TreeWAS – [Z36.1] Antenatal screening for raised alphafetoprotein level

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs28392903 lBF = `14.0654` Chr`15` : `26,106,644`	0.779	0.221	0.000
rs118056006 lBF = `8.25296` Chr`15` : `60,087,231`	0.659	0.341	0.000
rs75334015 lBF = `17.4139` Chr`15` : `40,551,636`	0.614	0.386	0.000
rs28414670 lBF = `16.6255` Chr`15` : `96,000,620`	0.610	0.390	0.000
rs77701960 lBF = `10.9141` Chr`15` : `82,075,642`	0.594	0.406	0.000
rs75706966 lBF = `7.51714` Chr`15` : `33,377,057`	0.587	0.412	0.000
rs6576557 lBF = `17.711` Chr`15` : `26,540,811`	0.583	0.417	0.000
rs17269740 lBF = `11.1226` Chr`15` : `59,998,058`	0.572	0.428	0.000
rs117508732 lBF = `10.2984` Chr`15` : `67,824,170`	0.558	0.442	0.000
rs79774432 lBF = `14.4188` Chr`15` : `38,172,034`	0.544	0.456	0.000
rs72655652 lBF = `20.5631` Chr`15` : `92,647,684`	0.512	0.487	0.000
rs75668017 lBF = `16.6332` Chr`15` : `94,960,358`	0.507	0.493	0.000
rs183775327 lBF = `14.3545` Chr`15` : `67,274,514`	0.501	0.499	0.000
rs77457385 lBF = `15.4395` Chr`15` : `69,979,587`	0.491	0.509	0.000
rs691655 lBF = `19.4694` Chr`15` : `50,020,318`	0.489	0.511	0.000
rs117206795 lBF = `31.2014` Chr`15` : `67,270,650`	0.485	0.515	0.000
rs75683534 lBF = `22.4278` Chr`15` : `65,116,390`	0.455	0.545	0.000
rs75660786 lBF = `15.6938` Chr`15` : `96,161,741`	0.451	0.548	0.000
rs117654141 lBF = `19.1486` Chr`15` : `38,120,376`	0.432	0.568	0.000
rs113652541 lBF = `18.6299` Chr`15` : `53,573,692`	0.416	0.583	0.000
rs62012778 lBF = `9.84005` Chr`15` : `63,873,443`	0.405	0.595	0.000
rs12905014 lBF = `3.80001` Chr`15` : `92,883,840`	0.382	0.618	0.000
rs79434560 lBF = `18.5118` Chr`15` : `67,049,150`	0.374	0.626	0.000
rs12901682 lBF = `2.81371` Chr`15` : `78,833,223`	0.371	0.629	0.000
rs117803799 lBF = `13.8032` Chr`15` : `59,431,200`	0.363	0.637	0.000
rs16953998 lBF = `15.2931` Chr`15` : `70,264,186`	0.356	0.644	0.000
rs116448368 lBF = `23.9738` Chr`15` : `52,600,590`	0.343	0.657	0.000
rs74752048 lBF = `15.608` Chr`15` : `50,060,632`	0.340	0.660	0.000
rs192229215 lBF = `1.12807` Chr`15` : `48,048,566`	0.332	0.667	0.000
rs34069323 lBF = `7.33643` Chr`15` : `85,187,245`	0.324	0.676	0.000
rs10851371 lBF = `35.9133` Chr`15` : `39,224,945`	0.310	0.690	0.000
rs149916999 lBF = `5.74278` Chr`15` : `31,408,269`	0.303	0.697	0.000
rs138117236 lBF = `16.8457` Chr`15` : `83,309,422`	0.299	0.701	0.000
Affx-52173688 lBF = `17.4903` Chr`15` : `99,671,741`	0.288	0.711	0.000
rs78425542 lBF = `16.392` Chr`15` : `69,399,885`	0.288	0.711	0.000
rs117599750 lBF = `11.7875` Chr`15` : `40,091,332`	0.287	0.713	0.000
rs17522649 lBF = `26.3622` Chr`15` : `93,084,746`	0.280	0.720	0.000
rs117207033 lBF = `17.1989` Chr`15` : `97,116,274`	0.272	0.728	0.000
rs10520638 lBF = `2.90698` Chr`15` : `87,253,534`	0.266	0.734	0.000
rs117133403 lBF = `17.8134` Chr`15` : `49,823,391`	0.262	0.738	0.000
rs74850597 lBF = `17.1584` Chr`15` : `98,129,804`	0.261	0.739	0.000
rs113223489 lBF = `11.3029` Chr`15` : `64,262,688`	0.248	0.752	0.000
rs17647114 lBF = `1.90052` Chr`15` : `87,436,745`	0.243	0.756	0.000
rs114897391 lBF = `14.311` Chr`15` : `96,065,019`	0.233	0.766	0.000
rs77603112 lBF = `33.2101` Chr`15` : `47,488,446`	0.227	0.773	0.000
rs148060237 lBF = `12.4871` Chr`15` : `72,180,440`	0.226	0.774	0.000
rs78820411 lBF = `24.1897` Chr`15` : `26,478,903`	0.221	0.779	0.000
rs112044143 lBF = `9.4375` Chr`15` : `33,800,749`	0.214	0.786	0.000
rs75905933 lBF = `1.53062` Chr`15` : `31,548,996`	0.195	0.805	0.000
rs2233070 lBF = `23.8275` Chr`15` : `23,889,739`	0.186	0.813	0.001
rs1916149 lBF = `16.6286` Chr`15` : `38,464,431`	0.184	0.816	0.000
rs10162934 lBF = `7.83475` Chr`15` : `35,541,843`	0.178	0.822	0.000
rs12909281 lBF = `12.1942` Chr`15` : `33,345,389`	0.172	0.827	0.000
rs1426654 lBF = `0.663903` Chr`15` : `48,426,484`	0.171	0.828	0.000
rs116299775 lBF = `29.8285` Chr`15` : `91,445,276`	0.171	0.829	0.000
rs117040525 lBF = `29.602` Chr`15` : `36,563,570`	0.158	0.841	0.000
rs74609360 lBF = `1.8041` Chr`15` : `31,540,395`	0.149	0.850	0.000
rs117598275 lBF = `13.4863` Chr`15` : `26,580,611`	0.147	0.852	0.000
rs117458067 lBF = `15.4786` Chr`15` : `61,951,318`	0.138	0.862	0.000
rs72767417 lBF = `6.73352` Chr`15` : `94,813,962`	0.134	0.865	0.001
rs78275630 lBF = `11.943` Chr`15` : `58,202,985`	0.128	0.872	0.000
rs1834640 lBF = `8.70364` Chr`15` : `48,392,165`	0.121	0.879	0.000
rs145013933 lBF = `9.5117` Chr`15` : `33,091,102`	0.119	0.881	0.000
rs28479400 lBF = `4.3492` Chr`15` : `99,995,884`	0.108	0.892	0.000
rs56190744 lBF = `18.1608` Chr`15` : `78,170,282`	0.104	0.896	0.000
rs141308780 lBF = `0.577437` Chr`15` : `84,260,542`	0.100	0.899	0.000
rs72732571 lBF = `15.1337` Chr`15` : `78,424,369`	0.095	0.905	0.000
rs78236847 lBF = `19.6533` Chr`15` : `33,294,717`	0.092	0.908	0.000
rs3934516 lBF = `7.69858` Chr`15` : `61,603,979`	0.086	0.914	0.000
rs12900158 lBF = `1.30405` Chr`15` : `47,879,627`	0.078	0.922	0.000
rs28459338 lBF = `6.27018` Chr`15` : `67,097,927`	0.076	0.924	0.000
rs16966389 lBF = `0.121312` Chr`15` : `38,464,874`	0.074	0.926	0.000
rs117473873 lBF = `9.65269` Chr`15` : `53,024,679`	0.073	0.927	0.000
rs79336250 lBF = `15.5463` Chr`15` : `57,308,475`	0.070	0.930	0.000
rs16977508 lBF = `17.5006` Chr`15` : `57,743,603`	0.065	0.935	0.000
rs117655850 lBF = `10.086` Chr`15` : `87,222,097`	0.064	0.936	0.000
rs80184563 lBF = `6.16302` Chr`15` : `79,151,207`	0.063	0.937	0.000
rs75034815 lBF = `18.297` Chr`15` : `31,315,963`	0.061	0.938	0.000
rs748404 lBF = `0.0377332` Chr`15` : `43,559,231`	0.058	0.942	0.000
rs72744450 lBF = `6.48395` Chr`15` : `66,432,798`	0.056	0.944	0.000
rs187775 lBF = `8.50037` Chr`15` : `58,677,895`	0.053	0.947	0.000
rs4606657 lBF = `14.3358` Chr`15` : `61,601,952`	0.050	0.950	0.000
rs75312808 lBF = `17.1131` Chr`15` : `47,918,724`	0.048	0.952	0.000
rs77145174 lBF = `21.2117` Chr`15` : `57,177,676`	0.046	0.954	0.000
rs74850413 lBF = `11.8512` Chr`15` : `98,258,859`	0.043	0.957	0.000
rs72733851 lBF = `13.422` Chr`15` : `47,804,552`	0.041	0.959	0.000
rs112232665 lBF = `16.6494` Chr`15` : `85,869,137`	0.039	0.960	0.000
rs2965324 lBF = `13.1575` Chr`15` : `48,274,460`	0.039	0.961	0.000
rs1847246 lBF = `13.224` Chr`15` : `82,323,786`	0.038	0.961	0.000
Affx-12152382 lBF = `7.18149` Chr`15` : `89,745,122`	0.038	0.962	0.000
rs76918861 lBF = `18.3265` Chr`15` : `72,847,656`	0.037	0.962	0.001
rs7495132 lBF = `0.355927` Chr`15` : `91,172,901`	0.000	0.964	0.036
rs11633178 lBF = `10.7181` Chr`15` : `78,944,538`	0.033	0.967	0.000
rs539901 lBF = `0.0507584` Chr`15` : `58,674,669`	0.031	0.968	0.000
rs147577476 lBF = `13.9193` Chr`15` : `60,432,921`	0.032	0.968	0.000
rs17238859 lBF = `22.6845` Chr`15` : `56,957,179`	0.030	0.969	0.000
rs587847 lBF = `-0.0314841` Chr`15` : `37,660,049`	0.000	0.969	0.031
rs17565841 lBF = `0.193744` Chr`15` : `27,997,247`	0.000	0.971	0.029
rs72727381 lBF = `15.1333` Chr`15` : `38,823,527`	0.028	0.971	0.001
rs144442299 lBF = `5.60539` Chr`15` : `54,295,192`	0.028	0.971	0.000
rs339978 lBF = `5.5937` Chr`15` : `60,937,402`	0.028	0.972	0.000
rs117486084 lBF = `13.6827` Chr`15` : `27,086,879`	0.028	0.972	0.000
rs2433610 lBF = `0.0435733` Chr`15` : `45,686,091`	0.027	0.972	0.000
rs117932080 lBF = `25.9049` Chr`15` : `93,875,227`	0.026	0.974	0.000
rs4420500 lBF = `10.4486` Chr`15` : `78,962,964`	0.025	0.975	0.000
rs8033755 lBF = `6.27132` Chr`15` : `28,381,546`	0.022	0.977	0.001
rs55786559 lBF = `9.77742` Chr`15` : `85,077,738`	0.000	0.978	0.022
rs11634351 lBF = `10.8007` Chr`15` : `78,944,718`	0.022	0.978	0.000
rs4887077 lBF = `15.5143` Chr`15` : `78,978,364`	0.022	0.978	0.000
rs117231330 lBF = `14.3463` Chr`15` : `81,214,019`	0.021	0.979	0.000
rs2011013 lBF = `0.0987543` Chr`15` : `84,625,766`	0.000	0.979	0.021
rs75367305 lBF = `9.30397` Chr`15` : `74,511,630`	0.021	0.979	0.000
rs12593811 lBF = `5.9761` Chr`15` : `101,721,892`	0.021	0.979	0.000
rs11639372 lBF = `11.9211` Chr`15` : `78,966,655`	0.021	0.979	0.000
rs12901913 lBF = `15.3462` Chr`15` : `78,981,348`	0.020	0.980	0.000
rs8036080 lBF = `3.38637` Chr`15` : `41,196,384`	0.019	0.981	0.000
rs35216196 lBF = `26.0859` Chr`15` : `38,193,234`	0.018	0.981	0.001
rs72763071 lBF = `14.1776` Chr`15` : `101,347,950`	0.018	0.981	0.000
rs11638830 lBF = `10.8043` Chr`15` : `78,948,319`	0.018	0.982	0.000
rs12900968 lBF = `10.5004` Chr`15` : `58,108,764`	0.016	0.982	0.002
rs12899135 lBF = `10.7834` Chr`15` : `78,954,379`	0.018	0.982	0.000
rs922692 lBF = `15.1186` Chr`15` : `78,984,214`	0.018	0.982	0.000
rs11638372 lBF = `15.1961` Chr`15` : `78,983,559`	0.018	0.982	0.000
rs1996371 lBF = `10.4683` Chr`15` : `78,956,806`	0.018	0.982	0.000
rs16942341 lBF = `0.979771` Chr`15` : `89,388,905`	0.017	0.982	0.000
rs72743199 lBF = `13.7888` Chr`15` : `78,975,855`	0.017	0.983	0.000
rs2170311 lBF = `10.7953` Chr`15` : `78,947,611`	0.017	0.983	0.000
rs8039449 lBF = `31.2562` Chr`15` : `78,914,534`	0.017	0.983	0.000
rs11634027 lBF = `15.0934` Chr`15` : `26,637,415`	0.017	0.983	0.000
rs62020330 lBF = `7.2423` Chr`15` : `50,562,847`	0.016	0.983	0.000
rs11072785 lBF = `11.9144` Chr`15` : `78,968,229`	0.015	0.985	0.000
rs1021071 lBF = `11.7` Chr`15` : `78,968,179`	0.015	0.985	0.000
rs6495314 lBF = `11.5014` Chr`15` : `78,960,529`	0.015	0.985	0.000
rs62002515 lBF = `10.786` Chr`15` : `59,296,838`	0.014	0.985	0.000
rs12902602 lBF = `11.8843` Chr`15` : `78,967,401`	0.014	0.986	0.000
rs4886579 lBF = `11.3251` Chr`15` : `78,969,256`	0.014	0.986	0.000
rs55958997 lBF = `29.1415` Chr`15` : `78,915,872`	0.014	0.986	0.000
rs4886580 lBF = `11.1907` Chr`15` : `78,969,385`	0.012	0.988	0.000
rs12910916 lBF = `24.3202` Chr`15` : `47,675,655`	0.012	0.988	0.000
rs2174866 lBF = `0.0143718` Chr`15` : `53,464,220`	0.012	0.988	0.000
rs2869561 lBF = `12.7931` Chr`15` : `79,025,516`	0.011	0.988	0.000
rs3813565 lBF = `13.1694` Chr`15` : `79,019,610`	0.011	0.989	0.000
rs67426328 lBF = `23.1344` Chr`15` : `78,934,318`	0.011	0.989	0.000
rs117267308 lBF = `0.118699` Chr`15` : `63,346,376`	0.010	0.990	0.000
rs138570705 lBF = `3.70168` Chr`15` : `44,266,730`	0.010	0.990	0.000
rs55988292 lBF = `23.2665` Chr`15` : `78,936,168`	0.009	0.991	0.000
rs56117933 lBF = `22.0577` Chr`15` : `78,832,349`	0.009	0.991	0.000
rs4575512 lBF = `12.8191` Chr`15` : `97,941,122`	0.009	0.991	0.000
rs4775078 lBF = `6.96311` Chr`15` : `45,165,400`	0.009	0.991	0.000
rs783540 lBF = `-0.00710796` Chr`15` : `83,254,708`	0.009	0.991	0.000
rs4886583 lBF = `13.0581` Chr`15` : `79,021,445`	0.009	0.991	0.000
rs4886584 lBF = `13.0581` Chr`15` : `79,021,464`	0.009	0.991	0.000
rs4886582 lBF = `13.0576` Chr`15` : `79,021,441`	0.009	0.991	0.000
rs28602670 lBF = `0.0139218` Chr`15` : `78,768,167`	0.008	0.992	0.000
rs2869548 lBF = `30.3012` Chr`15` : `78,922,638`	0.008	0.992	0.000
rs3894347 lBF = `13.1778` Chr`15` : `79,026,001`	0.008	0.992	0.000
rs12908207 lBF = `13.1797` Chr`15` : `79,025,963`	0.008	0.992	0.000
rs2965313 lBF = `14.0878` Chr`15` : `48,241,505`	0.008	0.992	0.000
rs7165170 lBF = `0.326284` Chr`15` : `91,181,489`	0.000	0.992	0.008
rs56390833 lBF = `34.8717` Chr`15` : `78,877,381`	0.008	0.992	0.000
rs10518960 lBF = `17.1635` Chr`15` : `45,334,829`	0.007	0.992	0.001
rs4887084 lBF = `12.8944` Chr`15` : `79,025,593`	0.008	0.992	0.000
rs150844304 lBF = `10.501` Chr`15` : `43,726,625`	0.008	0.992	0.000
rs72743158 lBF = `30.527` Chr`15` : `78,926,445`	0.008	0.992	0.000
rs76919723 lBF = `13.6035` Chr`15` : `79,017,281`	0.008	0.992	0.000
rs8038543 lBF = `13.5425` Chr`15` : `79,017,685`	0.008	0.992	0.000
rs4887083 lBF = `12.6659` Chr`15` : `79,025,577`	0.008	0.992	0.000
rs8027972 lBF = `12.657` Chr`15` : `79,022,615`	0.008	0.992	0.000
rs17487223 lBF = `29.7655` Chr`15` : `78,923,987`	0.007	0.992	0.000
rs35583595 lBF = `13.4432` Chr`15` : `79,020,152`	0.007	0.993	0.000
rs140330585 lBF = `34.1551` Chr`15` : `78,866,445`	0.007	0.993	0.000
rs951266 lBF = `34.0189` Chr`15` : `78,878,541`	0.007	0.993	0.000
rs11072792 lBF = `13.1592` Chr`15` : `78,999,911`	0.007	0.993	0.000
rs80162468 lBF = `13.7456` Chr`15` : `79,026,316`	0.007	0.993	0.000
rs4886585 lBF = `13.7456` Chr`15` : `79,026,315`	0.007	0.993	0.000
rs118036322 lBF = `17.3823` Chr`15` : `54,331,986`	0.007	0.993	0.000
rs55676755 lBF = `35.5939` Chr`15` : `78,898,932`	0.007	0.993	0.000
rs6496667 lBF = `0.258962` Chr`15` : `90,893,668`	0.007	0.993	0.000
rs11858577 lBF = `0.070698` Chr`15` : `67,066,563`	0.007	0.993	0.000
rs11633958 lBF = `33.9624` Chr`15` : `78,862,064`	0.007	0.993	0.000
rs809736 lBF = `-0.0350804` Chr`15` : `61,329,788`	0.000	0.993	0.007
rs138544659 lBF = `35.1469` Chr`15` : `78,900,701`	0.007	0.993	0.000
rs76954458 lBF = `13.8611` Chr`15` : `35,189,409`	0.006	0.993	0.000
rs17486195 lBF = `34.277` Chr`15` : `78,865,197`	0.006	0.993	0.000
rs7172118 lBF = `33.7853` Chr`15` : `78,862,453`	0.006	0.993	0.000
rs75421114 lBF = `9.7401` Chr`15` : `98,217,518`	0.006	0.994	0.000
rs11639049 lBF = `12.6971` Chr`15` : `79,023,730`	0.006	0.994	0.000
rs11639166 lBF = `12.6714` Chr`15` : `79,023,766`	0.006	0.994	0.000
rs7180002 lBF = `32.6488` Chr`15` : `78,873,993`	0.006	0.994	0.000
rs11634543 lBF = `13.7153` Chr`15` : `79,005,504`	0.006	0.994	0.000
rs9788721 lBF = `35.3476` Chr`15` : `78,802,869`	0.006	0.994	0.000
rs4887086 lBF = `12.9948` Chr`15` : `79,026,529`	0.006	0.994	0.000
rs113154706 lBF = `0.0330048` Chr`15` : `97,018,733`	0.000	0.994	0.006
rs147144681 lBF = `35.355` Chr`15` : `78,900,908`	0.006	0.994	0.000
rs8192482 lBF = `35.1524` Chr`15` : `78,886,198`	0.006	0.994	0.000
rs11857532 lBF = `3.34895` Chr`15` : `78,968,268`	0.006	0.994	0.000
rs146009840 lBF = `35.6058` Chr`15` : `78,906,177`	0.005	0.994	0.000
rs4887067 lBF = `35.132` Chr`15` : `78,886,947`	0.005	0.995	0.000
rs1825083 lBF = `13.1604` Chr`15` : `79,023,467`	0.005	0.995	0.000
rs1878186 lBF = `0.0132574` Chr`15` : `48,508,400`	0.000	0.995	0.005
rs11629637 lBF = `13.3124` Chr`15` : `79,019,024`	0.005	0.995	0.000
rs34563625 lBF = `13.2278` Chr`15` : `79,020,278`	0.005	0.995	0.000
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rs76280009 lBF = `6.73436` Chr`15` : `30,228,071`	0.001	0.999	0.000
rs77963519 lBF = `-0.00312014` Chr`15` : `82,193,846`	0.000	0.999	0.001
rs7177026 lBF = `-0.0870655` Chr`15` : `79,927,594`	0.001	0.999	0.000
rs2137111 lBF = `-0.0912515` Chr`15` : `77,851,535`	0.000	0.999	0.001
rs637137 lBF = `17.3142` Chr`15` : `78,873,976`	0.000	0.999	0.001
rs576982 lBF = `17.3069` Chr`15` : `78,870,803`	0.000	0.999	0.001
rs667282 lBF = `17.1517` Chr`15` : `78,863,472`	0.000	0.999	0.001
rs4906759 lBF = `0.00225267` Chr`15` : `25,975,208`	0.000	0.999	0.000
rs2412459 lBF = `-0.0112714` Chr`15` : `40,295,959`	0.000	0.999	0.001
rs493258 lBF = `-0.0963353` Chr`15` : `58,687,880`	0.000	0.999	0.001
rs951985 lBF = `28.7452` Chr`15` : `78,720,923`	0.001	0.999	0.000
rs1394371 lBF = `15.6461` Chr`15` : `78,724,469`	0.001	0.999	0.000
rs11858210 lBF = `12.875` Chr`15` : `79,078,358`	0.001	0.999	0.000
rs11631955 lBF = `12.3799` Chr`15` : `79,085,915`	0.001	0.999	0.000
rs11072806 lBF = `11.8753` Chr`15` : `79,079,074`	0.001	0.999	0.000
rs2118405 lBF = `-0.00674688` Chr`15` : `96,975,868`	0.000	0.999	0.001
rs62013859 lBF = `-0.00985517` Chr`15` : `86,826,840`	0.000	0.999	0.001
rs11072158 lBF = `-0.0701589` Chr`15` : `70,634,709`	0.000	0.999	0.001
rs2904220 lBF = `12.8397` Chr`15` : `79,076,704`	0.001	0.999	0.000
rs1825087 lBF = `12.8373` Chr`15` : `79,077,114`	0.001	0.999	0.000
rs12050525 lBF = `12.7855` Chr`15` : `79,075,746`	0.001	0.999	0.000
rs4775041 lBF = `0.0145541` Chr`15` : `58,674,695`	0.001	0.999	0.000
rs16957709 lBF = `0.00753887` Chr`15` : `43,702,948`	0.000	0.999	0.001
rs17137734 lBF = `0.00358657` Chr`15` : `27,507,773`	0.001	0.999	0.000
rs35853021 lBF = `-0.0482636` Chr`15` : `58,680,643`	0.001	0.999	0.000
rs261291 lBF = `-0.0695615` Chr`15` : `58,680,178`	0.001	0.999	0.000
rs12899147 lBF = `12.9814` Chr`15` : `79,079,512`	0.001	0.999	0.000
rs11639044 lBF = `12.4408` Chr`15` : `79,083,814`	0.001	0.999	0.000
rs2854437 lBF = `-0.042111` Chr`15` : `45,357,410`	0.001	0.999	0.000
rs4886592 lBF = `12.6218` Chr`15` : `79,082,547`	0.001	0.999	0.000
rs2277546 lBF = `12.5381` Chr`15` : `79,083,376`	0.001	0.999	0.000
rs2277545 lBF = `12.5251` Chr`15` : `79,083,591`	0.001	0.999	0.000
rs12903203 lBF = `12.3822` Chr`15` : `79,084,933`	0.001	0.999	0.000
rs28459416 lBF = `7.94577` Chr`15` : `99,561,550`	0.001	0.999	0.000
rs8024939 lBF = `5.37334` Chr`15` : `79,049,237`	0.000	0.999	0.001
rs3924426 lBF = `0.00594985` Chr`15` : `92,445,873`	0.000	0.999	0.000
rs113441626 lBF = `0.00187247` Chr`15` : `72,107,174`	0.000	0.999	0.000
rs113920924 lBF = `0.0008265` Chr`15` : `72,498,937`	0.000	0.999	0.000
rs547843 lBF = `-0.00243888` Chr`15` : `26,424,047`	0.001	0.999	0.000
rs8041943 lBF = `-0.0444366` Chr`15` : `79,966,600`	0.000	0.999	0.001
rs11637630 lBF = `20.2397` Chr`15` : `78,899,719`	0.001	0.999	0.000
rs7183604 lBF = `20.2205` Chr`15` : `78,899,213`	0.001	0.999	0.000
rs569207 lBF = `17.1858` Chr`15` : `78,873,119`	0.000	0.999	0.001
rs7176070 lBF = `16.0891` Chr`15` : `79,033,489`	0.000	0.999	0.001
rs62020698 lBF = `0.450615` Chr`15` : `43,237,414`	0.001	0.999	0.000
rs28420834 lBF = `-0.0406623` Chr`15` : `82,513,121`	0.001	0.999	0.000
rs11072800 lBF = `17.702` Chr`15` : `79,045,857`	0.000	0.999	0.001
rs4468572 lBF = `12.8978` Chr`15` : `79,124,475`	0.000	0.999	0.001
rs28681284 lBF = `12.8174` Chr`15` : `78,908,565`	0.000	0.999	0.001
rs10468092 lBF = `0.321717` Chr`15` : `38,434,891`	0.001	0.999	0.000
rs17819300 lBF = `0.0898622` Chr`15` : `56,210,929`	0.000	0.999	0.001
rs16950081 lBF = `0.0245178` Chr`15` : `66,923,217`	0.001	0.999	0.000
rs4778214 lBF = `-0.0310089` Chr`15` : `28,205,564`	0.000	0.999	0.001
rs1800407 lBF = `5.62045` Chr`15` : `28,230,318`	0.000	0.999	0.000
rs936674 lBF = `0.0308811` Chr`15` : `93,903,597`	0.001	0.999	0.000
rs2238300 lBF = `0.00674349` Chr`15` : `89,851,580`	0.001	0.999	0.000
rs2453533 lBF = `-0.0781824` Chr`15` : `45,641,225`	0.001	0.999	0.000
rs933769 lBF = `-0.0799509` Chr`15` : `96,052,742`	0.000	0.999	0.001
rs4932217 lBF = `-0.105391` Chr`15` : `89,902,032`	0.001	0.999	0.000
rs10519203 lBF = `35.4283` Chr`15` : `78,814,046`	0.001	0.999	0.000
rs1504549 lBF = `23.3155` Chr`15` : `78,766,629`	0.001	0.999	0.000
rs36146269 lBF = `23.2878` Chr`15` : `78,779,510`	0.001	0.999	0.000
rs12593229 lBF = `23.234` Chr`15` : `78,765,290`	0.001	0.999	0.000
rs4299116 lBF = `23.1218` Chr`15` : `78,766,194`	0.001	0.999	0.000
rs13329271 lBF = `19.6438` Chr`15` : `78,914,230`	0.000	0.999	0.001
rs7165042 lBF = `13.4045` Chr`15` : `79,123,338`	0.000	0.999	0.001
rs1601935 lBF = `0.0461629` Chr`15` : `58,671,765`	0.000	0.999	0.001
rs7179575 lBF = `-0.0527773` Chr`15` : `27,323,199`	0.001	0.999	0.000
rs920915 lBF = `-0.0906984` Chr`15` : `58,688,467`	0.001	0.999	0.000
rs1062980 lBF = `21.6264` Chr`15` : `78,792,527`	0.000	0.999	0.001
rs189218934 lBF = `19.6831` Chr`15` : `78,903,987`	0.001	0.999	0.000
rs7171869 lBF = `19.4273` Chr`15` : `78,900,909`	0.001	0.999	0.000
rs8043009 lBF = `18.5049` Chr`15` : `78,908,154`	0.000	0.999	0.001
rs4887113 lBF = `10.8073` Chr`15` : `79,095,287`	0.001	0.999	0.000
rs8192477 lBF = `10.322` Chr`15` : `78,910,463`	0.000	0.999	0.001
rs74249803 lBF = `0.0573818` Chr`15` : `81,705,750`	0.000	0.999	0.000
rs8036030 lBF = `0.021247` Chr`15` : `74,716,609`	0.001	0.999	0.000
rs79604958 lBF = `0.0141016` Chr`15` : `75,929,991`	0.001	0.999	0.000
rs35053544 lBF = `0.0117735` Chr`15` : `46,122,936`	0.000	0.999	0.001
rs74006954 lBF = `0.0027467` Chr`15` : `27,712,644`	0.000	0.999	0.000
rs3893384 lBF = `-0.0741418` Chr`15` : `79,973,055`	0.000	0.999	0.000
rs12910910 lBF = `23.6547` Chr`15` : `78,767,850`	0.001	0.999	0.000
rs8042260 lBF = `23.6429` Chr`15` : `78,774,374`	0.001	0.999	0.000
rs8043227 lBF = `23.5612` Chr`15` : `78,768,871`	0.001	0.999	0.000
rs12916801 lBF = `23.5612` Chr`15` : `78,769,130`	0.001	0.999	0.000
rs12904234 lBF = `23.0302` Chr`15` : `78,779,384`	0.001	0.999	0.000
rs12903295 lBF = `23.0086` Chr`15` : `78,778,972`	0.001	0.999	0.000
rs4887057 lBF = `21.4579` Chr`15` : `78,760,918`	0.000	0.999	0.001
rs6495309 lBF = `19.1798` Chr`15` : `78,915,245`	0.000	0.999	0.001
rs8042374 lBF = `18.7395` Chr`15` : `78,908,032`	0.000	0.999	0.001
rs8042059 lBF = `18.7395` Chr`15` : `78,907,859`	0.000	0.999	0.001
rs7177514 lBF = `18.6876` Chr`15` : `78,907,406`	0.000	0.999	0.001
rs8042494 lBF = `18.6762` Chr`15` : `78,908,010`	0.000	0.999	0.001
rs2219939 lBF = `18.5789` Chr`15` : `79,029,723`	0.001	0.999	0.000
rs4887069 lBF = `17.5813` Chr`15` : `78,909,070`	0.000	0.999	0.001
rs1814880 lBF = `17.4442` Chr`15` : `79,021,140`	0.000	0.999	0.001

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0335

log Bayes Factor = 12.3689

contains 1 variants

0.2094

Cluster X0333

log Bayes Factor = 38.671

contains 2 variants

0.1198

Cluster X0036

log Bayes Factor = 43.2308

contains 4 variants

0.0581

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0052

log Bayes Factor = 654.387

contains 25 variants

0.9319

Cluster X0326

log Bayes Factor = 112.92

contains 5 variants

0.8770

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.8710

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.8709

Cluster X0089

log Bayes Factor = 308.747

contains 13 variants

0.8060

Cluster X0191

log Bayes Factor = 163.555

contains 8 variants

0.8032

Cluster X0030

log Bayes Factor = 216.364

contains 9 variants

0.8031

Cluster X0085

log Bayes Factor = 138.902

contains 6 variants

0.8013

Cluster X0040

log Bayes Factor = 542.747

contains 16 variants

0.7998

Cluster X0277

log Bayes Factor = 726.213

contains 23 variants

0.7998

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.7928

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.7787

Cluster X0238

log Bayes Factor = 97.9307

contains 4 variants

0.7765

Cluster X0102

log Bayes Factor = 99.5678

contains 5 variants

0.7654

Cluster X0264

log Bayes Factor = 205.833

contains 10 variants

0.7537

Cluster X0157

log Bayes Factor = 172.957

contains 8 variants

0.7534

Cluster X0048

log Bayes Factor = 358.819

contains 19 variants

0.7389

Cluster X0315

log Bayes Factor = 42.686

contains 2 variants

0.7333

Cluster X0074

log Bayes Factor = 353.38

contains 15 variants

0.7174

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.7169

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.7167

Cluster X0024

log Bayes Factor = 309.44

contains 13 variants

0.7166

Cluster X0110

log Bayes Factor = 721.325

contains 13 variants

0.7163

Cluster X0155

log Bayes Factor = 348.568

contains 12 variants

0.7161

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.7136

Cluster X0033

log Bayes Factor = 379.444

contains 13 variants

0.7123

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.7103

Cluster X0165

log Bayes Factor = 303.727

contains 12 variants

0.7096

Cluster X0122

log Bayes Factor = 219.114

contains 9 variants

0.7075

Cluster X0218

log Bayes Factor = 425.579

contains 18 variants

0.7050

Cluster X0077

log Bayes Factor = 571.533

contains 17 variants

0.7014

Cluster X0076

log Bayes Factor = 310.928

contains 15 variants

0.7005

Cluster X0214

log Bayes Factor = 186.582

contains 8 variants

0.7003

Cluster X0249

log Bayes Factor = 244.457

contains 11 variants

0.6996

Cluster X0180

log Bayes Factor = 410.88

contains 15 variants

0.6985

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.6973

Cluster X0098

log Bayes Factor = 246.226

contains 8 variants

0.6968

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.6924

Cluster X0234

log Bayes Factor = 28.8983

contains 2 variants

0.6907

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.6903

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.6899

Cluster X0153

log Bayes Factor = 328.394

contains 11 variants

0.6870

Cluster X0053

log Bayes Factor = 218.825

contains 12 variants

0.6861

Cluster X0001

log Bayes Factor = 167.541

contains 7 variants

0.6850

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.6704

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.6692

Cluster X0174

log Bayes Factor = 214.209

contains 8 variants

0.6646

Cluster X0070

log Bayes Factor = 421.182

contains 15 variants

0.6630

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.6605

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.6567

Cluster X0014

log Bayes Factor = 131.677

contains 6 variants

0.6542

Cluster X0150

log Bayes Factor = 861.091

contains 26 variants

0.6527

Cluster X0021

log Bayes Factor = 338.631

contains 13 variants

0.6506

Cluster X0082

log Bayes Factor = 496.905

contains 17 variants

0.6344

Cluster X0088

log Bayes Factor = 243.609

contains 9 variants

0.6339

Cluster X0005

log Bayes Factor = 282.915

contains 11 variants

0.6071

Cluster X0146

log Bayes Factor = 686.343

contains 22 variants

0.6066

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.5983

Cluster X0145

log Bayes Factor = 274.587

contains 11 variants

0.5977

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.5886

Cluster X0081

log Bayes Factor = 278.568

contains 10 variants

0.5766

Cluster X0049

log Bayes Factor = 597.061

contains 18 variants

0.5647

Cluster X0137

log Bayes Factor = 120.748

contains 4 variants

0.5611

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.5459

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.5448

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.5426

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.5349

Cluster X0043

log Bayes Factor = 517.108

contains 20 variants

0.5227

Cluster X0124

log Bayes Factor = 336.468

contains 13 variants

0.5205

Cluster X0164

log Bayes Factor = 463.793

contains 16 variants

0.5185

Cluster X0050

log Bayes Factor = 397.79

contains 16 variants

0.5040

Cluster X0015

log Bayes Factor = 356.23

contains 15 variants

0.4866

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.4837

Cluster X0213

log Bayes Factor = 405.918

contains 15 variants

0.4650

Cluster X0271

log Bayes Factor = 256.743

contains 10 variants

0.4494

Cluster X0261

log Bayes Factor = 420.614

contains 20 variants

0.4383

Cluster X0055

log Bayes Factor = 274.911

contains 10 variants

0.4238

Cluster X0142

log Bayes Factor = 295.63

contains 12 variants

0.4217

Cluster X0276

log Bayes Factor = 187.108

contains 9 variants

0.4131

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.4121

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.4094

Cluster X0210

log Bayes Factor = 426.159

contains 17 variants

0.4056

Cluster X0026

log Bayes Factor = 232.119

contains 9 variants

0.3973

Cluster X0028

log Bayes Factor = 120.445

contains 7 variants

0.3932

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.3915

Cluster X0203

log Bayes Factor = 363.522

contains 11 variants

0.3838

Cluster X0152

log Bayes Factor = 331.156

contains 10 variants

0.3793

Cluster X0029

log Bayes Factor = 709.102

contains 23 variants

0.3519

Cluster X0204

log Bayes Factor = 169.796

contains 8 variants

0.3496

Cluster X0003

log Bayes Factor = 195.6

contains 8 variants

0.3228

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.3227

Cluster X0071

log Bayes Factor = 131.269

contains 6 variants

0.3217

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.3060

Cluster X0134

log Bayes Factor = 151.731

contains 8 variants

0.3048

Cluster X0162

log Bayes Factor = 144.479

contains 9 variants

0.2953

Cluster X0229

log Bayes Factor = 347.165

contains 13 variants

0.2871

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.2775

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.2755

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.2590

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.2532

Cluster X0117

log Bayes Factor = 453.246

contains 21 variants

0.2408

Cluster X0041

log Bayes Factor = 306.192

contains 14 variants

0.2379

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.2376

Cluster X0147

log Bayes Factor = 133.509

contains 9 variants

0.2290

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.2209

Cluster X0018

log Bayes Factor = 430.611

contains 18 variants

0.2138

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.2094

Cluster X0080

log Bayes Factor = 455.123

contains 21 variants

0.2030

Cluster X0267

log Bayes Factor = 92.4806

contains 5 variants

0.2014

Cluster X0195

log Bayes Factor = 167.337

contains 13 variants

0.1954

Cluster X0167

log Bayes Factor = 136.48

contains 6 variants

0.1906

Cluster X0184

log Bayes Factor = 188.416

contains 8 variants

0.1809

Cluster X0220

log Bayes Factor = 142.284

contains 7 variants

0.1775

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.1774

Cluster X0327

log Bayes Factor = 118.248

contains 3 variants

0.1730

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.1687

Cluster X0222

log Bayes Factor = 431.582

contains 17 variants

0.1651

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.1625

Cluster X0166

log Bayes Factor = 230.746

contains 8 variants

0.1611

Cluster X0095

log Bayes Factor = 179.348

contains 8 variants

0.1511

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.1497

Cluster X0259

log Bayes Factor = 246.237

contains 11 variants

0.1383

Cluster X0240

log Bayes Factor = 104.862

contains 6 variants

0.1382

Cluster X0126

log Bayes Factor = 384.432

contains 15 variants

0.1220

Cluster X0075

log Bayes Factor = 431.344

contains 16 variants

0.1151

Cluster X0057

log Bayes Factor = 439.35

contains 16 variants

0.1051

Cluster X0284

log Bayes Factor = 192.532

contains 9 variants

0.1012

Cluster X0230

log Bayes Factor = 131.696

contains 7 variants

0.0852

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.0787

Cluster X0237

log Bayes Factor = 123.902

contains 6 variants

0.0778

Cluster X0148

log Bayes Factor = 315.237

contains 11 variants

0.0694

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0684

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.0643

Cluster X0069

log Bayes Factor = 519.392

contains 20 variants

0.0630

Cluster X0170

log Bayes Factor = 264.081

contains 11 variants

0.0625

Cluster X0078

log Bayes Factor = 203.49

contains 11 variants

0.0603

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.0530

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)