TreeWAS – [C50.3] Lower-inner quadrant of breast

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs118166304 lBF = `25.1727` Chr`17` : `48,951,566`	0.739	0.261	0.000
rs7221713 lBF = `15.6984` Chr`17` : `59,735,398`	0.729	0.271	0.000
rs74471121 lBF = `15.6908` Chr`17` : `6,108,771`	0.704	0.296	0.000
rs142643109 lBF = `4.78759` Chr`17` : `60,387,921`	0.699	0.301	0.000
rs58842514 lBF = `17.5944` Chr`17` : `76,367,270`	0.635	0.364	0.000
rs62076101 lBF = `21.8133` Chr`17` : `45,882,243`	0.583	0.416	0.000
rs73335365 lBF = `15.72` Chr`17` : `6,140,995`	0.561	0.438	0.000
rs72831252 lBF = `7.09209` Chr`17` : `57,411,671`	0.555	0.445	0.000
rs143813799 lBF = `18.0084` Chr`17` : `60,023,795`	0.526	0.474	0.000
rs76669440 lBF = `11.74` Chr`17` : `77,785,900`	0.471	0.529	0.000
rs295891 lBF = `12.2585` Chr`17` : `35,117,132`	0.454	0.546	0.000
rs79549931 lBF = `22.7675` Chr`17` : `66,178,996`	0.450	0.550	0.000
rs74969489 lBF = `14.9351` Chr`17` : `45,452,257`	0.432	0.568	0.000
rs117156109 lBF = `29.2944` Chr`17` : `75,856,929`	0.419	0.581	0.000
rs17698922 lBF = `5.59711` Chr`17` : `64,504,409`	0.414	0.586	0.000
rs62078063 lBF = `17.445` Chr`17` : `34,286,452`	0.410	0.590	0.000
rs147068743 lBF = `2.09018` Chr`17` : `1,363,475`	0.404	0.596	0.000
rs6258 lBF = `5.18323` Chr`17` : `7,534,678`	0.395	0.605	0.000
rs117032670 lBF = `19.5025` Chr`17` : `7,807,438`	0.391	0.609	0.000
rs190627217 lBF = `13.7219` Chr`17` : `45,811,915`	0.374	0.626	0.000
rs117611723 lBF = `13.8737` Chr`17` : `35,913,589`	0.370	0.630	0.000
rs75003023 lBF = `19.4031` Chr`17` : `75,537,040`	0.334	0.666	0.000
rs12600691 lBF = `11.8554` Chr`17` : `75,535,526`	0.332	0.668	0.000
rs77855512 lBF = `16.0644` Chr`17` : `12,141,091`	0.320	0.679	0.000
rs78378222 lBF = `67.1003` Chr`17` : `7,571,752`	0.317	0.683	0.000
rs61753150 lBF = `23.5631` Chr`17` : `15,973,774`	0.296	0.704	0.000
rs117337372 lBF = `13.2949` Chr`17` : `11,026,937`	0.285	0.715	0.000
rs181807530 lBF = `6.07401` Chr`17` : `4,774,814`	0.281	0.719	0.000
rs79989254 lBF = `16.0938` Chr`17` : `63,468,858`	0.270	0.730	0.000
rs62072914 lBF = `10.3081` Chr`17` : `79,332,221`	0.265	0.735	0.000
rs117180213 lBF = `18.1114` Chr`17` : `46,070,227`	0.261	0.739	0.000
rs8066099 lBF = `8.67262` Chr`17` : `14,889,925`	0.259	0.741	0.000
rs116920450 lBF = `24.9206` Chr`17` : `48,653,130`	0.239	0.761	0.000
rs8072843 lBF = `1.06281` Chr`17` : `54,638,948`	0.233	0.766	0.000
rs7211756 lBF = `2.27651` Chr`17` : `15,899,675`	0.223	0.777	0.000
rs79719602 lBF = `22.0554` Chr`17` : `68,033,186`	0.209	0.791	0.000
rs72820359 lBF = `9.17012` Chr`17` : `1,523,967`	0.208	0.791	0.000
rs34289250 lBF = `9.46458` Chr`17` : `59,880,646`	0.208	0.792	0.000
rs76597414 lBF = `16.1863` Chr`17` : `72,191,445`	0.194	0.805	0.000
rs117140019 lBF = `22.4153` Chr`17` : `27,396,153`	0.191	0.808	0.001
rs75418188 lBF = `2.82841` Chr`17` : `6,945,483`	0.185	0.815	0.000
rs117478093 lBF = `18.0142` Chr`17` : `6,027,422`	0.184	0.816	0.000
rs61735289 lBF = `10.6259` Chr`17` : `73,747,128`	0.183	0.817	0.000
rs12943829 lBF = `1.06626` Chr`17` : `70,826,404`	0.181	0.818	0.001
rs35850753 lBF = `52.2551` Chr`17` : `7,578,671`	0.176	0.824	0.000
rs75493593 lBF = `2.71768` Chr`17` : `6,945,087`	0.168	0.831	0.000
rs76731769 lBF = `14.8647` Chr`17` : `35,063,138`	0.153	0.846	0.000
rs74986892 lBF = `9.97307` Chr`17` : `12,326,683`	0.142	0.858	0.000
rs74577983 lBF = `12.6549` Chr`17` : `5,392,791`	0.141	0.859	0.000
rs16969149 lBF = `15.1993` Chr`17` : `74,640,113`	0.138	0.862	0.000
rs1805465 lBF = `0.666865` Chr`17` : `5,393,089`	0.133	0.866	0.000
rs116847944 lBF = `14.8527` Chr`17` : `32,238,030`	0.123	0.877	0.000
rs181387571 lBF = `18.0545` Chr`17` : `16,249,665`	0.122	0.877	0.000
rs193042029 lBF = `0.233194` Chr`17` : `4,667,984`	0.117	0.883	0.000
rs78133126 lBF = `12.6154` Chr`17` : `16,345,753`	0.117	0.883	0.000
rs72845883 lBF = `14.3782` Chr`17` : `61,658,297`	0.112	0.888	0.000
rs55749608 lBF = `15.2225` Chr`17` : `3,800,118`	0.112	0.888	0.000
rs117647575 lBF = `15.1304` Chr`17` : `71,591,669`	0.111	0.888	0.000
rs117010525 lBF = `14.7473` Chr`17` : `46,605,689`	0.104	0.896	0.000
rs113937434 lBF = `20.1272` Chr`17` : `34,313,674`	0.087	0.913	0.000
rs11652466 lBF = `5.34235` Chr`17` : `56,061,709`	0.084	0.916	0.000
rs117024145 lBF = `17.1515` Chr`17` : `8,005,847`	0.080	0.920	0.000
rs116996274 lBF = `16.8749` Chr`17` : `72,204,105`	0.074	0.926	0.000
rs2663357 lBF = `14.3146` Chr`17` : `811,874`	0.072	0.928	0.000
rs12603526 lBF = `5.55678` Chr`17` : `800,593`	0.071	0.929	0.000
rs117891146 lBF = `16.7401` Chr`17` : `77,212,307`	0.069	0.930	0.000
rs75238886 lBF = `22.8661` Chr`17` : `34,313,612`	0.070	0.930	0.000
rs74252946 lBF = `13.4758` Chr`17` : `10,125,196`	0.064	0.936	0.000
rs116971837 lBF = `14.357` Chr`17` : `8,680,917`	0.061	0.938	0.000
rs116965022 lBF = `11.9178` Chr`17` : `15,764,366`	0.054	0.945	0.000
rs117654928 lBF = `7.86182` Chr`17` : `72,690,643`	0.053	0.946	0.000
rs111816999 lBF = `0.159181` Chr`17` : `6,882,443`	0.052	0.948	0.000
rs79169085 lBF = `7.81341` Chr`17` : `46,297,515`	0.049	0.950	0.001
rs34422007 lBF = `9.49411` Chr`17` : `40,248,644`	0.048	0.952	0.000
rs4788957 lBF = `12.6822` Chr`17` : `74,924,327`	0.045	0.955	0.000
rs117813251 lBF = `20.0984` Chr`17` : `74,197,931`	0.040	0.959	0.000
rs8753 lBF = `31.436` Chr`17` : `7,417,640`	0.035	0.964	0.001
rs78726323 lBF = `10.6127` Chr`17` : `45,944,894`	0.034	0.966	0.000
rs11571358 lBF = `14.967` Chr`17` : `6,899,106`	0.029	0.966	0.005
rs79404002 lBF = `0.695367` Chr`17` : `4,697,255`	0.033	0.967	0.000
rs74976893 lBF = `0.505264` Chr`17` : `69,729,925`	0.030	0.970	0.000
rs78288136 lBF = `13.1867` Chr`17` : `12,422,621`	0.029	0.970	0.000
rs114144436 lBF = `12.5218` Chr`17` : `2,832,984`	0.028	0.972	0.000
rs11652121 lBF = `15.4813` Chr`17` : `28,532,332`	0.002	0.973	0.025
rs12051658 lBF = `12.3416` Chr`17` : `34,315,633`	0.026	0.974	0.000
rs17879146 lBF = `0.0318342` Chr`17` : `76,219,945`	0.025	0.975	0.000
rs854625 lBF = `15.4246` Chr`17` : `34,328,461`	0.025	0.975	0.000
rs77542162 lBF = `16.8585` Chr`17` : `67,081,278`	0.024	0.975	0.001
rs117174162 lBF = `17.8894` Chr`17` : `27,546,321`	0.022	0.977	0.000
rs997781 lBF = `-0.00491408` Chr`17` : `67,117,688`	0.022	0.978	0.000
rs7221360 lBF = `16.9886` Chr`17` : `52,448,143`	0.021	0.978	0.000
rs118155463 lBF = `21.1268` Chr`17` : `8,079,842`	0.021	0.979	0.000
rs79665456 lBF = `13.4635` Chr`17` : `36,203,084`	0.020	0.980	0.000
rs80301618 lBF = `14.6641` Chr`17` : `70,922,471`	0.019	0.980	0.000
rs74361281 lBF = `11.9464` Chr`17` : `14,629,706`	0.016	0.980	0.003
rs75213074 lBF = `1.24058` Chr`17` : `5,612,640`	0.000	0.981	0.019
rs117964204 lBF = `0.118127` Chr`17` : `48,692,082`	0.018	0.982	0.000
rs79392787 lBF = `0.0415236` Chr`17` : `6,250,054`	0.016	0.983	0.001
rs2597167 lBF = `0.158913` Chr`17` : `46,047,656`	0.000	0.983	0.016
rs12103884 lBF = `14.2192` Chr`17` : `38,045,725`	0.000	0.984	0.016
rs77068175 lBF = `13.8412` Chr`17` : `11,117,116`	0.016	0.984	0.000
rs12150130 lBF = `14.6179` Chr`17` : `14,117,282`	0.015	0.985	0.000
rs186788172 lBF = `0.0152099` Chr`17` : `1,239,189`	0.014	0.986	0.000
rs17780304 lBF = `0.0825355` Chr`17` : `30,535,856`	0.014	0.986	0.000
rs2250422 lBF = `11.7971` Chr`17` : `48,351,018`	0.014	0.986	0.000
rs4789378 lBF = `-0.110129` Chr`17` : `74,930,366`	0.014	0.986	0.000
rs73976923 lBF = `0.0340911` Chr`17` : `6,282,471`	0.012	0.987	0.001
Affx-52331281 lBF = `13.227` Chr`17` : `38,028,633`	0.000	0.987	0.013
rs79969149 lBF = `11.2075` Chr`17` : `26,270,925`	0.012	0.988	0.000
rs2286672 lBF = `0.269317` Chr`17` : `4,712,617`	0.012	0.988	0.000
rs8067912 lBF = `0.79653` Chr`17` : `56,313,904`	0.011	0.988	0.000
rs72839985 lBF = `5.55515` Chr`17` : `56,383,690`	0.012	0.988	0.000
rs8067378 lBF = `13.3376` Chr`17` : `38,051,348`	0.000	0.989	0.011
rs118134255 lBF = `10.2692` Chr`17` : `78,461,019`	0.010	0.989	0.001
rs57157811 lBF = `5.20141` Chr`17` : `80,812,436`	0.010	0.990	0.000
rs17881320 lBF = `0.00087319` Chr`17` : `40,485,239`	0.000	0.990	0.010
rs9303277 lBF = `12.9966` Chr`17` : `37,976,469`	0.000	0.990	0.010
rs113865542 lBF = `9.26168` Chr`17` : `77,176,256`	0.009	0.991	0.000
rs12946510 lBF = `11.0629` Chr`17` : `37,912,377`	0.009	0.991	0.000
rs907092 lBF = `10.6486` Chr`17` : `37,922,259`	0.009	0.991	0.000
rs16966833 lBF = `11.2571` Chr`17` : `30,035,727`	0.008	0.992	0.000
rs34145262 lBF = `0.00758998` Chr`17` : `32,880,882`	0.008	0.992	0.000
rs12950743 lBF = `13.9014` Chr`17` : `38,049,233`	0.000	0.992	0.008
rs7218761 lBF = `0.0300051` Chr`17` : `11,693,587`	0.008	0.992	0.000
rs10445308 lBF = `11.9627` Chr`17` : `37,938,047`	0.008	0.992	0.000
rs149464898 lBF = `0.0111314` Chr`17` : `78,947,333`	0.007	0.992	0.000
rs11658311 lBF = `1.20084` Chr`17` : `17,470,526`	0.007	0.993	0.000
rs12453914 lBF = `0.0421126` Chr`17` : `67,138,878`	0.007	0.993	0.000
rs79446318 lBF = `8.77806` Chr`17` : `74,612,692`	0.003	0.993	0.005
rs1860374 lBF = `6.15678` Chr`17` : `59,277,614`	0.007	0.993	0.000
rs1008977 lBF = `9.74733` Chr`17` : `10,709,674`	0.006	0.994	0.000
rs7224438 lBF = `0.00992166` Chr`17` : `58,966,538`	0.006	0.994	0.000
rs4795397 lBF = `12.2262` Chr`17` : `38,023,745`	0.006	0.994	0.000
rs117898740 lBF = `16.4579` Chr`17` : `78,886,505`	0.005	0.994	0.001
rs10445407 lBF = `-0.083493` Chr`17` : `79,261,809`	0.006	0.994	0.000
rs1663189 lBF = `-0.050365` Chr`17` : `77,889,055`	0.006	0.994	0.000
rs16968377 lBF = `9.38458` Chr`17` : `36,942,396`	0.005	0.995	0.000
rs2305479 lBF = `13.817` Chr`17` : `38,062,217`	0.000	0.995	0.005
rs72634030 lBF = `0.0270474` Chr`17` : `5,272,580`	0.005	0.995	0.000
rs12232497 lBF = `12.0727` Chr`17` : `38,040,119`	0.005	0.995	0.000
rs345166 lBF = `7.71775` Chr`17` : `58,209,589`	0.004	0.996	0.000
rs111926416 lBF = `0.0311968` Chr`17` : `71,943,575`	0.004	0.996	0.000
rs2872507 lBF = `11.9314` Chr`17` : `38,040,763`	0.004	0.996	0.000
rs117843447 lBF = `14.1413` Chr`17` : `20,921,845`	0.004	0.996	0.000
rs17607 lBF = `0.0671434` Chr`17` : `7,484,782`	0.000	0.996	0.004
rs3744064 lBF = `4.44478` Chr`17` : `75,211,208`	0.004	0.996	0.000
rs7501939 lBF = `23.6632` Chr`17` : `36,101,156`	0.000	0.996	0.004
rs2290400 lBF = `13.5198` Chr`17` : `38,066,240`	0.000	0.996	0.004
rs9913352 lBF = `7.55706` Chr`17` : `53,818,042`	0.004	0.996	0.000
rs72883103 lBF = `10.4164` Chr`17` : `74,629,898`	0.002	0.996	0.002
rs71370433 lBF = `1.56699` Chr`17` : `6,197,824`	0.003	0.996	0.000
rs35042707 lBF = `15.0584` Chr`17` : `33,861,639`	0.003	0.997	0.000
rs149969998 lBF = `0.105758` Chr`17` : `13,595,579`	0.003	0.997	0.000
rs8081319 lBF = `0.0106304` Chr`17` : `35,731,081`	0.003	0.997	0.000
rs9303401 lBF = `-0.0139074` Chr`17` : `56,847,945`	0.000	0.997	0.003
rs9896052 lBF = `0.251979` Chr`17` : `73,418,862`	0.003	0.997	0.000
rs143323161 lBF = `0.00353244` Chr`17` : `66,346,556`	0.003	0.997	0.000
rs7224668 lBF = `-0.0447813` Chr`17` : `79,235,788`	0.003	0.997	0.000
rs870829 lBF = `5.15067` Chr`17` : `38,068,382`	0.003	0.997	0.000
rs11078927 lBF = `12.944` Chr`17` : `38,064,405`	0.003	0.997	0.000
rs2305480 lBF = `13.0704` Chr`17` : `38,062,196`	0.003	0.997	0.000
rs8069176 lBF = `13.2041` Chr`17` : `38,057,197`	0.003	0.997	0.000
rs117202297 lBF = `0.153791` Chr`17` : `53,769,035`	0.003	0.997	0.000
rs3760318 lBF = `0.910229` Chr`17` : `29,247,715`	0.000	0.997	0.003
rs3794742 lBF = `-0.0439897` Chr`17` : `76,165,548`	0.000	0.997	0.003
rs7216389 lBF = `14.3028` Chr`17` : `38,069,949`	0.000	0.997	0.003
rs4795399 lBF = `13.6884` Chr`17` : `38,061,439`	0.003	0.997	0.000
rs11078928 lBF = `12.4377` Chr`17` : `38,064,469`	0.002	0.998	0.000
rs3764419 lBF = `0.993552` Chr`17` : `29,164,023`	0.000	0.998	0.002
rs17826255 lBF = `0.0983324` Chr`17` : `29,333,516`	0.000	0.998	0.002
rs180515 lBF = `0.809847` Chr`17` : `58,024,275`	0.002	0.998	0.000
rs17138064 lBF = `-0.0383283` Chr`17` : `35,189,091`	0.002	0.998	0.000
rs78414518 lBF = `7.79778` Chr`17` : `7,478,402`	0.002	0.998	0.001
rs9902235 lBF = `10.873` Chr`17` : `39,383,073`	0.002	0.998	0.000
rs2270518 lBF = `0.00863214` Chr`17` : `7,758,522`	0.001	0.998	0.001
rs34891485 lBF = `9.20547` Chr`17` : `40,263,458`	0.002	0.998	0.000
rs17138899 lBF = `5.85345` Chr`17` : `35,573,686`	0.000	0.998	0.002
rs16956936 lBF = `-0.0329272` Chr`17` : `7,633,692`	0.002	0.998	0.000
rs77697917 lBF = `0.477247` Chr`17` : `41,840,849`	0.002	0.998	0.000
rs10512472 lBF = `0.450556` Chr`17` : `33,884,804`	0.002	0.998	0.000
rs3889237 lBF = `-0.0929532` Chr`17` : `64,779,430`	0.002	0.998	0.000
rs8078051 lBF = `0.00157654` Chr`17` : `72,251,240`	0.001	0.998	0.000
rs12452225 lBF = `2.83101` Chr`17` : `33,266,431`	0.002	0.998	0.000
rs1178422 lBF = `6.83318` Chr`17` : `5,863,924`	0.002	0.998	0.000
rs191241826 lBF = `0.00303601` Chr`17` : `38,953,327`	0.001	0.998	0.000
rs35467001 lBF = `-0.0251195` Chr`17` : `71,380,062`	0.000	0.998	0.002
rs9303280 lBF = `13.2746` Chr`17` : `38,074,031`	0.000	0.998	0.001
rs16971217 lBF = `0.309071` Chr`17` : `33,944,055`	0.001	0.999	0.000
rs2659005 lBF = `-0.0444975` Chr`17` : `79,218,714`	0.000	0.999	0.001
rs3744728 lBF = `0.0269455` Chr`17` : `6,093,951`	0.000	0.999	0.001
Affx-13851073 lBF = `12.5709` Chr`17` : `38,080,865`	0.000	0.999	0.001
rs73989024 lBF = `0.00079784` Chr`17` : `48,009,469`	0.001	0.999	0.000
rs8081264 lBF = `7.94459` Chr`17` : `7,235,316`	0.001	0.999	0.000
rs756766 lBF = `0.0188804` Chr`17` : `26,689,641`	0.001	0.999	0.000
rs2716882 lBF = `-0.0045234` Chr`17` : `5,582,334`	0.000	0.999	0.001
rs147985248 lBF = `11.1689` Chr`17` : `61,615,545`	0.001	0.999	0.000
rs9901675 lBF = `0.192054` Chr`17` : `7,484,812`	0.001	0.999	0.000
rs79045038 lBF = `6.0483` Chr`17` : `66,397,041`	0.001	0.999	0.000
rs10852799 lBF = `10.56` Chr`17` : `11,522,764`	0.001	0.999	0.000
rs117451751 lBF = `9.59278` Chr`17` : `12,809,905`	0.001	0.999	0.000
rs12600635 lBF = `-0.0486726` Chr`17` : `17,142,896`	0.000	0.999	0.001
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rs4148008 lBF = `0.0447219` Chr`17` : `66,875,294`	0.000	1.000	0.000
rs8065772 lBF = `-0.00019853` Chr`17` : `64,842,925`	0.000	1.000	0.000
rs71380849 lBF = `-0.00145541` Chr`17` : `72,975,748`	0.000	1.000	0.000
rs7218361 lBF = `-0.0116146` Chr`17` : `37,725,404`	0.000	1.000	0.000
rs12946942 lBF = `-0.0465206` Chr`17` : `69,236,998`	0.000	1.000	0.000
rs8079702 lBF = `-0.0689908` Chr`17` : `68,190,826`	0.000	1.000	0.000
rs17690703 lBF = `6.48207` Chr`17` : `43,925,297`	0.000	1.000	0.000
rs6503659 lBF = `0.271348` Chr`17` : `39,897,264`	0.000	1.000	0.000
rs9890514 lBF = `0.00366938` Chr`17` : `46,738,883`	0.000	1.000	0.000
rs4273100 lBF = `0.00102974` Chr`17` : `19,153,417`	0.000	1.000	0.000
rs1872085 lBF = `-0.0699987` Chr`17` : `71,528,080`	0.000	1.000	0.000
rs17779747 lBF = `-0.10726` Chr`17` : `68,494,992`	0.000	1.000	0.000
rs62063786 lBF = `8.79618` Chr`17` : `44,061,023`	0.000	1.000	0.000
Affx-13925098 lBF = `7.82839` Chr`17` : `43,789,698`	0.000	1.000	0.000
rs4795406 lBF = `6.87863` Chr`17` : `38,100,134`	0.000	1.000	0.000
rs11867410 lBF = `3.32541` Chr`17` : `64,227,363`	0.000	1.000	0.000
rs7208487 lBF = `1.4986` Chr`17` : `37,543,449`	0.000	1.000	0.000
rs117616209 lBF = `0.590956` Chr`17` : `7,142,851`	0.000	1.000	0.000
rs17183295 lBF = `0.349161` Chr`17` : `31,078,272`	0.000	1.000	0.000
rs57166100 lBF = `0.0869019` Chr`17` : `62,506,280`	0.000	1.000	0.000
rs11654749 lBF = `0.0239748` Chr`17` : `69,125,606`	0.000	1.000	0.000
rs2159292 lBF = `0.0219832` Chr`17` : `11,163,192`	0.000	1.000	0.000
rs4129767 lBF = `-0.0382041` Chr`17` : `76,403,984`	0.000	1.000	0.000
rs1354492 lBF = `-0.0878239` Chr`17` : `31,737,421`	0.000	1.000	0.000
rs2291447 lBF = `-0.113286` Chr`17` : `43,212,963`	0.000	1.000	0.000
Affx-13923818 lBF = `9.15062` Chr`17` : `43,705,601`	0.000	1.000	0.000
rs17689882 lBF = `8.49719` Chr`17` : `43,906,828`	0.000	1.000	0.000
rs2281727 lBF = `2.07378` Chr`17` : `2,117,945`	0.000	1.000	0.000
rs77325336 lBF = `0.351881` Chr`17` : `66,625,794`	0.000	1.000	0.000
rs76525880 lBF = `0.0528143` Chr`17` : `46,614,250`	0.000	1.000	0.000
rs2079742 lBF = `0.0444277` Chr`17` : `59,465,697`	0.000	1.000	0.000
rs11870068 lBF = `0.00034915` Chr`17` : `65,944,515`	0.000	1.000	0.000
rs4990638 lBF = `-0.0214831` Chr`17` : `32,972,729`	0.000	1.000	0.000
rs56176358 lBF = `-0.0224384` Chr`17` : `41,920,653`	0.000	1.000	0.000
rs8077577 lBF = `-0.0325183` Chr`17` : `18,064,730`	0.000	1.000	0.000
rs3027247 lBF = `-0.0497048` Chr`17` : `8,130,867`	0.000	1.000	0.000
rs4789580 lBF = `-0.0584139` Chr`17` : `76,311,991`	0.000	1.000	0.000
rs72925845 lBF = `-0.0643442` Chr`17` : `76,439,361`	0.000	1.000	0.000
rs523516 lBF = `-0.069035` Chr`17` : `37,331,345`	0.000	1.000	0.000
rs2017854 lBF = `-0.103445` Chr`17` : `65,488,021`	0.000	1.000	0.000
rs41282071 lBF = `12.1955` Chr`17` : `73,316,880`	0.000	1.000	0.000
rs9303525 lBF = `9.40295` Chr`17` : `44,187,257`	0.000	1.000	0.000
Affx-13930326 lBF = `8.9538` Chr`17` : `44,106,220`	0.000	1.000	0.000
Affx-13931249 lBF = `8.88038` Chr`17` : `44,157,597`	0.000	1.000	0.000
rs3902025 lBF = `6.12351` Chr`17` : `38,119,254`	0.000	1.000	0.000
rs74618301 lBF = `5.19595` Chr`17` : `52,933,266`	0.000	1.000	0.000
rs1859962 lBF = `4.17106` Chr`17` : `69,108,753`	0.000	1.000	0.000
rs2074404 lBF = `1.63065` Chr`17` : `44,865,439`	0.000	1.000	0.000
rs9906595 lBF = `0.476633` Chr`17` : `37,101,380`	0.000	1.000	0.000
rs72829446 lBF = `0.233276` Chr`17` : `7,552,123`	0.000	1.000	0.000
rs9906289 lBF = `0.0391335` Chr`17` : `46,644,677`	0.000	1.000	0.000
rs906175 lBF = `0.0194719` Chr`17` : `79,173,462`	0.000	1.000	0.000
rs3826538 lBF = `0.00256592` Chr`17` : `1,794,208`	0.000	1.000	0.000
rs9912181 lBF = `-0.00769798` Chr`17` : `39,039,241`	0.000	1.000	0.000
rs8077889 lBF = `-0.0167242` Chr`17` : `41,878,166`	0.000	1.000	0.000
rs8178822 lBF = `-0.0324868` Chr`17` : `64,225,529`	0.000	1.000	0.000
rs8178848 lBF = `-0.0327263` Chr`17` : `64,215,623`	0.000	1.000	0.000
rs11079740 lBF = `-0.0411601` Chr`17` : `44,949,100`	0.000	1.000	0.000
rs28998802 lBF = `-0.0455744` Chr`17` : `26,124,908`	0.000	1.000	0.000
rs11891 lBF = `-0.0494558` Chr`17` : `76,988,785`	0.000	1.000	0.000
rs3027234 lBF = `-0.0637675` Chr`17` : `8,136,092`	0.000	1.000	0.000
rs6504950 lBF = `-0.0717123` Chr`17` : `53,056,471`	0.000	1.000	0.000
rs892961 lBF = `-0.100491` Chr`17` : `75,400,100`	0.000	1.000	0.000
rs10908278 lBF = `30.2505` Chr`17` : `36,099,952`	0.000	1.000	0.000
rs55771008 lBF = `13.6178` Chr`17` : `73,338,557`	0.000	1.000	0.000
Affx-13924388 lBF = `9.2939` Chr`17` : `43,749,454`	0.000	1.000	0.000
rs2942164 lBF = `8.97968` Chr`17` : `43,721,283`	0.000	1.000	0.000
Affx-13931266 lBF = `8.6395` Chr`17` : `44,159,102`	0.000	1.000	0.000
Affx-13926945 lBF = `8.61102` Chr`17` : `43,906,828`	0.000	1.000	0.000
rs7213234 lBF = `7.51298` Chr`17` : `36,980,163`	0.000	1.000	0.000
rs6504218 lBF = `0.518288` Chr`17` : `62,408,299`	0.000	1.000	0.000
rs9910950 lBF = `0.0559154` Chr`17` : `64,131,710`	0.000	1.000	0.000
rs72863877 lBF = `0.0249748` Chr`17` : `68,206,397`	0.000	1.000	0.000
rs17760268 lBF = `0.00781668` Chr`17` : `54,611,291`	0.000	1.000	0.000
rs9899728 lBF = `-0.00597254` Chr`17` : `73,018,774`	0.000	1.000	0.000
rs2613514 lBF = `-0.0225853` Chr`17` : `76,110,518`	0.000	1.000	0.000
rs2672886 lBF = `-0.0283686` Chr`17` : `78,781,651`	0.000	1.000	0.000
rs12453935 lBF = `-0.0882798` Chr`17` : `59,897,455`	0.000	1.000	0.000
rs8064454 lBF = `28.4566` Chr`17` : `36,101,586`	0.000	1.000	0.000
rs2233359 lBF = `23.4181` Chr`17` : `47,286,962`	0.000	1.000	0.000
rs111433752 lBF = `9.69291` Chr`17` : `43,857,989`	0.000	1.000	0.000
Affx-13924269 lBF = `9.06314` Chr`17` : `43,740,856`	0.000	1.000	0.000
Affx-13930370 lBF = `8.99533` Chr`17` : `44,108,100`	0.000	1.000	0.000
rs17649553 lBF = `8.82774` Chr`17` : `43,994,648`	0.000	1.000	0.000
Affx-13931220 lBF = `8.69044` Chr`17` : `44,155,707`	0.000	1.000	0.000
Affx-13930187 lBF = `8.42486` Chr`17` : `44,098,862`	0.000	1.000	0.000
rs8071558 lBF = `4.46114` Chr`17` : `69,107,673`	0.000	1.000	0.000
rs17765344 lBF = `4.44954` Chr`17` : `69,106,874`	0.000	1.000	0.000
rs1509123 lBF = `0.983378` Chr`17` : `6,683,878`	0.000	1.000	0.000
rs2840044 lBF = `0.763699` Chr`17` : `33,892,068`	0.000	1.000	0.000
rs11079830 lBF = `0.58289` Chr`17` : `46,682,630`	0.000	1.000	0.000
rs9906155 lBF = `0.415996` Chr`17` : `75,701,697`	0.000	1.000	0.000
rs2908972 lBF = `0.401177` Chr`17` : `11,407,259`	0.000	1.000	0.000
rs11650494 lBF = `0.304926` Chr`17` : `47,345,186`	0.000	1.000	0.000
rs4789939 lBF = `0.0620522` Chr`17` : `76,881,703`	0.000	1.000	0.000
rs79480822 lBF = `0.049201` Chr`17` : `61,654,225`	0.000	1.000	0.000
rs11077773 lBF = `0.0277197` Chr`17` : `73,060,073`	0.000	1.000	0.000
rs9900808 lBF = `-0.0107269` Chr`17` : `13,062,795`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0333

log Bayes Factor = 38.671

contains 2 variants

0.8177

Cluster X0173

log Bayes Factor = 654.164

contains 9 variants

0.1274

Cluster X0241

log Bayes Factor = 99.1616

contains 6 variants

0.0797

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0291

log Bayes Factor = 303.055

contains 4 variants

0.9999

Cluster X0274

log Bayes Factor = 454.783

contains 18 variants

0.9951

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.9817

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.9335

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.9146

Cluster X0077

log Bayes Factor = 571.533

contains 17 variants

0.9111

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9012

Cluster X0210

log Bayes Factor = 426.159

contains 17 variants

0.8796

Cluster X0153

log Bayes Factor = 328.394

contains 11 variants

0.8537

Cluster X0148

log Bayes Factor = 315.237

contains 11 variants

0.8297

Cluster X0055

log Bayes Factor = 274.911

contains 10 variants

0.7758

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.7060

Cluster X0279

log Bayes Factor = 52.8832

contains 2 variants

0.6842

Cluster X0243

log Bayes Factor = 104.974

contains 6 variants

0.6709

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.6580

Cluster X0110

log Bayes Factor = 721.325

contains 13 variants

0.6173

Cluster X0167

log Bayes Factor = 136.48

contains 6 variants

0.6003

Cluster X0062

log Bayes Factor = 68.7461

contains 4 variants

0.5702

Cluster X0033

log Bayes Factor = 379.444

contains 13 variants

0.5666

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.4655

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.4588

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.4440

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.4302

Cluster X0214

log Bayes Factor = 186.582

contains 8 variants

0.4155

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.3965

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.3368

Cluster X0053

log Bayes Factor = 218.825

contains 12 variants

0.3308

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.3275

Cluster X0197

log Bayes Factor = 158.582

contains 8 variants

0.2900

Cluster X0164

log Bayes Factor = 463.793

contains 16 variants

0.2751

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.2476

Cluster X0324

log Bayes Factor = 32.1341

contains 1 variants

0.2475

Cluster X0229

log Bayes Factor = 347.165

contains 13 variants

0.2397

Cluster X0005

log Bayes Factor = 282.915

contains 11 variants

0.2179

Cluster X0049

log Bayes Factor = 597.061

contains 18 variants

0.2072

Cluster X0088

log Bayes Factor = 243.609

contains 9 variants

0.2057

Cluster X0184

log Bayes Factor = 188.416

contains 8 variants

0.2050

Cluster X0137

log Bayes Factor = 120.748

contains 4 variants

0.1695

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.1631

Cluster X0284

log Bayes Factor = 192.532

contains 9 variants

0.1382

Cluster X0098

log Bayes Factor = 246.226

contains 8 variants

0.1314

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.1302

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.1140

Cluster X0040

log Bayes Factor = 542.747

contains 16 variants

0.0909

Cluster X0126

log Bayes Factor = 384.432

contains 15 variants

0.0774

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.0731

Cluster X0075

log Bayes Factor = 431.344

contains 16 variants

0.0687

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0680

Cluster X0095

log Bayes Factor = 179.348

contains 8 variants

0.0679

Cluster X0315

log Bayes Factor = 42.686

contains 2 variants

0.0633

Cluster X0235

log Bayes Factor = 54.4898

contains 2 variants

0.0630

Cluster X0042

log Bayes Factor = 307.243

contains 12 variants

0.0607

Cluster X0328

log Bayes Factor = 380.087

contains 8 variants

0.0598

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.0580

Cluster X0026

log Bayes Factor = 232.119

contains 9 variants

0.0506

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)