TreeWAS – Cervical intra-epithelial neoplasia (cin) / precancerous cells cervix

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs117207033 lBF = `3.04464` Chr`15` : `97,116,274`	0.609	0.391	0.000
rs3920498 lBF = `9.94753` Chr`1` : `22,492,887`	0.517	0.483	0.000
rs9267119 lBF = `74.6145` Chr`6` : `31,424,585`	0.000	0.528	0.472
rs17475168 lBF = `1.88477` Chr`2` : `65,598,866`	0.471	0.529	0.000
rs35518360 lBF = `10.729` Chr`4` : `103,146,890`	0.462	0.538	0.000
rs75894238 lBF = `2.08969` Chr`6` : `10,128,350`	0.435	0.565	0.000
rs78378222 lBF = `4.16698` Chr`17` : `7,571,752`	0.426	0.574	0.000
rs13135092 lBF = `16.8388` Chr`4` : `103,198,082`	0.421	0.579	0.000
rs13107325 lBF = `16.8696` Chr`4` : `103,188,709`	0.369	0.631	0.000
rs28929474 lBF = `23.0864` Chr`14` : `94,844,947`	0.363	0.637	0.000
rs13107325 lBF = `17.3151` Chr`4` : `103,188,709`	0.353	0.646	0.000
rs76770395 lBF = `1.79092` Chr`5` : `169,499,663`	0.345	0.655	0.000
rs28929474 lBF = `22.7086` Chr`14` : `94,844,947`	0.343	0.657	0.000
rs112635299 lBF = `21.8826` Chr`14` : `94,838,142`	0.341	0.658	0.000
rs74434895 lBF = `7.60443` Chr`1` : `113,934,072`	0.340	0.660	0.000
rs79075617 lBF = `1.89618` Chr`6` : `56,693,272`	0.339	0.661	0.000
rs61819372 lBF = `8.34272` Chr`1` : `114,072,110`	0.337	0.662	0.000
rs9263963 lBF = `46.5991` Chr`6` : `31,186,026`	0.000	0.665	0.335
rs35850753 lBF = `1.92608` Chr`17` : `7,578,671`	0.310	0.690	0.000
rs1794265 lBF = `8.67049` Chr`6` : `32,674,737`	0.301	0.695	0.004
rs116916924 lBF = `3.32967` Chr`11` : `48,269,422`	0.285	0.715	0.000
rs76712070 lBF = `7.71457` Chr`1` : `243,050,615`	0.000	0.727	0.273
rs76602912 lBF = `3.22657` Chr`20` : `57,459,868`	0.272	0.728	0.000
rs79858930 lBF = `1.3229` Chr`10` : `83,047,434`	0.269	0.731	0.000
rs73725220 lBF = `1.04568` Chr`6` : `16,700,060`	0.265	0.735	0.000
rs6890783 lBF = `1.90972` Chr`5` : `172,292,306`	0.257	0.742	0.000
rs11031002 lBF = `4.20566` Chr`11` : `30,215,261`	0.000	0.749	0.251
rs7772131 lBF = `3.65035` Chr`6` : `30,795,171`	0.248	0.752	0.000
rs2853946 lBF = `119.895` Chr`6` : `31,247,203`	0.000	0.753	0.247
rs12294104 lBF = `3.45964` Chr`11` : `30,382,899`	0.000	0.767	0.233
rs1265097 lBF = `47.5933` Chr`6` : `31,106,459`	0.000	0.775	0.225
rs564036233 lBF = `3.63253` Chr`11` : `30,319,008`	0.000	0.781	0.219
rs7521902 lBF = `5.34473` Chr`1` : `22,490,724`	0.216	0.784	0.000
rs76361614 lBF = `1.56054` Chr`2` : `37,527,216`	0.204	0.796	0.000
rs72799290 lBF = `3.62467` Chr`16` : `84,121,289`	0.197	0.803	0.000
rs75891980 lBF = `1.63266` Chr`11` : `93,879,832`	0.188	0.811	0.000
rs115073616 lBF = `0.716089` Chr`2` : `22,668,759`	0.182	0.818	0.000
rs10793273 lBF = `0.630923` Chr`11` : `77,742,595`	0.000	0.819	0.181
rs404860 lBF = `34.8331` Chr`6` : `32,184,345`	0.000	0.819	0.181
rs9263739 lBF = `60.3753` Chr`6` : `31,111,356`	0.000	0.819	0.181
rs11031005 lBF = `4.78995` Chr`11` : `30,226,356`	0.000	0.828	0.171
rs3820282 lBF = `12.2797` Chr`1` : `22,468,215`	0.171	0.829	0.000
rs11031006 lBF = `4.75783` Chr`11` : `30,226,528`	0.000	0.830	0.170
rs17201248 lBF = `18.8353` Chr`6` : `31,803,130`	0.000	0.833	0.166
rs6844473 lBF = `1.27081` Chr`4` : `147,368,219`	0.165	0.835	0.000
rs11134797 lBF = `1.98275` Chr`5` : `172,860,596`	0.163	0.837	0.000
rs3135753 lBF = `1.18304` Chr`10` : `123,280,658`	0.160	0.840	0.000
rs4713226 lBF = `1.9174` Chr`6` : `29,434,414`	0.000	0.843	0.157
rs8753 lBF = `1.19435` Chr`17` : `7,417,640`	0.148	0.851	0.000
rs146125856 lBF = `39.7373` Chr`15` : `50,784,990`	0.000	0.867	0.133
rs2066847 lBF = `9.3263` Chr`16` : `50,763,778`	0.130	0.869	0.000
rs17885382 lBF = `149.13` Chr`6` : `32,552,095`	0.000	0.870	0.130
rs181705462 lBF = `3.24834` Chr`6` : `31,947,027`	0.127	0.873	0.000
rs2523393 lBF = `35.3217` Chr`6` : `29,705,659`	0.000	0.878	0.121
rs9277555 lBF = `90.3087` Chr`6` : `33,055,605`	0.117	0.883	0.000
rs9910950 lBF = `0.98171` Chr`17` : `64,131,710`	0.000	0.887	0.113
rs16871226 lBF = `15.384` Chr`6` : `32,915,851`	0.000	0.890	0.110
rs3814333 lBF = `0.294274` Chr`1` : `184,007,119`	0.109	0.891	0.000
rs9266772 lBF = `70.3592` Chr`6` : `31,352,113`	0.000	0.898	0.102
rs3893464 lBF = `42.8143` Chr`6` : `29,935,250`	0.099	0.901	0.000
rs2523590 lBF = `160.666` Chr`6` : `31,327,064`	0.000	0.901	0.099
rs12201940 lBF = `0.683139` Chr`6` : `5,859,679`	0.097	0.903	0.000
rs7867155 lBF = `0.32376` Chr`9` : `98,827,814`	0.093	0.907	0.000
rs2070600 lBF = `117.998` Chr`6` : `32,151,443`	0.000	0.907	0.093
rs2524079 lBF = `230.012` Chr`6` : `31,242,174`	0.000	0.909	0.091
rs9357121 lBF = `75.3051` Chr`6` : `31,240,479`	0.086	0.910	0.004
rs2281388 lBF = `7.76788` Chr`6` : `33,060,118`	0.000	0.916	0.084
rs78428368 lBF = `0.416822` Chr`4` : `164,617,481`	0.077	0.922	0.000
rs6949729 lBF = `0.796616` Chr`7` : `141,362,431`	0.000	0.924	0.075
rs3117242 lBF = `87.9464` Chr`6` : `33,069,893`	0.075	0.925	0.000
rs9276606 lBF = `218.269` Chr`6` : `32,736,695`	0.071	0.925	0.004
rs116877397 lBF = `1.00264` Chr`12` : `121,162,996`	0.074	0.925	0.000
rs16826658 lBF = `0.866494` Chr`1` : `22,485,871`	0.074	0.926	0.000
rs1150754 lBF = `313.078` Chr`6` : `32,050,758`	0.072	0.926	0.002
rs10176755 lBF = `0.548702` Chr`2` : `171,365,889`	0.073	0.927	0.000
rs7157785 lBF = `0.231938` Chr`14` : `64,235,556`	0.000	0.931	0.069
rs150844304 lBF = `1.85184` Chr`15` : `43,726,625`	0.068	0.932	0.000
rs17101394 lBF = `0.21982` Chr`14` : `64,232,386`	0.000	0.933	0.067
rs11032483 lBF = `2.41352` Chr`11` : `4,515,024`	0.000	0.934	0.065
rs112472535 lBF = `0.315806` Chr`3` : `130,285,880`	0.065	0.935	0.000
rs41268928 lBF = `118.814` Chr`6` : `32,147,157`	0.000	0.938	0.062
rs113524839 lBF = `0.586401` Chr`5` : `84,084,776`	0.000	0.938	0.062
rs2292354 lBF = `0.132168` Chr`12` : `110,368,201`	0.000	0.939	0.061
rs4902243 lBF = `0.193394` Chr`14` : `64,234,243`	0.000	0.939	0.061
rs2523822 lBF = `42.1767` Chr`6` : `29,828,660`	0.000	0.941	0.059
rs4282438 lBF = `12.2637` Chr`6` : `33,072,172`	0.000	0.942	0.058
rs79014439 lBF = `0.422877` Chr`6` : `24,901,861`	0.057	0.943	0.000
rs1265093 lBF = `98.9414` Chr`6` : `31,107,187`	0.000	0.944	0.056
rs2179920 lBF = `85.7725` Chr`6` : `33,058,874`	0.056	0.944	0.000
rs16897515 lBF = `103.483` Chr`6` : `27,278,020`	0.053	0.946	0.000
rs35597309 lBF = `10.975` Chr`6` : `32,589,266`	0.033	0.949	0.019
rs60588302 lBF = `0.168812` Chr`9` : `7,900,777`	0.000	0.949	0.051
rs2235529 lBF = `9.89973` Chr`1` : `22,450,487`	0.050	0.950	0.000
rs2230245 lBF = `0.21517` Chr`19` : `50,909,765`	0.050	0.950	0.000
rs12413578 lBF = `44.9786` Chr`10` : `9,049,253`	0.000	0.951	0.049
rs631288 lBF = `0.343896` Chr`1` : `146,979,516`	0.000	0.952	0.048
rs189757960 lBF = `0.36386` Chr`3` : `100,590,355`	0.046	0.954	0.000
rs2516399 lBF = `23.9353` Chr`6` : `31,481,299`	0.000	0.954	0.046
rs2571391 lBF = `52.4534` Chr`6` : `29,923,838`	0.000	0.955	0.045
rs9268856 lBF = `110.27` Chr`6` : `32,429,719`	0.041	0.955	0.003
rs1178422 lBF = `0.452314` Chr`17` : `5,863,924`	0.043	0.957	0.000
rs73173542 lBF = `0.830828` Chr`5` : `87,810,867`	0.043	0.957	0.000
rs55677935 lBF = `3.17533` Chr`2` : `62,228,013`	0.042	0.958	0.001
rs11752643 lBF = `32.4218` Chr`6` : `32,669,373`	0.000	0.958	0.042
rs3132613 lBF = `27.2147` Chr`6` : `30,537,606`	0.000	0.959	0.041
rs45505795 lBF = `3.91557` Chr`14` : `94,756,943`	0.041	0.959	0.000
rs1050529 lBF = `60.0185` Chr`6` : `31,324,615`	0.000	0.960	0.040
rs74911261 lBF = `8.86044` Chr`11` : `108,357,137`	0.039	0.961	0.000
rs116701331 lBF = `0.816967` Chr`2` : `195,567,306`	0.038	0.961	0.000
rs2164983 lBF = `1.76398` Chr`19` : `8,789,381`	0.038	0.962	0.000
rs4151657 lBF = `148.488` Chr`6` : `31,917,540`	0.011	0.962	0.027
rs2918307 lBF = `1.73853` Chr`19` : `8,789,722`	0.038	0.962	0.000
rs16830359 lBF = `0.312238` Chr`1` : `43,596,384`	0.037	0.962	0.000
rs3869109 lBF = `211.3` Chr`6` : `31,184,196`	0.000	0.963	0.037
rs1042151 lBF = `114.667` Chr`6` : `33,048,661`	0.036	0.964	0.000
rs149693590 lBF = `0.280164` Chr`22` : `31,976,149`	0.036	0.964	0.000
rs56084662 lBF = `0.326795` Chr`13` : `32,869,864`	0.000	0.965	0.035
rs117411365 lBF = `1.83368` Chr`18` : `67,468,303`	0.033	0.966	0.000
rs6693882 lBF = `-0.0269138` Chr`1` : `96,145,968`	0.032	0.968	0.000
rs2826891 lBF = `0.0526349` Chr`21` : `22,910,116`	0.000	0.968	0.032
rs241428 lBF = `3.5704` Chr`6` : `32,804,070`	0.031	0.968	0.000
rs6258 lBF = `0.490626` Chr`17` : `7,534,678`	0.031	0.969	0.000
rs193141495 lBF = `0.227766` Chr`5` : `15,802,238`	0.031	0.969	0.000
rs11970475 lBF = `1.44633` Chr`6` : `29,526,377`	0.031	0.969	0.000
rs41549217 lBF = `4.91359` Chr`6` : `31,323,885`	0.030	0.970	0.000
rs12325192 lBF = `1.03027` Chr`16` : `51,488,129`	0.000	0.970	0.030
rs4418214 lBF = `395.206` Chr`6` : `31,391,401`	0.030	0.970	0.000
rs58721818 lBF = `3.59687` Chr`6` : `138,243,739`	0.000	0.970	0.030
rs17127407 lBF = `0.298138` Chr`14` : `23,647,729`	0.030	0.970	0.000
rs7172689 lBF = `0.530405` Chr`15` : `81,533,695`	0.030	0.970	0.000
rs11175997 lBF = `0.0284168` Chr`12` : `66,401,444`	0.030	0.970	0.000
rs2957128 lBF = `-0.00880226` Chr`18` : `60,060,735`	0.000	0.971	0.029
rs2040406 lBF = `357.929` Chr`6` : `32,603,007`	0.005	0.971	0.024
rs17124955 lBF = `0.224764` Chr`14` : `89,372,751`	0.029	0.971	0.000
rs130067 lBF = `69.0419` Chr`6` : `31,118,511`	0.000	0.972	0.028
rs10982156 lBF = `0.0494367` Chr`9` : `117,088,064`	0.000	0.972	0.028
rs114067101 lBF = `15.4853` Chr`6` : `32,457,960`	0.000	0.973	0.027
rs6927322 lBF = `31.8112` Chr`6` : `31,088,981`	0.000	0.973	0.027
rs184940006 lBF = `0.23848` Chr`13` : `105,078,157`	0.026	0.974	0.000
rs2737229 lBF = `1.13379` Chr`8` : `116,648,565`	0.026	0.974	0.000
rs62106258 lBF = `1.12137` Chr`2` : `417,167`	0.000	0.974	0.026
rs186361153 lBF = `0.264518` Chr`6` : `24,992,362`	0.025	0.974	0.000
rs78516619 lBF = `29.5761` Chr`1` : `168,889,373`	0.025	0.974	0.000
rs41314643 lBF = `0.109102` Chr`1` : `183,255,908`	0.025	0.974	0.000
rs10954650 lBF = `-0.0294324` Chr`7` : `139,326,552`	0.025	0.975	0.000
rs2647012 lBF = `322.395` Chr`6` : `32,664,458`	0.025	0.975	0.000
rs7192 lBF = `287.691` Chr`6` : `32,411,646`	0.002	0.975	0.023
rs17420782 lBF = `0.0449661` Chr`1` : `48,019,222`	0.000	0.975	0.025
rs79335261 lBF = `0.255002` Chr`12` : `56,497,641`	0.000	0.975	0.025
rs117093004 lBF = `0.298163` Chr`13` : `57,119,253`	0.024	0.975	0.000
rs2524163 lBF = `242.456` Chr`6` : `31,259,579`	0.000	0.976	0.024
rs11751190 lBF = `11.4844` Chr`6` : `152,558,197`	0.024	0.976	0.000
rs3131018 lBF = `147.239` Chr`6` : `31,143,582`	0.024	0.976	0.000
rs2227139 lBF = `287.709` Chr`6` : `32,413,459`	0.002	0.976	0.022
rs3853601 lBF = `88.7525` Chr`6` : `31,499,603`	0.000	0.976	0.024
rs11571818 lBF = `0.191835` Chr`13` : `32,968,810`	0.000	0.976	0.024
rs660895 lBF = `344.172` Chr`6` : `32,577,380`	0.021	0.976	0.002
rs4321864 lBF = `273.442` Chr`6` : `32,399,187`	0.021	0.977	0.002
rs293748 lBF = `0.0726365` Chr`5` : `36,900,843`	0.023	0.977	0.000
rs111772174 lBF = `0.277809` Chr`19` : `2,685,808`	0.023	0.977	0.000
rs2476601 lBF = `159.383` Chr`1` : `114,377,568`	0.000	0.977	0.023
rs9268301 lBF = `243.509` Chr`6` : `32,319,637`	0.022	0.977	0.000
rs2476601 lBF = `160.809` Chr`1` : `114,377,568`	0.022	0.978	0.000
rs438475 lBF = `30.1654` Chr`6` : `32,186,245`	0.000	0.978	0.022
rs61894547 lBF = `48.1323` Chr`11` : `76,248,630`	0.021	0.978	0.001
rs6679677 lBF = `158.346` Chr`1` : `114,303,808`	0.022	0.978	0.000
rs2856717 lBF = `323.353` Chr`6` : `32,670,308`	0.022	0.978	0.000
rs17702901 lBF = `0.127785` Chr`15` : `92,930,411`	0.021	0.979	0.000
rs12943679 lBF = `0.114847` Chr`17` : `64,027,553`	0.021	0.979	0.000
rs2647046 lBF = `322.491` Chr`6` : `32,668,336`	0.021	0.979	0.000
rs2858310 lBF = `322.766` Chr`6` : `32,668,323`	0.021	0.979	0.000
rs2524276 lBF = `51.7811` Chr`6` : `31,408,265`	0.000	0.979	0.021
rs299362 lBF = `0.0749051` Chr`5` : `134,321,546`	0.021	0.979	0.000
rs3129890 lBF = `102.814` Chr`6` : `32,414,273`	0.018	0.979	0.003
rs150934526 lBF = `0.108302` Chr`5` : `120,666,323`	0.021	0.979	0.000
rs78126965 lBF = `-0.0402964` Chr`4` : `40,437,727`	0.000	0.979	0.021
rs7758128 lBF = `9.33586` Chr`6` : `32,345,283`	0.000	0.979	0.020
rs3094548 lBF = `83.4685` Chr`6` : `29,355,202`	0.000	0.979	0.021
rs7174989 lBF = `0.0561611` Chr`15` : `33,953,941`	0.000	0.979	0.021
rs34075049 lBF = `93.8526` Chr`6` : `32,554,935`	0.021	0.979	0.000
rs61778046 lBF = `6.96338` Chr`1` : `22,358,789`	0.020	0.979	0.001
rs3115573 lBF = `169.674` Chr`6` : `32,218,843`	0.018	0.980	0.002
rs76264265 lBF = `0.203023` Chr`1` : `37,309,390`	0.020	0.980	0.000
rs17826255 lBF = `0.18362` Chr`17` : `29,333,516`	0.000	0.980	0.020
rs185543003 lBF = `0.510389` Chr`19` : `2,714,170`	0.019	0.980	0.000
rs118155463 lBF = `0.263534` Chr`17` : `8,079,842`	0.019	0.980	0.000
rs6932056 lBF = `3.49787` Chr`6` : `138,242,437`	0.000	0.981	0.019
rs2016266 lBF = `0.697732` Chr`12` : `53,727,955`	0.000	0.981	0.019
rs3217863 lBF = `0.204023` Chr`12` : `4,399,496`	0.000	0.981	0.019
rs2980976 lBF = `-0.0279635` Chr`18` : `60,080,112`	0.000	0.981	0.019
rs7752903 lBF = `3.46366` Chr`6` : `138,227,364`	0.000	0.981	0.019
rs4780141 lBF = `0.044985` Chr`15` : `33,953,090`	0.000	0.981	0.019
rs56198862 lBF = `0.0817297` Chr`1` : `41,172,312`	0.000	0.981	0.019
rs6498142 lBF = `11.3707` Chr`16` : `11,081,249`	0.018	0.982	0.000
rs4746853 lBF = `0.398543` Chr`10` : `64,181,219`	0.018	0.982	0.000
rs7181696 lBF = `0.0408875` Chr`15` : `33,953,908`	0.000	0.982	0.018
rs11571833 lBF = `0.150064` Chr`13` : `32,972,626`	0.000	0.982	0.018
rs9266629 lBF = `75.0533` Chr`6` : `31,346,822`	0.000	0.982	0.018
rs9275698 lBF = `52.9683` Chr`6` : `32,687,973`	0.001	0.982	0.017
rs3933766 lBF = `11.4709` Chr`13` : `20,110,195`	0.000	0.982	0.018
rs2736871 lBF = `0.0131125` Chr`8` : `134,475,077`	0.000	0.982	0.018
rs142609537 lBF = `0.0814225` Chr`15` : `96,218,894`	0.018	0.982	0.000
rs9275524 lBF = `312.083` Chr`6` : `32,675,109`	0.017	0.982	0.000
rs115754869 lBF = `0.121698` Chr`3` : `152,084,816`	0.018	0.982	0.000
rs74911677 lBF = `0.0720645` Chr`12` : `122,015,993`	0.000	0.982	0.017
rs2977993 lBF = `-0.0171145` Chr`9` : `131,608,786`	0.000	0.982	0.018
rs2736428 lBF = `147.346` Chr`6` : `31,843,924`	0.004	0.983	0.013
rs9272105 lBF = `184.365` Chr`6` : `32,599,999`	0.004	0.984	0.012
rs34536443 lBF = `24.7217` Chr`19` : `10,463,118`	0.000	0.984	0.016
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rs34172193 lBF = `0.228085` Chr`6` : `112,451,601`	0.000	0.985	0.015
rs9275596 lBF = `346.151` Chr`6` : `32,681,631`	0.015	0.985	0.000
rs4780144 lBF = `0.0389588` Chr`15` : `33,954,652`	0.000	0.985	0.015
rs12997023 lBF = `-0.016835` Chr`2` : `40,752,982`	0.015	0.985	0.000
rs4952632 lBF = `-0.0148566` Chr`2` : `40,748,005`	0.015	0.985	0.000
rs2517510 lBF = `113.451` Chr`6` : `31,030,122`	0.000	0.985	0.014
rs4273729 lBF = `311.745` Chr`6` : `32,678,597`	0.014	0.985	0.000
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rs8025470 lBF = `0.0243407` Chr`15` : `33,528,268`	0.000	0.986	0.014
rs9275572 lBF = `312.173` Chr`6` : `32,678,999`	0.014	0.986	0.000
rs62184315 lBF = `0.0101301` Chr`2` : `190,771,945`	0.000	0.986	0.014
rs7141336 lBF = `0.128421` Chr`14` : `91,286,228`	0.000	0.986	0.014
rs9257809 lBF = `228.113` Chr`6` : `29,356,331`	0.014	0.986	0.000
rs5743292 lBF = `6.11597` Chr`16` : `50,759,731`	0.013	0.986	0.001
rs73962318 lBF = `0.0987562` Chr`2` : `143,854,934`	0.014	0.986	0.000
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rs2554380 lBF = `1.46488` Chr`15` : `84,315,884`	0.014	0.986	0.000
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rs4437462 lBF = `-0.06522` Chr`6` : `11,310,419`	0.000	0.986	0.014
rs13017846 lBF = `-0.0179107` Chr`2` : `40,757,791`	0.014	0.986	0.000
rs2524054 lBF = `288.48` Chr`6` : `31,252,396`	0.000	0.986	0.013
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rs592229 lBF = `242.714` Chr`6` : `31,930,441`	0.002	0.987	0.012
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rs4838605 lBF = `-0.058639` Chr`10` : `49,699,957`	0.013	0.987	0.000
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rs6904029 lBF = `47.0274` Chr`6` : `29,943,067`	0.000	0.987	0.013
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rs144447022 lBF = `218.803` Chr`6` : `29,244,219`	0.012	0.987	0.000
rs17636747 lBF = `0.52639` Chr`2` : `105,877,870`	0.012	0.987	0.001
rs800586 lBF = `1.87083` Chr`8` : `116,813,905`	0.000	0.987	0.013
rs10027113 lBF = `-0.00603911` Chr`4` : `9,445,873`	0.000	0.988	0.012
rs117593613 lBF = `0.302949` Chr`14` : `88,296,569`	0.012	0.988	0.000
rs77492256 lBF = `0.492559` Chr`2` : `180,294,914`	0.012	0.988	0.000
rs9687653 lBF = `-0.0568938` Chr`5` : `13,747,060`	0.000	0.988	0.012
rs34476088 lBF = `-0.057066` Chr`5` : `13,747,827`	0.000	0.988	0.012
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rs9765543 lBF = `-0.0587084` Chr`5` : `13,748,169`	0.000	0.988	0.012
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rs7775397 lBF = `332.939` Chr`6` : `32,261,252`	0.003	0.988	0.009
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rs17600642 lBF = `0.0580892` Chr`10` : `72,462,994`	0.012	0.988	0.000
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rs6054 lBF = `1.94729` Chr`4` : `155,489,608`	0.011	0.989	0.000
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rs2858884 lBF = `75.146` Chr`6` : `32,700,083`	0.009	0.989	0.002
rs1055569 lBF = `16.2408` Chr`6` : `31,440,082`	0.000	0.989	0.011
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rs9275292 lBF = `171.861` Chr`6` : `32,663,289`	0.011	0.989	0.000
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rs77406754 lBF = `0.0985581` Chr`11` : `60,041,989`	0.000	0.989	0.010
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rs9923856 lBF = `16.2132` Chr`16` : `11,210,415`	0.000	0.989	0.011
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rs9268645 lBF = `254.239` Chr`6` : `32,408,527`	0.007	0.989	0.004
rs2833693 lBF = `-0.0160521` Chr`21` : `33,552,512`	0.010	0.989	0.000
rs9275563 lBF = `261.746` Chr`6` : `32,677,912`	0.007	0.989	0.003
rs7775228 lBF = `74.2867` Chr`6` : `32,658,079`	0.000	0.989	0.010
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rs3077 lBF = `99.0909` Chr`6` : `33,033,022`	0.010	0.990	0.000
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rs3099844 lBF = `324.729` Chr`6` : `31,448,976`	0.009	0.990	0.001
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rs12523822 lBF = `-0.0906526` Chr`6` : `154,954,420`	0.010	0.990	0.000
rs6897741 lBF = `-0.0861522` Chr`5` : `13,749,237`	0.000	0.990	0.010
rs9368699 lBF = `55.2678` Chr`6` : `31,802,541`	0.000	0.990	0.010
rs3751237 lBF = `-0.0141519` Chr`12` : `27,963,507`	0.010	0.990	0.000
rs576523 lBF = `0.121195` Chr`1` : `160,746,076`	0.000	0.990	0.010
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rs1150753 lBF = `329.049` Chr`6` : `32,059,867`	0.005	0.990	0.005
rs140174 lBF = `-0.0748923` Chr`22` : `23,922,983`	0.000	0.990	0.010
rs3131379 lBF = `326.498` Chr`6` : `31,721,033`	0.004	0.990	0.006
rs1150757 lBF = `328.977` Chr`6` : `32,029,205`	0.005	0.990	0.005
rs9275224 lBF = `170.888` Chr`6` : `32,659,878`	0.010	0.990	0.000
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rs4977756 lBF = `51.8678` Chr`9` : `22,068,652`	0.009	0.990	0.000
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rs2100290 lBF = `0.193179` Chr`2` : `79,632,347`	0.007	0.993	0.000
rs7756521 lBF = `213.967` Chr`6` : `30,848,253`	0.000	0.993	0.007
rs4887053 lBF = `-0.121605` Chr`15` : `78,712,699`	0.007	0.993	0.000
rs3763309 lBF = `263.742` Chr`6` : `32,375,973`	0.005	0.993	0.002
rs3765350 lBF = `4.77653` Chr`1` : `22,447,316`	0.007	0.993	0.000
rs78943781 lBF = `-0.00580961` Chr`19` : `32,443,306`	0.007	0.993	0.000
rs41268896 lBF = `166.484` Chr`6` : `32,070,069`	0.007	0.993	0.000
rs2062583 lBF = `-0.18808` Chr`3` : `56,966,246`	0.007	0.993	0.000
rs3763048 lBF = `0.0205541` Chr`5` : `169,461,547`	0.000	0.993	0.007
rs2269426 lBF = `184.514` Chr`6` : `32,076,499`	0.005	0.993	0.002
rs17630235 lBF = `71.1614` Chr`12` : `112,591,686`	0.007	0.993	0.000
rs2015436 lBF = `2.25703` Chr`6` : `28,896,914`	0.007	0.993	0.000
rs34422007 lBF = `0.698828` Chr`17` : `40,248,644`	0.000	0.993	0.007
rs10995190 lBF = `0.40739` Chr`10` : `64,278,682`	0.007	0.993	0.000
rs3130559 lBF = `26.8023` Chr`6` : `31,097,301`	0.000	0.993	0.007
rs1052693 lBF = `215.147` Chr`6` : `30,876,152`	0.000	0.993	0.007
rs115083581 lBF = `0.776479` Chr`1` : `36,376,992`	0.006	0.993	0.000
rs62392365 lBF = `31.6596` Chr`6` : `25,371,369`	0.005	0.993	0.001
rs1741 lBF = `-0.013648` Chr`16` : `15,130,351`	0.007	0.993	0.000
rs876347 lBF = `-0.0576374` Chr`9` : `121,031,029`	0.007	0.993	0.000
rs9299 lBF = `-0.120315` Chr`17` : `46,669,430`	0.000	0.993	0.007
rs929641 lBF = `-0.077966` Chr`2` : `58,792,377`	0.000	0.993	0.007
rs7204436 lBF = `-0.0910206` Chr`16` : `5,283,491`	0.000	0.993	0.007
rs7960010 lBF = `-0.0477396` Chr`12` : `25,081,595`	0.007	0.993	0.000
rs1367117 lBF = `91.3956` Chr`2` : `21,263,900`	0.000	0.993	0.007
rs78912274 lBF = `1.02283` Chr`9` : `11,274,294`	0.000	0.993	0.007
rs3130340 lBF = `67.4906` Chr`6` : `32,244,627`	0.001	0.993	0.006
rs7042864 lBF = `-0.0725917` Chr`9` : `110,872,307`	0.007	0.993	0.000
rs2076529 lBF = `182.712` Chr`6` : `32,363,955`	0.005	0.993	0.002
rs1155848 lBF = `0.116789` Chr`13` : `79,888,476`	0.007	0.993	0.000
rs652888 lBF = `99.1989` Chr`6` : `31,851,234`	0.001	0.993	0.006
rs10484561 lBF = `85.6784` Chr`6` : `32,665,420`	0.000	0.993	0.007
rs242557 lBF = `-0.0239067` Chr`17` : `44,019,712`	0.007	0.993	0.000
rs9268516 lBF = `181.671` Chr`6` : `32,379,489`	0.003	0.993	0.004
rs6995588 lBF = `0.0901814` Chr`8` : `61,003,897`	0.006	0.993	0.000
rs16855418 lBF = `0.0789028` Chr`2` : `147,084,870`	0.000	0.993	0.006
rs2647044 lBF = `356.691` Chr`6` : `32,667,910`	0.001	0.993	0.005
rs3129716 lBF = `356.713` Chr`6` : `32,657,436`	0.001	0.994	0.005
rs1367117 lBF = `91.6613` Chr`2` : `21,263,900`	0.000	0.994	0.006
rs2395163 lBF = `260.122` Chr`6` : `32,387,809`	0.005	0.994	0.001
rs9271858 lBF = `198.991` Chr`6` : `32,595,223`	0.004	0.994	0.003
rs895636 lBF = `-0.123958` Chr`2` : `45,188,353`	0.006	0.994	0.000
rs895470 lBF = `-0.15383` Chr`12` : `118,146,742`	0.000	0.994	0.006
rs1800625 lBF = `145.036` Chr`6` : `32,152,442`	0.004	0.994	0.002
rs17513503 lBF = `19.5888` Chr`5` : `110,146,446`	0.006	0.994	0.000
rs7692395 lBF = `-0.067343` Chr`4` : `183,624,644`	0.006	0.994	0.000
rs894157 lBF = `-0.0873719` Chr`15` : `90,168,108`	0.006	0.994	0.000
rs12251332 lBF = `0.0602989` Chr`10` : `67,966,574`	0.006	0.994	0.000
rs73313995 lBF = `0.0908007` Chr`12` : `33,622,807`	0.006	0.994	0.000
rs6936204 lBF = `217.725` Chr`6` : `32,217,092`	0.005	0.994	0.001
rs7831697 lBF = `0.230899` Chr`8` : `138,136,304`	0.004	0.994	0.003
rs182429428 lBF = `0.0617016` Chr`20` : `11,908,010`	0.006	0.994	0.000
rs2274432 lBF = `-0.0480046` Chr`1` : `184,020,945`	0.006	0.994	0.000
rs77059113 lBF = `3.07065` Chr`2` : `43,672,508`	0.000	0.994	0.006
rs74964132 lBF = `0.115361` Chr`4` : `154,478,742`	0.006	0.994	0.000
rs59440261 lBF = `60.6131` Chr`6` : `31,371,071`	0.000	0.994	0.006
rs57827131 lBF = `0.0786179` Chr`3` : `194,913,030`	0.006	0.994	0.000
rs11681792 lBF = `-0.165134` Chr`2` : `50,184,394`	0.006	0.994	0.000
rs2003880 lBF = `0.910374` Chr`8` : `6,788,102`	0.006	0.994	0.000
rs72659626 lBF = `0.238942` Chr`8` : `72,920,433`	0.006	0.994	0.000
rs74986928 lBF = `0.0522936` Chr`1` : `66,004,665`	0.006	0.994	0.000
rs191603973 lBF = `0.0684295` Chr`7` : `155,101,686`	0.006	0.994	0.000
rs2157719 lBF = `52.8693` Chr`9` : `22,033,366`	0.006	0.994	0.000
rs117557854 lBF = `0.143226` Chr`11` : `100,139,171`	0.006	0.994	0.000
rs3134931 lBF = `35.3338` Chr`6` : `32,190,620`	0.000	0.994	0.005
rs1050631 lBF = `-0.16369` Chr`18` : `33,694,120`	0.000	0.994	0.006
rs736408 lBF = `-0.0609784` Chr`3` : `52,835,354`	0.006	0.994	0.000
rs2076530 lBF = `182.001` Chr`6` : `32,363,816`	0.004	0.994	0.001
rs2018860 lBF = `0.0942821` Chr`15` : `99,258,710`	0.006	0.994	0.000
rs190057637 lBF = `0.0665461` Chr`4` : `60,338,268`	0.006	0.994	0.000
rs2273788 lBF = `0.010271` Chr`9` : `114,348,617`	0.000	0.994	0.006
rs142944815 lBF = `0.0615621` Chr`9` : `8,773,566`	0.006	0.994	0.000
rs11072766 lBF = `-0.138873` Chr`15` : `78,771,546`	0.000	0.994	0.006
rs16989760 lBF = `0.0135863` Chr`22` : `31,951,808`	0.001	0.994	0.005
rs2857009 lBF = `163.475` Chr`6` : `32,019,746`	0.005	0.994	0.000
rs112143646 lBF = `0.309709` Chr`2` : `102,617,045`	0.006	0.994	0.000
rs72952568 lBF = `0.0412645` Chr`6` : `114,493,211`	0.000	0.994	0.005
rs9272143 lBF = `199.033` Chr`6` : `32,600,803`	0.003	0.994	0.002
rs1552224 lBF = `0.0575463` Chr`11` : `72,433,098`	0.000	0.994	0.006
rs2568485 lBF = `-0.139058` Chr`15` : `78,752,114`	0.006	0.994	0.000
rs2656074 lBF = `-0.13932` Chr`15` : `78,741,384`	0.006	0.994	0.000
rs6030712 lBF = `0.224682` Chr`20` : `35,637,398`	0.000	0.994	0.006
rs1430246 lBF = `-0.0299991` Chr`2` : `222,178,867`	0.000	0.994	0.006
rs28602670 lBF = `-0.139598` Chr`15` : `78,768,167`	0.000	0.994	0.006
rs2036529 lBF = `-0.143948` Chr`15` : `78,726,272`	0.006	0.994	0.000
rs987870 lBF = `106.227` Chr`6` : `33,042,880`	0.006	0.994	0.000
rs6953213 lBF = `0.0680434` Chr`7` : `7,313,485`	0.006	0.994	0.000
rs2854275 lBF = `355.122` Chr`6` : `32,628,428`	0.001	0.994	0.004
rs113641325 lBF = `-0.119679` Chr`12` : `79,539,759`	0.000	0.994	0.006
rs10011926 lBF = `-0.166132` Chr`4` : `111,026,927`	0.006	0.994	0.000
rs11133504 lBF = `-0.021652` Chr`4` : `58,380,322`	0.006	0.994	0.000
rs6547115 lBF = `0.00228021` Chr`2` : `77,246,331`	0.000	0.994	0.006
rs7773456 lBF = `-0.1555` Chr`6` : `19,823,238`	0.000	0.994	0.006
rs8033755 lBF = `0.0919339` Chr`15` : `28,381,546`	0.005	0.994	0.000
rs2568483 lBF = `-0.141717` Chr`15` : `78,752,343`	0.005	0.994	0.000
rs11603334 lBF = `0.0560504` Chr`11` : `72,432,985`	0.000	0.994	0.006
rs2656069 lBF = `-0.14112` Chr`15` : `78,745,707`	0.005	0.994	0.000
rs12721025 lBF = `0.448951` Chr`11` : `116,706,047`	0.006	0.994	0.000
rs116520962 lBF = `0.0708096` Chr`19` : `51,398,427`	0.005	0.994	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	Cervical problem
Nested terms	Abnormal smear (cervix)

Diagnostic term associations

Self-Reported Statistics (`SRS`)

Diagnostic term associations

Self-Reported Statistics (SRS)

Self-Reported Statistics (`SRS`)