TreeWAS – [N89] Other noninflammatory disorders of vagina

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs76776920 lBF = `13.2686` Chr`13` : `101,763,029`	0.983	0.017	0.000
rs75047119 lBF = `40.63` Chr`13` : `110,888,139`	0.883	0.117	0.000
rs116903209 lBF = `21.5852` Chr`13` : `38,538,467`	0.857	0.143	0.000
rs188448092 lBF = `23.8385` Chr`13` : `24,544,751`	0.839	0.161	0.000
rs80002115 lBF = `18.6774` Chr`13` : `93,812,032`	0.797	0.203	0.000
rs78998565 lBF = `20.664` Chr`13` : `60,121,340`	0.791	0.209	0.000
rs34785368 lBF = `15.6724` Chr`13` : `62,810,930`	0.714	0.286	0.000
rs117173876 lBF = `14.6692` Chr`13` : `38,647,866`	0.685	0.315	0.000
rs9559841 lBF = `15.9157` Chr`13` : `111,191,681`	0.638	0.362	0.000
rs116865068 lBF = `18.8011` Chr`13` : `54,889,350`	0.615	0.385	0.000
rs17885543 lBF = `13.9498` Chr`13` : `96,415,816`	0.608	0.392	0.000
rs35048777 lBF = `13.7061` Chr`13` : `77,288,433`	0.574	0.426	0.000
rs1387718 lBF = `16.5681` Chr`13` : `64,444,995`	0.559	0.441	0.000
rs73180929 lBF = `14.6825` Chr`13` : `44,804,303`	0.547	0.453	0.000
rs74241297 lBF = `35.7526` Chr`13` : `27,525,516`	0.540	0.460	0.000
rs114280567 lBF = `5.46027` Chr`13` : `45,475,582`	0.535	0.464	0.000
rs9589866 lBF = `1.81883` Chr`13` : `87,675,072`	0.525	0.475	0.000
rs61952371 lBF = `11.1184` Chr`13` : `20,588,537`	0.520	0.479	0.000
rs78333854 lBF = `12.5594` Chr`13` : `38,718,163`	0.520	0.480	0.000
rs117777096 lBF = `23.9824` Chr`13` : `50,626,599`	0.511	0.489	0.000
rs61963335 lBF = `28.93` Chr`13` : `110,910,173`	0.504	0.496	0.000
rs9514526 lBF = `7.57978` Chr`13` : `106,937,337`	0.470	0.530	0.000
rs16967767 lBF = `16.5612` Chr`13` : `106,606,772`	0.450	0.550	0.000
rs41284792 lBF = `16.3214` Chr`13` : `50,118,998`	0.432	0.568	0.000
rs77760113 lBF = `23.76` Chr`13` : `60,787,066`	0.420	0.580	0.000
rs76822006 lBF = `39.2942` Chr`13` : `50,922,728`	0.420	0.580	0.000
rs76400623 lBF = `21.2518` Chr`13` : `60,590,751`	0.401	0.599	0.000
rs149773673 lBF = `6.57833` Chr`13` : `104,749,836`	0.378	0.621	0.000
rs77282176 lBF = `20.0294` Chr`13` : `85,917,626`	0.361	0.639	0.000
rs117181604 lBF = `12.3739` Chr`13` : `21,797,762`	0.313	0.687	0.000
rs76884878 lBF = `35.0894` Chr`13` : `50,348,776`	0.285	0.715	0.000
rs116932083 lBF = `29.7503` Chr`13` : `32,983,087`	0.277	0.723	0.000
rs117703456 lBF = `19.1338` Chr`13` : `43,083,754`	0.272	0.728	0.000
rs117577249 lBF = `14.6302` Chr`13` : `56,911,130`	0.232	0.768	0.000
rs12430077 lBF = `9.50458` Chr`13` : `52,609,208`	0.216	0.784	0.000
rs17064002 lBF = `3.11882` Chr`13` : `43,570,801`	0.214	0.785	0.000
rs78275090 lBF = `15.0637` Chr`13` : `56,770,414`	0.182	0.817	0.000
rs117556572 lBF = `18.3262` Chr`13` : `105,088,917`	0.181	0.819	0.000
rs17070605 lBF = `12.7804` Chr`13` : `22,270,139`	0.157	0.843	0.000
rs1323612 lBF = `0.12918` Chr`13` : `43,291,289`	0.000	0.845	0.155
rs16965962 lBF = `0.137252` Chr`13` : `105,807,023`	0.154	0.846	0.000
rs9564188 lBF = `15.2254` Chr`13` : `34,814,354`	0.151	0.849	0.000
rs72657275 lBF = `12.6574` Chr`13` : `108,476,015`	0.143	0.856	0.000
rs118101200 lBF = `24.1388` Chr`13` : `60,119,682`	0.141	0.859	0.000
rs73201983 lBF = `17.0806` Chr`13` : `69,140,110`	0.133	0.867	0.000
rs1296249 lBF = `16.014` Chr`13` : `112,998,648`	0.130	0.870	0.000
rs494558 lBF = `2.91881` Chr`13` : `110,929,162`	0.129	0.870	0.001
rs150813880 lBF = `2.86116` Chr`13` : `109,793,177`	0.092	0.908	0.000
rs1327965 lBF = `6.04177` Chr`13` : `36,271,631`	0.082	0.918	0.000
rs72661820 lBF = `16.7411` Chr`13` : `112,504,318`	0.077	0.923	0.000
rs116855232 lBF = `0.102774` Chr`13` : `48,619,855`	0.071	0.928	0.000
rs75207346 lBF = `11.4709` Chr`13` : `39,925,227`	0.068	0.932	0.000
rs117867136 lBF = `13.2639` Chr`13` : `68,500,982`	0.065	0.935	0.000
rs73200297 lBF = `14.0698` Chr`13` : `69,117,682`	0.063	0.936	0.001
rs4770049 lBF = `0.117272` Chr`13` : `21,093,604`	0.000	0.946	0.053
rs17065323 lBF = `8.06558` Chr`13` : `44,627,788`	0.052	0.948	0.000
rs17232348 lBF = `13.5059` Chr`13` : `38,925,192`	0.050	0.950	0.000
rs76617118 lBF = `2.70881` Chr`13` : `74,567,711`	0.050	0.950	0.000
rs3933766 lBF = `120.737` Chr`13` : `20,110,195`	0.000	0.953	0.047
rs61956285 lBF = `0.0642539` Chr`13` : `71,871,526`	0.046	0.954	0.000
rs117116392 lBF = `15.9603` Chr`13` : `36,649,606`	0.041	0.959	0.000
rs148517668 lBF = `16.9991` Chr`13` : `81,571,364`	0.038	0.962	0.000
rs6563739 lBF = `0.0802017` Chr`13` : `40,239,785`	0.035	0.965	0.000
rs117029977 lBF = `13.3216` Chr`13` : `35,438,988`	0.029	0.971	0.000
rs7993214 lBF = `1.09418` Chr`13` : `40,350,912`	0.026	0.974	0.000
rs11841026 lBF = `12.9537` Chr`13` : `21,013,176`	0.026	0.974	0.000
rs118118056 lBF = `20.4965` Chr`13` : `24,338,125`	0.024	0.975	0.000
rs34394770 lBF = `0.964353` Chr`13` : `40,333,369`	0.000	0.977	0.023
rs16954776 lBF = `0.292858` Chr`13` : `98,700,617`	0.023	0.977	0.000
rs9603612 lBF = `1.25009` Chr`13` : `40,334,852`	0.000	0.977	0.023
rs76761043 lBF = `33.5262` Chr`13` : `40,263,143`	0.022	0.978	0.000
rs73582359 lBF = `18.0266` Chr`13` : `104,556,680`	0.022	0.978	0.000
rs185603859 lBF = `1.417` Chr`13` : `64,048,489`	0.020	0.979	0.000
rs16950650 lBF = `0.313673` Chr`13` : `95,775,432`	0.020	0.980	0.000
rs78553789 lBF = `0.0338594` Chr`13` : `109,556,519`	0.019	0.981	0.000
rs11069738 lBF = `14.2211` Chr`13` : `109,114,226`	0.019	0.981	0.000
rs9603616 lBF = `1.47804` Chr`13` : `40,368,069`	0.000	0.982	0.018
rs6492255 lBF = `6.1559` Chr`13` : `110,953,717`	0.011	0.988	0.001
rs6490525 lBF = `0.00813709` Chr`13` : `20,736,216`	0.011	0.989	0.000
rs7329174 lBF = `0.0168112` Chr`13` : `41,558,110`	0.010	0.989	0.000
rs75084112 lBF = `14.3283` Chr`13` : `79,854,557`	0.010	0.989	0.000
rs9526114 lBF = `0.0297745` Chr`13` : `46,408,037`	0.000	0.991	0.009
rs36071623 lBF = `9.38139` Chr`13` : `88,970,555`	0.008	0.992	0.000
rs79649944 lBF = `10.1687` Chr`13` : `73,131,228`	0.008	0.992	0.000
rs544434 lBF = `0.00814809` Chr`13` : `102,849,265`	0.008	0.992	0.000
rs797495 lBF = `14.4835` Chr`13` : `51,269,796`	0.001	0.992	0.007
rs9552911 lBF = `0.00987537` Chr`13` : `23,864,657`	0.007	0.992	0.000
Affx-9433323 lBF = `14.4442` Chr`13` : `49,094,863`	0.007	0.993	0.000
rs12873154 lBF = `5.39657` Chr`13` : `110,920,852`	0.007	0.993	0.000
rs352236 lBF = `0.00621898` Chr`13` : `70,023,685`	0.007	0.993	0.000
rs12867435 lBF = `19.0079` Chr`13` : `76,828,392`	0.007	0.993	0.000
rs41281112 lBF = `6.88296` Chr`13` : `100,518,634`	0.007	0.993	0.000
rs79340079 lBF = `0.00715483` Chr`13` : `63,507,482`	0.006	0.993	0.000
rs73172251 lBF = `13.5215` Chr`13` : `42,956,384`	0.006	0.993	0.000
rs117093004 lBF = `2.80417` Chr`13` : `57,119,253`	0.006	0.994	0.000
rs80208670 lBF = `0.220763` Chr`13` : `84,438,088`	0.000	0.994	0.006
rs803788 lBF = `17.6946` Chr`13` : `71,617,925`	0.006	0.994	0.000
rs9531710 lBF = `11.0604` Chr`13` : `85,686,069`	0.006	0.994	0.000
rs3922435 lBF = `0.977727` Chr`13` : `31,314,680`	0.000	0.994	0.005
rs2593525 lBF = `0.00392329` Chr`13` : `69,919,399`	0.005	0.995	0.000
rs73195295 lBF = `14.6178` Chr`13` : `58,551,273`	0.005	0.995	0.000
rs17394246 lBF = `22.6201` Chr`13` : `25,208,811`	0.005	0.995	0.000
rs79709413 lBF = `0.0165564` Chr`13` : `25,314,626`	0.000	0.996	0.004
rs11571818 lBF = `8.93415` Chr`13` : `32,968,810`	0.004	0.996	0.000
rs2388082 lBF = `0.00830126` Chr`13` : `29,961,332`	0.004	0.996	0.000
rs79113544 lBF = `14.4413` Chr`13` : `47,580,175`	0.004	0.996	0.000
rs139612726 lBF = `-0.00202091` Chr`13` : `71,357,990`	0.003	0.997	0.000
rs55777179 lBF = `16.0259` Chr`13` : `105,764,807`	0.003	0.997	0.000
rs77868089 lBF = `15.3181` Chr`13` : `40,396,137`	0.003	0.997	0.000
rs184488877 lBF = `0.00181853` Chr`13` : `95,388,117`	0.003	0.997	0.000
rs73155954 lBF = `14.0489` Chr`13` : `26,542,052`	0.003	0.997	0.000
rs7328278 lBF = `0.0487745` Chr`13` : `36,351,766`	0.000	0.997	0.003
rs184940006 lBF = `0.00276156` Chr`13` : `105,078,157`	0.003	0.997	0.000
rs75128130 lBF = `11.4347` Chr`13` : `33,783,123`	0.003	0.997	0.000
rs9315702 lBF = `-0.100282` Chr`13` : `40,118,068`	0.003	0.997	0.000
rs11571833 lBF = `9.84025` Chr`13` : `32,972,626`	0.003	0.997	0.000
rs79663105 lBF = `7.3296` Chr`13` : `115,004,203`	0.002	0.998	0.000
rs75193007 lBF = `15.0928` Chr`13` : `109,470,040`	0.002	0.998	0.000
rs12875271 lBF = `6.70558` Chr`13` : `110,792,743`	0.002	0.998	0.000
rs28667337 lBF = `14.7115` Chr`13` : `98,218,984`	0.002	0.998	0.000
rs117811601 lBF = `12.5145` Chr`13` : `109,010,696`	0.002	0.998	0.000
rs116908681 lBF = `20.2384` Chr`13` : `32,472,367`	0.002	0.998	0.000
rs2997105 lBF = `0.00578687` Chr`13` : `56,378,424`	0.002	0.998	0.000
rs9319064 lBF = `0.00144693` Chr`13` : `85,251,712`	0.002	0.998	0.000
rs79583112 lBF = `18.1593` Chr`13` : `100,571,075`	0.001	0.998	0.000
rs7323893 lBF = `0.00084202` Chr`13` : `88,704,706`	0.002	0.998	0.000
rs9549345 lBF = `11.7981` Chr`13` : `113,718,812`	0.000	0.998	0.002
rs1530530 lBF = `-0.0362524` Chr`13` : `25,247,286`	0.002	0.998	0.000
rs9596863 lBF = `-0.00138453` Chr`13` : `54,434,647`	0.002	0.998	0.000
rs1777672 lBF = `0.00295912` Chr`13` : `36,177,819`	0.001	0.998	0.001
rs116869561 lBF = `11.863` Chr`13` : `91,230,333`	0.001	0.999	0.000
rs114419204 lBF = `14.4286` Chr`13` : `95,041,266`	0.001	0.999	0.000
rs185694 lBF = `-0.071821` Chr`13` : `30,885,223`	0.000	0.999	0.001
rs80289820 lBF = `14.63` Chr`13` : `36,476,290`	0.001	0.999	0.000
rs72636144 lBF = `14.7509` Chr`13` : `89,128,017`	0.001	0.999	0.000
rs189465671 lBF = `0.0435861` Chr`13` : `81,536,365`	0.001	0.999	0.000
rs1370053 lBF = `0.00250351` Chr`13` : `58,514,665`	0.001	0.999	0.000
rs490049 lBF = `0.00106161` Chr`13` : `33,564,863`	0.000	0.999	0.001
rs41433250 lBF = `0.00057372` Chr`13` : `31,495,835`	0.001	0.999	0.000
rs78018806 lBF = `19.3765` Chr`13` : `103,238,877`	0.000	0.999	0.001
rs7985891 lBF = `5.716` Chr`13` : `93,879,031`	0.001	0.999	0.000
rs12863935 lBF = `20.8798` Chr`13` : `23,971,938`	0.001	0.999	0.000
rs78530398 lBF = `15.7707` Chr`13` : `32,365,235`	0.001	0.999	0.000
rs17252438 lBF = `-0.0295593` Chr`13` : `67,560,612`	0.001	0.999	0.000
rs1239954 lBF = `0.0002883` Chr`13` : `51,119,137`	0.001	0.999	0.000
rs627871 lBF = `-0.00007697` Chr`13` : `34,906,055`	0.001	0.999	0.000
rs191275341 lBF = `0.00047124` Chr`13` : `95,067,121`	0.001	0.999	0.000
rs146346907 lBF = `0.00013263` Chr`13` : `109,033,271`	0.001	0.999	0.000
rs148342344 lBF = `0.00005062` Chr`13` : `68,263,279`	0.001	0.999	0.000
rs11843309 lBF = `0.00003701` Chr`13` : `70,454,960`	0.001	0.999	0.000
rs641862 lBF = `0.00003313` Chr`13` : `110,790,232`	0.001	0.999	0.000
rs141008343 lBF = `0.00000448` Chr`13` : `68,309,045`	0.001	0.999	0.000
rs1278769 lBF = `0` Chr`13` : `113,536,627`	0.001	0.999	0.001
rs3812831 lBF = `0` Chr`13` : `114,900,150`	0.001	0.999	0.001
rs186967887 lBF = `0` Chr`13` : `71,249,529`	0.001	0.999	0.001
rs7336690 lBF = `0` Chr`13` : `112,075,344`	0.001	0.999	0.001
rs488703 lBF = `0` Chr`13` : `113,770,876`	0.001	0.999	0.001
rs9324268 lBF = `0` Chr`13` : `112,836,655`	0.001	0.999	0.001
rs7140110 lBF = `0` Chr`13` : `114,544,024`	0.001	0.999	0.001
rs555212 lBF = `0` Chr`13` : `113,756,540`	0.001	0.999	0.001
rs187785117 lBF = `0` Chr`13` : `49,149,871`	0.001	0.999	0.001
rs182426545 lBF = `0` Chr`13` : `64,093,345`	0.001	0.999	0.001
rs9577381 lBF = `0` Chr`13` : `112,575,604`	0.001	0.999	0.001
rs9604153 lBF = `0` Chr`13` : `114,214,125`	0.001	0.999	0.001
rs1012053 lBF = `0` Chr`13` : `42,653,437`	0.001	0.999	0.001
rs141318698 lBF = `0` Chr`13` : `68,234,959`	0.001	0.999	0.001
rs10665 lBF = `0` Chr`13` : `113,752,831`	0.001	0.999	0.001
rs9522267 lBF = `0` Chr`13` : `112,196,367`	0.001	0.999	0.001
rs146168866 lBF = `0` Chr`13` : `113,966,989`	0.001	0.999	0.001
rs11838918 lBF = `0` Chr`13` : `79,410,574`	0.001	0.999	0.001
rs4907479 lBF = `0` Chr`13` : `113,659,108`	0.001	0.999	0.001
rs148788110 lBF = `0` Chr`13` : `68,366,201`	0.001	0.999	0.001
rs9555810 lBF = `0` Chr`13` : `112,181,437`	0.001	0.999	0.001
rs6041 lBF = `0` Chr`13` : `113,772,707`	0.001	0.999	0.001
rs9577729 lBF = `0` Chr`13` : `113,020,757`	0.001	0.999	0.001
rs9604529 lBF = `0` Chr`13` : `114,622,597`	0.001	0.999	0.001
rs141455065 lBF = `0` Chr`13` : `68,285,492`	0.001	0.999	0.001
rs138128600 lBF = `0` Chr`13` : `73,764,625`	0.001	0.999	0.001
rs190312121 lBF = `0` Chr`13` : `19,731,544`	0.001	0.999	0.001
rs561241 lBF = `0` Chr`13` : `113,760,034`	0.001	0.999	0.001
rs944899 lBF = `0` Chr`13` : `112,750,961`	0.001	0.999	0.001
rs9329350 lBF = `0` Chr`13` : `114,507,239`	0.001	0.999	0.001
rs2181540 lBF = `0` Chr`13` : `113,753,164`	0.001	0.999	0.001
rs9533095 lBF = `0` Chr`13` : `42,969,049`	0.001	0.999	0.001
rs185837131 lBF = `0` Chr`13` : `49,029,604`	0.001	0.999	0.001
rs1340490 lBF = `0` Chr`13` : `64,064,588`	0.001	0.999	0.001
rs7333181 lBF = `0` Chr`13` : `112,221,297`	0.001	0.999	0.001
rs7317038 lBF = `0` Chr`13` : `114,012,898`	0.001	0.999	0.001
rs6561030 lBF = `0` Chr`13` : `42,631,719`	0.001	0.999	0.001
rs7996217 lBF = `0` Chr`13` : `102,000,945`	0.001	0.999	0.001
rs11842874 lBF = `0` Chr`13` : `113,694,509`	0.001	0.999	0.001
rs78319313 lBF = `0` Chr`13` : `71,595,310`	0.001	0.999	0.001
rs150369165 lBF = `0` Chr`13` : `82,969,480`	0.001	0.999	0.001
rs9560113 lBF = `0` Chr`13` : `112,183,348`	0.001	0.999	0.001
rs3211770 lBF = `0` Chr`13` : `113,793,849`	0.001	0.999	0.001
rs16966085 lBF = `5.66056` Chr`13` : `105,835,170`	0.001	0.999	0.000
rs138607199 lBF = `-0.0000045` Chr`13` : `68,268,012`	0.001	0.999	0.000
rs17081231 lBF = `1.56724` Chr`13` : `66,967,622`	0.001	0.999	0.000
rs16962638 lBF = `-0.00032597` Chr`13` : `104,186,919`	0.001	0.999	0.000
rs9527419 lBF = `0.191673` Chr`13` : `56,159,009`	0.001	0.999	0.000
rs563538 lBF = `-0.00887784` Chr`13` : `37,433,721`	0.000	0.999	0.001
rs181987887 lBF = `-0.00474037` Chr`13` : `77,246,519`	0.001	0.999	0.000
rs10507380 lBF = `-0.030208` Chr`13` : `27,879,526`	0.000	0.999	0.001
rs7989332 lBF = `-0.0789607` Chr`13` : `21,050,575`	0.001	0.999	0.000
rs9315762 lBF = `0.100513` Chr`13` : `40,741,907`	0.000	0.999	0.001
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rs117091075 lBF = `6.45647` Chr`13` : `83,643,550`	0.000	1.000	0.000
rs12585310 lBF = `0.545178` Chr`13` : `27,528,347`	0.000	1.000	0.000
rs4773330 lBF = `0.369987` Chr`13` : `111,818,832`	0.000	1.000	0.000
rs9584669 lBF = `0.111773` Chr`13` : `98,363,482`	0.000	1.000	0.000
rs17393344 lBF = `0.111217` Chr`13` : `109,473,946`	0.000	1.000	0.000
rs1475622 lBF = `0.0692125` Chr`13` : `82,716,163`	0.000	1.000	0.000
rs9557321 lBF = `0.0184571` Chr`13` : `100,521,101`	0.000	1.000	0.000
rs7318913 lBF = `0.00292219` Chr`13` : `68,572,037`	0.000	1.000	0.000
rs7324021 lBF = `-0.00440337` Chr`13` : `20,637,140`	0.000	1.000	0.000
rs35822625 lBF = `-0.0119424` Chr`13` : `36,714,369`	0.000	1.000	0.000
rs912969 lBF = `-0.0148671` Chr`13` : `103,867,104`	0.000	1.000	0.000
rs1239947 lBF = `-0.0197112` Chr`13` : `51,106,555`	0.000	1.000	0.000
rs9646096 lBF = `-0.0201529` Chr`13` : `38,065,446`	0.000	1.000	0.000
rs17594362 lBF = `-0.0211249` Chr`13` : `42,139,245`	0.000	1.000	0.000
rs140979249 lBF = `-0.0221127` Chr`13` : `36,603,961`	0.000	1.000	0.000
rs1161463 lBF = `-0.0261927` Chr`13` : `29,431,338`	0.000	1.000	0.000
rs9513627 lBF = `-0.0264286` Chr`13` : `100,196,952`	0.000	1.000	0.000
rs990324 lBF = `-0.030626` Chr`13` : `33,387,246`	0.000	1.000	0.000
rs6563695 lBF = `-0.0430247` Chr`13` : `39,903,243`	0.000	1.000	0.000
rs9535307 lBF = `-0.0456365` Chr`13` : `50,291,842`	0.000	1.000	0.000
rs2762051 lBF = `-0.0685734` Chr`13` : `50,835,715`	0.000	1.000	0.000
rs347412 lBF = `-0.0758012` Chr`13` : `42,786,680`	0.000	1.000	0.000
rs9520326 lBF = `-0.0860673` Chr`13` : `107,865,442`	0.000	1.000	0.000
rs3125719 lBF = `-0.0868272` Chr`13` : `29,990,966`	0.000	1.000	0.000
rs4349008 lBF = `7.91478` Chr`13` : `105,803,056`	0.000	1.000	0.000
rs17472393 lBF = `7.45108` Chr`13` : `100,056,531`	0.000	1.000	0.000
rs17076896 lBF = `0.482021` Chr`13` : `19,756,063`	0.000	1.000	0.000
rs2323266 lBF = `0.322191` Chr`13` : `61,965,303`	0.000	1.000	0.000
rs9554348 lBF = `0.224776` Chr`13` : `97,012,355`	0.000	1.000	0.000
rs9536463 lBF = `0.1609` Chr`13` : `54,132,247`	0.000	1.000	0.000
rs150841795 lBF = `0.142928` Chr`13` : `54,137,749`	0.000	1.000	0.000
rs7327064 lBF = `0.110379` Chr`13` : `36,771,017`	0.000	1.000	0.000
rs9556958 lBF = `0.0920075` Chr`13` : `99,100,046`	0.000	1.000	0.000
rs1324913 lBF = `0.00875858` Chr`13` : `74,635,588`	0.000	1.000	0.000
rs9580312 lBF = `0.00270428` Chr`13` : `22,754,093`	0.000	1.000	0.000
rs72655104 lBF = `-0.00113624` Chr`13` : `98,823,146`	0.000	1.000	0.000
rs7324845 lBF = `-0.0123017` Chr`13` : `46,703,142`	0.000	1.000	0.000
rs693839 lBF = `-0.013975` Chr`13` : `80,958,288`	0.000	1.000	0.000
rs1218282 lBF = `-0.0182198` Chr`13` : `79,455,832`	0.000	1.000	0.000
rs1417205 lBF = `-0.0194988` Chr`13` : `47,898,879`	0.000	1.000	0.000
rs732949 lBF = `-0.0237753` Chr`13` : `53,517,884`	0.000	1.000	0.000
rs9561252 lBF = `-0.0321187` Chr`13` : `93,729,285`	0.000	1.000	0.000
rs17369571 lBF = `-0.0334698` Chr`13` : `22,487,625`	0.000	1.000	0.000
rs1305088 lBF = `-0.0360729` Chr`13` : `29,278,450`	0.000	1.000	0.000
rs9561329 lBF = `-0.052235` Chr`13` : `94,011,169`	0.000	1.000	0.000
rs12428035 lBF = `-0.0567497` Chr`13` : `96,300,872`	0.000	1.000	0.000
rs9546711 lBF = `-0.0660648` Chr`13` : `85,054,266`	0.000	1.000	0.000
rs2149423 lBF = `-0.0696858` Chr`13` : `36,772,381`	0.000	1.000	0.000
rs6491411 lBF = `-0.0811288` Chr`13` : `98,904,568`	0.000	1.000	0.000
rs9506942 lBF = `-0.0916619` Chr`13` : `23,412,589`	0.000	1.000	0.000
rs1441264 lBF = `-0.100188` Chr`13` : `79,580,919`	0.000	1.000	0.000
rs4142110 lBF = `3.4996` Chr`13` : `42,754,522`	0.000	1.000	0.000
rs11617740 lBF = `1.77547` Chr`13` : `102,680,126`	0.000	1.000	0.000
rs17085007 lBF = `1.29436` Chr`13` : `27,531,267`	0.000	1.000	0.000
rs2038823 lBF = `0.716143` Chr`13` : `96,951,433`	0.000	1.000	0.000
rs34065801 lBF = `0.422801` Chr`13` : `36,531,548`	0.000	1.000	0.000
rs2755237 lBF = `0.206837` Chr`13` : `41,109,429`	0.000	1.000	0.000
rs9574565 lBF = `0.127341` Chr`13` : `80,668,874`	0.000	1.000	0.000
rs2440012 lBF = `0.0835384` Chr`13` : `19,440,123`	0.000	1.000	0.000
rs9600103 lBF = `0.0750118` Chr`13` : `73,811,879`	0.000	1.000	0.000
rs1335882 lBF = `0.0445703` Chr`13` : `56,832,272`	0.000	1.000	0.000
rs1926320 lBF = `0.039235` Chr`13` : `36,652,617`	0.000	1.000	0.000
rs1021188 lBF = `0.0320154` Chr`13` : `43,116,133`	0.000	1.000	0.000
rs11618202 lBF = `0.0119955` Chr`13` : `31,113,379`	0.000	1.000	0.000
rs2765086 lBF = `0.00291719` Chr`13` : `24,504,955`	0.000	1.000	0.000
rs11840092 lBF = `-0.00062898` Chr`13` : `58,114,748`	0.000	1.000	0.000
rs4773054 lBF = `-0.00277264` Chr`13` : `110,154,028`	0.000	1.000	0.000
rs17714988 lBF = `-0.00333833` Chr`13` : `74,995,660`	0.000	1.000	0.000
rs4148441 lBF = `-0.00913378` Chr`13` : `95,898,207`	0.000	1.000	0.000
rs715921 lBF = `-0.0126854` Chr`13` : `24,795,489`	0.000	1.000	0.000
rs4942242 lBF = `-0.0187406` Chr`13` : `44,217,064`	0.000	1.000	0.000
rs17079247 lBF = `-0.0203209` Chr`13` : `85,665,879`	0.000	1.000	0.000
rs17718828 lBF = `-0.0215309` Chr`13` : `75,128,114`	0.000	1.000	0.000
rs12585963 lBF = `-0.0233729` Chr`13` : `59,953,466`	0.000	1.000	0.000
rs16946160 lBF = `-0.0293461` Chr`13` : `92,203,813`	0.000	1.000	0.000
rs1923834 lBF = `-0.037854` Chr`13` : `28,360,487`	0.000	1.000	0.000
rs9543976 lBF = `-0.0429371` Chr`13` : `76,136,648`	0.000	1.000	0.000
rs561437 lBF = `-0.0559522` Chr`13` : `110,936,227`	0.000	1.000	0.000
rs9919839 lBF = `-0.0581421` Chr`13` : `72,174,353`	0.000	1.000	0.000
rs2991396 lBF = `-0.0667686` Chr`13` : `67,889,386`	0.000	1.000	0.000
rs9532969 lBF = `-0.0718052` Chr`13` : `42,591,839`	0.000	1.000	0.000
rs3742207 lBF = `-0.0989003` Chr`13` : `110,818,598`	0.000	1.000	0.000
rs9536591 lBF = `-0.0990323` Chr`13` : `54,581,087`	0.000	1.000	0.000
rs7323885 lBF = `10.2319` Chr`13` : `24,782,560`	0.000	1.000	0.000
rs11616380 lBF = `7.50102` Chr`13` : `80,705,315`	0.000	1.000	0.000
rs76045649 lBF = `6.14444` Chr`13` : `30,657,971`	0.000	1.000	0.000
rs7335046 lBF = `3.79919` Chr`13` : `100,041,738`	0.000	1.000	0.000
rs941823 lBF = `1.21705` Chr`13` : `41,013,977`	0.000	1.000	0.000
rs17798800 lBF = `1.16738` Chr`13` : `34,950,527`	0.000	1.000	0.000
rs7997462 lBF = `0.332208` Chr`13` : `58,257,165`	0.000	1.000	0.000
rs12429889 lBF = `0.314078` Chr`13` : `74,742,322`	0.000	1.000	0.000
rs201789 lBF = `0.287036` Chr`13` : `50,986,118`	0.000	1.000	0.000
rs2325244 lBF = `0.200622` Chr`13` : `70,430,093`	0.000	1.000	0.000
rs200220 lBF = `0.172577` Chr`13` : `50,960,378`	0.000	1.000	0.000
rs9525916 lBF = `0.17004` Chr`13` : `44,702,869`	0.000	1.000	0.000
rs9591325 lBF = `0.100405` Chr`13` : `50,811,220`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0173

log Bayes Factor = 654.164

contains 9 variants

0.1086

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.9987

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.9948

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.9938

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.9926

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.9844

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.9766

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.9751

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.9743

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.9433

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.9387

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.9360

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9290

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.9204

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9161

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9088

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.8969

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.8893

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.8852

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.8751

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.8678

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.8634

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.8490

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.8485

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.7908

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.7679

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.7471

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.7273

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.7164

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.7162

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.6248

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.5919

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.5902

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.5881

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.5866

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.5856

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.5603

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.5278

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.4438

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.4409

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.4091

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.3930

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.3713

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.3392

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.2846

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2153

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2024

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.1334

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.1289

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0763

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0646

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.0581

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	N80-N98 Noninflammatory disorders of female genital tract
Nested terms	N89.0 Mild vaginal dysplasia N89.1 Moderate vaginal dysplasia N89.2 Severe vaginal dysplasia, not elsewhere classified N89.3 Dysplasia of vagina, unspecified N89.4 Leukoplakia of vagina N89.5 Stricture and atresia of vagina N89.6 Tight hymenal ring N89.7 Haematocolpos N89.8 Other specified noninflammatory disorders of vagina N89.9 Noninflammatory disorder of vagina, unspecified

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)