBF = `13.9983` Chr`12` : `83,961,998`	0.001	0.999	0.000
rs4298948 lBF = `0.0247646` Chr`12` : `122,276,255`	0.001	0.999	0.000
rs140785266 lBF = `0.00305033` Chr`12` : `86,195,923`	0.001	0.999	0.000
rs7974425 lBF = `0.00058097` Chr`12` : `60,735,173`	0.001	0.999	0.000
rs12282 lBF = `0.00394501` Chr`12` : `133,345,809`	0.001	0.999	0.000
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rs17431357 lBF = `-0.025961` Chr`12` : `120,880,434`	0.000	1.000	0.000
rs10860964 lBF = `-0.0515588` Chr`12` : `103,596,455`	0.000	1.000	0.000
rs12828102 lBF = `-0.087418` Chr`12` : `91,310,019`	0.000	1.000	0.000
rs4240748 lBF = `-0.0974669` Chr`12` : `92,246,786`	0.000	1.000	0.000
rs11059555 lBF = `14.4188` Chr`12` : `128,646,039`	0.000	1.000	0.000
rs12308914 lBF = `12.8877` Chr`12` : `104,633,842`	0.000	1.000	0.000
rs111825271 lBF = `10.5466` Chr`12` : `66,344,706`	0.000	1.000	0.000
rs58116261 lBF = `8.77788` Chr`12` : `112,935,344`	0.000	1.000	0.000
rs77572683 lBF = `7.85519` Chr`12` : `114,261,767`	0.000	1.000	0.000
rs116962450 lBF = `7.81708` Chr`12` : `90,500,741`	0.000	1.000	0.000
rs73200436 lBF = `2.81861` Chr`12` : `110,062,693`	0.000	1.000	0.000
rs13328933 lBF = `0.0463028` Chr`12` : `41,353,749`	0.000	1.000	0.000
rs139680557 lBF = `0.0111233` Chr`12` : `108,061,589`	0.000	1.000	0.000
rs1513049 lBF = `0.00460279` Chr`12` : `17,362,816`	0.000	1.000	0.000
rs9971637 lBF = `-0.00275548` Chr`12` : `17,373,739`	0.000	1.000	0.000
rs11109142 lBF = `-0.00930259` Chr`12` : `98,027,691`	0.000	1.000	0.000
rs7397814 lBF = `-0.0166476` Chr`12` : `9,546,962`	0.000	1.000	0.000
rs11104850 lBF = `-0.0551187` Chr`12` : `88,787,663`	0.000	1.000	0.000
rs7968270 lBF = `-0.0660084` Chr`12` : `95,095,838`	0.000	1.000	0.000
rs192051543 lBF = `14.1247` Chr`12` : `22,657,770`	0.000	1.000	0.000
rs1528287 lBF = `13.6349` Chr`12` : `80,985,872`	0.000	1.000	0.000
rs11057864 lBF = `6.42106` Chr`12` : `125,335,950`	0.000	1.000	0.000
rs3181157 lBF = `0.0176733` Chr`12` : `6,308,523`	0.000	1.000	0.000
rs1520832 lBF = `0.0100874` Chr`12` : `43,253,415`	0.000	1.000	0.000
rs2120771 lBF = `0.00465368` Chr`12` : `23,639,917`	0.000	1.000	0.000
rs76569837 lBF = `0.00029194` Chr`12` : `45,959,763`	0.000	1.000	0.000
rs11060736 lBF = `-0.0122292` Chr`12` : `130,630,935`	0.000	1.000	0.000
rs6488099 lBF = `-0.0153924` Chr`12` : `33,035,483`	0.000	1.000	0.000
rs17184007 lBF = `-0.0163909` Chr`12` : `67,594,578`	0.000	1.000	0.000
rs144850704 lBF = `-0.0207004` Chr`12` : `118,062,074`	0.000	1.000	0.000
rs4763555 lBF = `-0.0335163` Chr`12` : `10,721,456`	0.000	1.000	0.000
rs11069062 lBF = `-0.06` Chr`12` : `119,163,079`	0.000	1.000	0.000
rs10783624 lBF = `-0.0622892` Chr`12` : `39,522,907`	0.000	1.000	0.000
rs297941 lBF = `-0.0641366` Chr`12` : `50,319,086`	0.000	1.000	0.000
rs416350 lBF = `0.377076` Chr`12` : `68,779,413`	0.000	1.000	0.000
rs11065611 lBF = `0.0973389` Chr`12` : `110,704,487`	0.000	1.000	0.000
rs1442190 lBF = `0.0041724` Chr`12` : `41,365,640`	0.000	1.000	0.000
rs275380 lBF = `-0.0100521` Chr`12` : `43,929,996`	0.000	1.000	0.000
rs2239181 lBF = `-0.0189337` Chr`12` : `48,255,949`	0.000	1.000	0.000
rs17291650 lBF = `-0.0237825` Chr`12` : `51,213,433`	0.000	1.000	0.000
rs1873386 lBF = `-0.0245441` Chr`12` : `19,052,180`	0.000	1.000	0.000
rs61745943 lBF = `-0.0420207` Chr`12` : `92,562,407`	0.000	1.000	0.000
rs12821981 lBF = `18.716` Chr`12` : `2,741,217`	0.000	1.000	0.000
rs1265566 lBF = `13.2222` Chr`12` : `111,716,376`	0.000	1.000	0.000
rs11175997 lBF = `12.485` Chr`12` : `66,401,444`	0.000	1.000	0.000
rs117559199 lBF = `8.42044` Chr`12` : `75,424,551`	0.000	1.000	0.000
rs73110464 lBF = `4.11756` Chr`12` : `53,312,612`	0.000	1.000	0.000
rs116910038 lBF = `0.0694182` Chr`12` : `85,424,093`	0.000	1.000	0.000
rs10844154 lBF = `0.035124` Chr`12` : `32,380,501`	0.000	1.000	0.000
rs74377925 lBF = `0.0293844` Chr`12` : `16,699,250`	0.000	1.000	0.000
rs1057510 lBF = `0.0192049` Chr`12` : `6,683,287`	0.000	1.000	0.000
rs17429217 lBF = `0.00288289` Chr`12` : `117,295,333`	0.000	1.000	0.000
rs7312774 lBF = `0.00218812` Chr`12` : `107,305,728`	0.000	1.000	0.000
rs10848820 lBF = `-0.00858932` Chr`12` : `3,296,948`	0.000	1.000	0.000
rs117595305 lBF = `-0.00996742` Chr`12` : `19,052,763`	0.000	1.000	0.000
rs10771515 lBF = `-0.019467` Chr`12` : `9,463,806`	0.000	1.000	0.000
rs11175194 lBF = `-0.0229417` Chr`12` : `64,264,837`	0.000	1.000	0.000
rs201412 lBF = `-0.033668` Chr`12` : `99,290,313`	0.000	1.000	0.000
rs11059374 lBF = `-0.0415106` Chr`12` : `128,304,418`	0.000	1.000	0.000
rs11104877 lBF = `-0.0453462` Chr`12` : `88,837,244`	0.000	1.000	0.000
rs4761659 lBF = `-0.0524421` Chr`12` : `93,687,084`	0.000	1.000	0.000
rs1247943 lBF = `12.2287` Chr`12` : `114,673,421`	0.000	1.000	0.000
rs7488011 lBF = `12.0453` Chr`12` : `9,925,336`	0.000	1.000	0.000
rs9300286 lBF = `6.33079` Chr`12` : `128,617,839`	0.000	1.000	0.000
rs57866673 lBF = `6.11134` Chr`12` : `112,633,304`	0.000	1.000	0.000
rs4357753 lBF = `5.99351` Chr`12` : `112,740,709`	0.000	1.000	0.000
rs80130819 lBF = `1.17567` Chr`12` : `48,419,618`	0.000	1.000	0.000
rs11059635 lBF = `0.31419` Chr`12` : `128,782,022`	0.000	1.000	0.000
rs3741414 lBF = `0.0991612` Chr`12` : `57,844,049`	0.000	1.000	0.000
rs10849689 lBF = `0.0794566` Chr`12` : `110,493,222`	0.000	1.000	0.000
rs7304057 lBF = `0.0675331` Chr`12` : `131,352,562`	0.000	1.000	0.000
rs11105956 lBF = `0.0534094` Chr`12` : `91,447,523`	0.000	1.000	0.000
rs12296850 lBF = `0.0454461` Chr`12` : `100,820,085`	0.000	1.000	0.000
rs703556 lBF = `0.0322573` Chr`12` : `103,011,894`	0.000	1.000	0.000
rs77956314 lBF = `0.0185577` Chr`12` : `117,323,367`	0.000	1.000	0.000
rs73200449 lBF = `0.0158231` Chr`12` : `110,078,967`	0.000	1.000	0.000
rs2074193 lBF = `0.00630109` Chr`12` : `47,771,429`	0.000	1.000	0.000
rs61144803 lBF = `0.00541419` Chr`12` : `94,235,165`	0.000	1.000	0.000
rs17095830 lBF = `-0.0101787` Chr`12` : `45,774,908`	0.000	1.000	0.000
rs10861905 lBF = `-0.0137031` Chr`12` : `108,767,333`	0.000	1.000	0.000
rs12817211 lBF = `-0.0524559` Chr`12` : `50,579,398`	0.000	1.000	0.000
rs2358944 lBF = `-0.0551078` Chr`12` : `66,117,558`	0.000	1.000	0.000
rs17528414 lBF = `17.7734` Chr`12` : `32,352,055`	0.000	1.000	0.000
rs7979473 lBF = `17.2621` Chr`12` : `121,420,260`	0.000	1.000	0.000
rs17722134 lBF = `13.8489` Chr`12` : `72,401,694`	0.000	1.000	0.000
rs78574971 lBF = `12.9395` Chr`12` : `52,023,925`	0.000	1.000	0.000
rs78730305 lBF = `9.92833` Chr`12` : `104,669,564`	0.000	1.000	0.000
rs11045000 lBF = `7.56762` Chr`12` : `20,184,146`	0.000	1.000	0.000
rs16941724 lBF = `5.97011` Chr`12` : `112,327,057`	0.000	1.000	0.000
rs79335261 lBF = `5.7548` Chr`12` : `56,497,641`	0.000	1.000	0.000
rs10506458 lBF = `2.80462` Chr`12` : `63,445,092`	0.000	1.000	0.000
rs138477082 lBF = `2.62368` Chr`12` : `103,796,611`	0.000	1.000	0.000
rs2657888 lBF = `0.221785` Chr`12` : `56,938,383`	0.000	1.000	0.000
rs73206853 lBF = `0.220246` Chr`12` : `110,708,746`	0.000	1.000	0.000
rs11067228 lBF = `0.159121` Chr`12` : `115,094,260`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9999

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.9997

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.9996

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.9957

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9931

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.9921

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.9846

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.9506

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.9500

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9468

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.9447

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.9442

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.9440

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.9339

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.9248

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.9225

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.9071

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.9005

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.9000

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.8826

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.8370

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.8310

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.8218

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.7915

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.7811

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.7753

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.7212

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.7206

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.6511

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.6005

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.6002

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.5712

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.4881

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.4375

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.4119

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.3769

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.3318

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.3258

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2914

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2404

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.1433

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.1302

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.1053

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.0970

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.0887

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0762

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.0623

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.0613

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0594

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0520

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	N80-N98 Noninflammatory disorders of female genital tract
Nested terms	N94.0 Mittelschmerz N94.1 Dyspareunia N94.2 Vaginismus N94.3 Premenstrual tension syndrome N94.4 Primary dysmenorrhoea N94.5 Secondary dysmenorrhoea N94.6 Dysmenorrhoea, unspecified N94.8 Other specified conditions associated with female genital organs and menstrual cycle N94.9 Unspecified condition associated with female genital organs and menstrual cycle

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)