TreeWAS – [N89] Other noninflammatory disorders of vagina

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs999091 lBF = `22.6696` Chr`2` : `66,603,934`	0.978	0.022	0.000
rs77836103 lBF = `14.9637` Chr`2` : `40,783,993`	0.934	0.066	0.000
rs17586297 lBF = `14.1451` Chr`2` : `4,939,414`	0.872	0.128	0.000
rs115457615 lBF = `15.9194` Chr`2` : `168,583,240`	0.867	0.133	0.000
rs116839510 lBF = `15.1511` Chr`2` : `192,466,150`	0.863	0.137	0.000
rs75985359 lBF = `19.6778` Chr`2` : `141,918,805`	0.860	0.140	0.000
rs11687468 lBF = `13.3728` Chr`2` : `41,847,294`	0.854	0.146	0.000
rs180791571 lBF = `9.12258` Chr`2` : `122,464,495`	0.833	0.167	0.000
rs116419863 lBF = `28.8746` Chr`2` : `79,917,975`	0.800	0.200	0.000
rs74780414 lBF = `12.9103` Chr`2` : `207,951,413`	0.771	0.229	0.000
rs79272324 lBF = `9.62034` Chr`2` : `142,350,168`	0.770	0.230	0.000
rs114076351 lBF = `20.8722` Chr`2` : `7,249,885`	0.769	0.231	0.000
rs147056028 lBF = `2.35667` Chr`2` : `3,677,227`	0.769	0.231	0.000
rs4149433 lBF = `9.85629` Chr`2` : `108,997,262`	0.769	0.231	0.000
rs72788536 lBF = `19.7511` Chr`2` : `21,134,209`	0.767	0.233	0.000
rs138402956 lBF = `3.53154` Chr`2` : `56,197,800`	0.741	0.259	0.000
rs73912949 lBF = `2.01417` Chr`2` : `9,291,234`	0.732	0.268	0.000
rs188074355 lBF = `4.79154` Chr`2` : `123,026,148`	0.730	0.270	0.000
rs6705628 lBF = `4.01162` Chr`2` : `74,208,362`	0.728	0.272	0.000
rs115998140 lBF = `13.5717` Chr`2` : `29,270,537`	0.705	0.295	0.000
rs115190431 lBF = `20.4755` Chr`2` : `42,468,603`	0.705	0.295	0.000
rs56227635 lBF = `17.231` Chr`2` : `128,259,423`	0.697	0.303	0.000
rs114139149 lBF = `14.2732` Chr`2` : `159,748,419`	0.697	0.303	0.000
rs77795656 lBF = `18.6094` Chr`2` : `227,058,243`	0.678	0.322	0.000
rs62135510 lBF = `12.1801` Chr`2` : `46,470,686`	0.677	0.323	0.000
rs359965 lBF = `2.30351` Chr`2` : `219,840,891`	0.659	0.341	0.000
rs114609132 lBF = `14.2901` Chr`2` : `1,551,467`	0.658	0.341	0.000
rs76040961 lBF = `16.9369` Chr`2` : `204,930,391`	0.646	0.354	0.000
rs74774921 lBF = `13.2878` Chr`2` : `145,674,870`	0.643	0.357	0.000
rs115037785 lBF = `21.7029` Chr`2` : `29,341,753`	0.637	0.363	0.000
rs115896270 lBF = `17.0766` Chr`2` : `6,322,348`	0.627	0.373	0.000
rs3827760 lBF = `5.71339` Chr`2` : `109,513,601`	0.617	0.383	0.000
rs116797017 lBF = `26.7156` Chr`2` : `22,472,592`	0.607	0.393	0.000
rs148760487 lBF = `2.17191` Chr`2` : `163,778,613`	0.602	0.397	0.000
rs7572081 lBF = `2.78476` Chr`2` : `15,509,146`	0.587	0.413	0.000
rs75818885 lBF = `10.272` Chr`2` : `56,351,058`	0.585	0.415	0.000
rs115594565 lBF = `14.4329` Chr`2` : `43,372,385`	0.568	0.432	0.000
rs13388915 lBF = `7.77383` Chr`2` : `26,272,602`	0.558	0.442	0.000
rs115127256 lBF = `14.3925` Chr`2` : `226,747,566`	0.538	0.462	0.000
rs36024204 lBF = `18.7188` Chr`2` : `167,376,031`	0.536	0.464	0.000
rs75601073 lBF = `12.1788` Chr`2` : `59,364,237`	0.536	0.464	0.000
rs17020489 lBF = `2.57552` Chr`2` : `81,822,181`	0.535	0.464	0.000
rs116517351 lBF = `17.5697` Chr`2` : `20,160,078`	0.532	0.468	0.000
rs114089901 lBF = `24.7301` Chr`2` : `97,528,099`	0.530	0.470	0.000
rs77640143 lBF = `5.73366` Chr`2` : `189,786,827`	0.519	0.481	0.000
rs78846407 lBF = `16.3089` Chr`2` : `126,678,703`	0.512	0.487	0.000
rs111899708 lBF = `3.65736` Chr`2` : `156,051,135`	0.505	0.494	0.000
rs3769528 lBF = `1.86906` Chr`2` : `33,471,192`	0.485	0.514	0.000
rs74589926 lBF = `12.1504` Chr`2` : `43,903,262`	0.480	0.520	0.000
rs191975838 lBF = `4.25389` Chr`2` : `52,121,667`	0.473	0.527	0.000
rs74469198 lBF = `14.4455` Chr`2` : `20,110,483`	0.468	0.532	0.000
rs187076367 lBF = `2.26739` Chr`2` : `175,636,914`	0.456	0.543	0.000
rs147084229 lBF = `15.3949` Chr`2` : `182,316,247`	0.406	0.594	0.000
rs75293791 lBF = `24.7863` Chr`2` : `102,767,023`	0.394	0.605	0.000
rs181867028 lBF = `0.380125` Chr`2` : `2,545,734`	0.392	0.608	0.000
rs10185178 lBF = `4.19488` Chr`2` : `171,356,274`	0.000	0.615	0.385
rs2112095 lBF = `10.2299` Chr`2` : `41,229,015`	0.383	0.617	0.000
rs79916183 lBF = `24.1831` Chr`2` : `235,146,741`	0.382	0.617	0.000
rs13009537 lBF = `20.9772` Chr`2` : `76,970,796`	0.376	0.624	0.000
rs116998110 lBF = `13.3549` Chr`2` : `72,099,750`	0.368	0.632	0.000
rs115128825 lBF = `15.3403` Chr`2` : `169,748,833`	0.354	0.646	0.000
rs114707893 lBF = `16.0863` Chr`2` : `97,566,051`	0.325	0.675	0.000
rs74853015 lBF = `6.29916` Chr`2` : `36,865,755`	0.324	0.676	0.000
rs78227251 lBF = `17.4957` Chr`2` : `88,977,848`	0.313	0.687	0.000
rs1987842 lBF = `5.12272` Chr`2` : `234,928,517`	0.312	0.688	0.000
rs2708973 lBF = `3.29685` Chr`2` : `113,663,873`	0.307	0.693	0.000
rs191185851 lBF = `1.72756` Chr`2` : `15,876,417`	0.293	0.707	0.000
rs116821480 lBF = `12.384` Chr`2` : `165,547,969`	0.281	0.719	0.000
rs186166314 lBF = `0.489607` Chr`2` : `48,663,037`	0.272	0.728	0.000
rs75210356 lBF = `22.7478` Chr`2` : `113,516,176`	0.267	0.733	0.000
rs1669539 lBF = `0.594279` Chr`2` : `106,615,274`	0.266	0.733	0.000
rs76444744 lBF = `4.62118` Chr`2` : `101,705,345`	0.265	0.735	0.000
rs145244554 lBF = `6.78114` Chr`2` : `178,955,022`	0.258	0.742	0.000
rs114639172 lBF = `14.2055` Chr`2` : `239,638,502`	0.256	0.744	0.000
rs114026882 lBF = `20.8329` Chr`2` : `122,155,032`	0.253	0.747	0.000
rs183373550 lBF = `1.19395` Chr`2` : `141,269,442`	0.000	0.752	0.248
rs7571816 lBF = `0.220888` Chr`2` : `233,077,064`	0.238	0.762	0.000
rs112225386 lBF = `14.6649` Chr`2` : `99,563,294`	0.234	0.766	0.000
rs4669891 lBF = `13.9025` Chr`2` : `12,997,528`	0.227	0.773	0.000
rs75568402 lBF = `14.4019` Chr`2` : `42,189,315`	0.221	0.779	0.000
rs3732064 lBF = `17.419` Chr`2` : `65,074,357`	0.219	0.780	0.000
rs149636167 lBF = `15.5188` Chr`2` : `65,216,817`	0.188	0.812	0.000
rs6708110 lBF = `8.38552` Chr`2` : `4,054,805`	0.184	0.815	0.001
rs146495511 lBF = `11.8047` Chr`2` : `26,825,698`	0.181	0.819	0.000
rs74349453 lBF = `15.9746` Chr`2` : `43,057,069`	0.180	0.820	0.000
rs55677935 lBF = `39.658` Chr`2` : `62,228,013`	0.162	0.838	0.000
rs13391419 lBF = `0.676772` Chr`2` : `222,921,916`	0.161	0.839	0.000
rs115361661 lBF = `16.3048` Chr`2` : `175,349,076`	0.156	0.844	0.000
rs6728302 lBF = `0.123193` Chr`2` : `233,053,961`	0.145	0.855	0.000
rs77367389 lBF = `15.2981` Chr`2` : `37,492,823`	0.142	0.858	0.000
rs72952664 lBF = `8.79899` Chr`2` : `216,969,624`	0.137	0.863	0.000
rs115706318 lBF = `11.1749` Chr`2` : `97,143,761`	0.136	0.864	0.000
rs78024203 lBF = `16.2259` Chr`2` : `125,447,492`	0.135	0.865	0.000
rs115249811 lBF = `0.120835` Chr`2` : `50,927,119`	0.135	0.865	0.000
rs75341787 lBF = `15.3097` Chr`2` : `235,088,991`	0.130	0.870	0.000
rs10460436 lBF = `0.0973712` Chr`2` : `232,815,341`	0.121	0.879	0.000
rs7569074 lBF = `12.5456` Chr`2` : `33,580,954`	0.120	0.879	0.000
rs116561927 lBF = `21.8507` Chr`2` : `221,679,348`	0.119	0.881	0.000
rs76361614 lBF = `22.0553` Chr`2` : `37,527,216`	0.118	0.882	0.000
rs17333649 lBF = `6.63712` Chr`2` : `5,379,187`	0.115	0.885	0.000
rs181660893 lBF = `3.37336` Chr`2` : `82,026,934`	0.113	0.886	0.000
rs115291397 lBF = `6.50118` Chr`2` : `61,060,043`	0.104	0.896	0.000
rs140838333 lBF = `15.8559` Chr`2` : `46,460,880`	0.104	0.896	0.000
rs72647873 lBF = `14.4328` Chr`2` : `179,643,566`	0.100	0.900	0.000
rs80196851 lBF = `0.069502` Chr`2` : `173,789,113`	0.097	0.903	0.000
rs111715478 lBF = `14.7867` Chr`2` : `100,161,578`	0.094	0.904	0.002
rs11124622 lBF = `16.1796` Chr`2` : `38,091,790`	0.089	0.911	0.000
rs4669297 lBF = `6.88015` Chr`2` : `8,738,903`	0.089	0.911	0.000
rs75598744 lBF = `3.85923` Chr`2` : `82,016,463`	0.085	0.914	0.000
rs116465999 lBF = `13.7306` Chr`2` : `167,730,727`	0.081	0.918	0.000
rs17818859 lBF = `0.0516559` Chr`2` : `134,455,240`	0.079	0.921	0.000
rs187293906 lBF = `0.0850575` Chr`2` : `70,665,662`	0.069	0.931	0.000
rs7569072 lBF = `20.5447` Chr`2` : `212,368,252`	0.068	0.932	0.000
rs116375068 lBF = `5.39278` Chr`2` : `12,212,803`	0.068	0.932	0.000
rs56988800 lBF = `1.77665` Chr`2` : `71,688,118`	0.068	0.932	0.000
rs116769405 lBF = `17.8241` Chr`2` : `113,517,977`	0.067	0.933	0.000
rs12613387 lBF = `11.81` Chr`2` : `199,699,922`	0.061	0.939	0.000
rs77169098 lBF = `26.0362` Chr`2` : `97,638,495`	0.061	0.939	0.000
rs148793625 lBF = `14.7971` Chr`2` : `118,117,059`	0.057	0.943	0.000
rs114719950 lBF = `12.6702` Chr`2` : `219,356,131`	0.056	0.944	0.000
rs13413624 lBF = `23.2138` Chr`2` : `151,348,709`	0.055	0.945	0.000
rs74760234 lBF = `0.0491385` Chr`2` : `56,025,873`	0.053	0.947	0.000
rs185580150 lBF = `0.118488` Chr`2` : `27,730,367`	0.053	0.947	0.000
rs72790077 lBF = `17.8671` Chr`2` : `44,788,309`	0.053	0.947	0.000
rs62180472 lBF = `11.2108` Chr`2` : `222,690,063`	0.049	0.951	0.000
rs79423523 lBF = `15.7536` Chr`2` : `58,673,886`	0.049	0.951	0.000
rs62170465 lBF = `15.2866` Chr`2` : `150,814,311`	0.046	0.953	0.000
rs2111471 lBF = `14.438` Chr`2` : `56,559,672`	0.044	0.956	0.000
rs78797065 lBF = `2.29489` Chr`2` : `82,120,517`	0.043	0.956	0.000
rs400197 lBF = `12.4692` Chr`2` : `142,381,682`	0.042	0.958	0.000
rs80098689 lBF = `14.847` Chr`2` : `167,262,238`	0.041	0.959	0.000
rs59195156 lBF = `9.23116` Chr`2` : `43,356,056`	0.039	0.961	0.000
rs78469867 lBF = `11.4083` Chr`2` : `50,891,944`	0.038	0.961	0.000
rs114096014 lBF = `14.0576` Chr`2` : `124,176,013`	0.037	0.963	0.000
rs111910367 lBF = `13.6992` Chr`2` : `143,461,906`	0.033	0.967	0.000
rs7560163 lBF = `0.0323714` Chr`2` : `151,637,936`	0.032	0.968	0.000
rs114306262 lBF = `19.9183` Chr`2` : `158,584,262`	0.032	0.968	0.000
rs10176755 lBF = `0.0259494` Chr`2` : `171,365,889`	0.031	0.968	0.000
rs57484362 lBF = `14.3244` Chr`2` : `43,866,411`	0.031	0.969	0.000
rs76809125 lBF = `14.9284` Chr`2` : `18,402,656`	0.030	0.970	0.000
rs12694997 lBF = `0.0161743` Chr`2` : `242,262,986`	0.000	0.970	0.030
rs4438497 lBF = `0.0167974` Chr`2` : `167,177,359`	0.028	0.972	0.000
rs79322857 lBF = `17.442` Chr`2` : `77,594,873`	0.026	0.974	0.000
rs74591415 lBF = `13.4181` Chr`2` : `64,864,450`	0.026	0.974	0.000
rs116677506 lBF = `0.0855059` Chr`2` : `168,603,447`	0.026	0.974	0.000
rs114592654 lBF = `15.287` Chr`2` : `12,614,388`	0.026	0.974	0.000
rs1801276 lBF = `19.3797` Chr`2` : `227,661,921`	0.025	0.975	0.000
rs77101722 lBF = `14.3457` Chr`2` : `126,788,300`	0.024	0.976	0.000
rs75579756 lBF = `14.6674` Chr`2` : `174,201,924`	0.024	0.976	0.000
rs112242463 lBF = `13.4022` Chr`2` : `45,808,479`	0.024	0.976	0.000
rs72796184 lBF = `10.5503` Chr`2` : `36,084,210`	0.024	0.976	0.000
rs183699028 lBF = `0.0221785` Chr`2` : `14,157,255`	0.022	0.978	0.000
rs113153761 lBF = `6.16497` Chr`2` : `127,727,764`	0.019	0.981	0.000
rs7561107 lBF = `0.0260966` Chr`2` : `129,029,402`	0.018	0.981	0.000
rs116567155 lBF = `9.80102` Chr`2` : `226,816,897`	0.018	0.982	0.000
rs13414205 lBF = `0.0177885` Chr`2` : `44,662,475`	0.018	0.982	0.000
rs7606224 lBF = `0.021974` Chr`2` : `190,643,649`	0.018	0.982	0.000
rs35836525 lBF = `18.108` Chr`2` : `97,601,693`	0.018	0.982	0.000
rs80319776 lBF = `29.4798` Chr`2` : `149,090,166`	0.017	0.983	0.000
rs76506302 lBF = `0.0136363` Chr`2` : `200,671,903`	0.017	0.983	0.000
rs6746528 lBF = `17.4769` Chr`2` : `241,659,675`	0.016	0.983	0.000
rs113403741 lBF = `11.9832` Chr`2` : `226,895,738`	0.016	0.984	0.001
rs16984718 lBF = `4.60309` Chr`2` : `18,509,254`	0.015	0.984	0.000
rs2241685 lBF = `0.0407332` Chr`2` : `1,925,993`	0.000	0.986	0.014
rs11679753 lBF = `0.0149331` Chr`2` : `62,552,321`	0.014	0.986	0.000
rs76863546 lBF = `18.7284` Chr`2` : `51,383,069`	0.013	0.987	0.000
rs12478336 lBF = `13.7791` Chr`2` : `172,046,582`	0.012	0.988	0.000
rs115089939 lBF = `5.12906` Chr`2` : `139,874,228`	0.011	0.988	0.000
rs190183456 lBF = `0.0122495` Chr`2` : `51,682,455`	0.011	0.989	0.000
rs74669452 lBF = `14.43` Chr`2` : `234,623,898`	0.011	0.989	0.000
rs11888485 lBF = `0.0124095` Chr`2` : `118,687,232`	0.010	0.989	0.000
rs116018140 lBF = `24.9673` Chr`2` : `106,054,384`	0.003	0.990	0.007
rs295130 lBF = `24.0264` Chr`2` : `201,229,984`	0.009	0.991	0.000
rs3769477 lBF = `12.6651` Chr`2` : `201,180,085`	0.009	0.991	0.000
rs55794209 lBF = `0.0105593` Chr`2` : `9,645,632`	0.008	0.992	0.000
rs13424957 lBF = `0.00932075` Chr`2` : `165,750,390`	0.008	0.992	0.000
rs116073216 lBF = `12.4916` Chr`2` : `16,166,362`	0.008	0.992	0.000
rs4664308 lBF = `-0.104001` Chr`2` : `160,917,497`	0.000	0.992	0.008
rs4321325 lBF = `-0.0642656` Chr`2` : `127,950,997`	0.000	0.992	0.008
rs1877101 lBF = `3.49611` Chr`2` : `13,726,613`	0.007	0.992	0.001
rs10208407 lBF = `0.00654149` Chr`2` : `161,757,129`	0.007	0.992	0.000
rs75638626 lBF = `0.0109882` Chr`2` : `147,708,864`	0.007	0.993	0.000
rs7578199 lBF = `-0.0134561` Chr`2` : `242,192,848`	0.000	0.993	0.007
rs77327606 lBF = `11.6049` Chr`2` : `144,271,136`	0.007	0.993	0.000
rs77492256 lBF = `13.3135` Chr`2` : `180,294,914`	0.007	0.993	0.000
rs115242848 lBF = `0.0130979` Chr`2` : `119,507,607`	0.007	0.993	0.000
rs113542870 lBF = `14.9563` Chr`2` : `115,489,878`	0.007	0.993	0.000
rs138440701 lBF = `15.2454` Chr`2` : `113,783,743`	0.007	0.993	0.000
rs74456537 lBF = `16.3397` Chr`2` : `158,865,364`	0.007	0.993	0.000
rs78882373 lBF = `14.656` Chr`2` : `150,846,305`	0.006	0.994	0.000
rs116251179 lBF = `15.6134` Chr`2` : `60,834,777`	0.006	0.994	0.000
rs62133575 lBF = `17.8576` Chr`2` : `18,239,336`	0.006	0.994	0.000
rs111724274 lBF = `36.4129` Chr`2` : `200,713,124`	0.006	0.994	0.000
rs7588591 lBF = `0.0853714` Chr`2` : `55,418,935`	0.000	0.994	0.006
rs140009341 lBF = `2.92393` Chr`2` : `137,190,884`	0.006	0.994	0.000
rs76157199 lBF = `10.0516` Chr`2` : `98,541,874`	0.005	0.994	0.000
rs113984483 lBF = `13.9687` Chr`2` : `35,302,577`	0.005	0.995	0.000
rs78058190 lBF = `10.0519` Chr`2` : `219,699,999`	0.003	0.995	0.002
rs6758183 lBF = `-0.0255315` Chr`2` : `227,000,986`	0.005	0.995	0.000
rs116600709 lBF = `13.3425` Chr`2` : `111,736,824`	0.005	0.995	0.000
rs10179686 lBF = `6.26048` Chr`2` : `135,214,570`	0.004	0.995	0.001
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rs181284109 lBF = `0` Chr`2` : `219,345,712`	0.001	0.999	0.001
rs187068710 lBF = `0` Chr`2` : `68,639,716`	0.001	0.999	0.001
rs149335852 lBF = `-0.00000066` Chr`2` : `65,423,674`	0.000	0.999	0.001
rs73962318 lBF = `-0.0037169` Chr`2` : `143,854,934`	0.001	0.999	0.000
rs150734725 lBF = `0.0001844` Chr`2` : `195,151,205`	0.001	0.999	0.000
rs16830366 lBF = `-0.00000183` Chr`2` : `199,585,556`	0.001	0.999	0.000
rs11886159 lBF = `-0.00000935` Chr`2` : `67,243,109`	0.001	0.999	0.000
rs138258488 lBF = `-0.00001607` Chr`2` : `82,007,018`	0.001	0.999	0.000
rs16839626 lBF = `-0.00001709` Chr`2` : `204,089,730`	0.001	0.999	0.000
rs7570259 lBF = `-0.00001995` Chr`2` : `23,202,248`	0.001	0.999	0.000
rs78556816 lBF = `-0.00002761` Chr`2` : `68,386,026`	0.000	0.999	0.001
rs144363312 lBF = `-0.00003044` Chr`2` : `239,839,784`	0.001	0.999	0.000
rs56207248 lBF = `6.58472` Chr`2` : `25,065,986`	0.001	0.999	0.000
rs6716368 lBF = `-0.00006226` Chr`2` : `139,924,118`	0.000	0.999	0.000
rs114230339 lBF = `-0.00008085` Chr`2` : `176,859,523`	0.001	0.999	0.000
rs17515225 lBF = `-0.0191801` Chr`2` : `141,545,755`	0.001	0.999	0.000
rs17475168 lBF = `14.4134` Chr`2` : `65,598,866`	0.001	0.999	0.000
rs6707470 lBF = `0.018052` Chr`2` : `158,346,570`	0.001	0.999	0.000
rs9309513 lBF = `13.6223` Chr`2` : `77,555,231`	0.001	0.999	0.000
rs4140885 lBF = `-0.0109011` Chr`2` : `188,333,064`	0.001	0.999	0.000
rs4027132 lBF = `-0.0193905` Chr`2` : `12,037,492`	0.001	0.999	0.000
rs997277 lBF = `0.251184` Chr`2` : `189,750,863`	0.001	0.999	0.000
rs16840760 lBF = `-0.00033046` Chr`2` : `204,983,554`	0.001	0.999	0.000
rs150006865 lBF = `16.2642` Chr`2` : `195,586,736`	0.001	0.999	0.000
rs116609675 lBF = `13.7421` Chr`2` : `21,479,113`	0.001	0.999	0.000
rs988958 lBF = `0.0265136` Chr`2` : `42,287,306`	0.001	0.999	0.000
rs72817301 lBF = `8.95428` Chr`2` : `78,333,664`	0.000	0.999	0.000
rs7605827 lBF = `0.056964` Chr`2` : `15,598,740`	0.000	0.999	0.001
rs3755206 lBF = `0.00127549` Chr`2` : `36,683,428`	0.001	0.999	0.000
rs148822902 lBF = `-0.00235354` Chr`2` : `5,129,531`	0.000	0.999	0.001
rs7587026 lBF = `0.0569434` Chr`2` : `166,978,750`	0.001	0.999	0.000
rs150416243 lBF = `-0.00267899` Chr`2` : `212,216,854`	0.001	0.999	0.000
rs115011873 lBF = `13.7122` Chr`2` : `131,517,553`	0.001	0.999	0.000
rs77130284 lBF = `6.54298` Chr`2` : `204,805,211`	0.001	0.999	0.000
rs16832011 lBF = `-0.00472629` Chr`2` : `136,545,299`	0.000	0.999	0.001
rs698833 lBF = `-0.016463` Chr`2` : `44,735,438`	0.001	0.999	0.000
rs12472274 lBF = `-0.0393493` Chr`2` : `239,095,422`	0.001	0.999	0.000
rs12997796 lBF = `-0.0500373` Chr`2` : `86,974,318`	0.001	0.999	0.000
rs10201587 lBF = `23.0216` Chr`2` : `202,202,791`	0.001	0.999	0.000
rs17636747 lBF = `13.8903` Chr`2` : `105,877,870`	0.001	0.999	0.000
rs6545278 lBF = `0.0374582` Chr`2` : `52,706,052`	0.000	0.999	0.001
rs7599312 lBF = `-0.0764356` Chr`2` : `213,413,231`	0.001	0.999	0.000
rs73019330 lBF = `12.1394` Chr`2` : `168,576,763`	0.001	0.999	0.000
rs1067327 lBF = `1.60261` Chr`2` : `44,628,529`	0.001	0.999	0.000
rs149960642 lBF = `0.0200289` Chr`2` : `14,203,645`	0.001	0.999	0.000
rs144855337 lBF = `0.00287584` Chr`2` : `41,445,679`	0.001	0.999	0.000
rs7577925 lBF = `-0.0083171` Chr`2` : `134,040,519`	0.001	0.999	0.000
rs114198037 lBF = `25.2397` Chr`2` : `76,924,347`	0.001	0.999	0.000
rs13012498 lBF = `19.1236` Chr`2` : `175,594,387`	0.001	0.999	0.000
rs12623976 lBF = `-0.024636` Chr`2` : `119,936,683`	0.001	0.999	0.000
rs78141093 lBF = `15.0604` Chr`2` : `27,502,134`	0.001	0.999	0.000
rs4669226 lBF = `1.10007` Chr`2` : `8,053,597`	0.000	0.999	0.001
rs4544377 lBF = `0.0702152` Chr`2` : `156,256,701`	0.001	0.999	0.000
rs16858164 lBF = `0.032744` Chr`2` : `171,190,117`	0.001	0.999	0.000
rs2900976 lBF = `-0.0425114` Chr`2` : `71,958,480`	0.000	0.999	0.001
rs1801251 lBF = `5.32606` Chr`2` : `233,633,460`	0.001	0.999	0.000
rs2041840 lBF = `0.935867` Chr`2` : `37,467,264`	0.000	0.999	0.001
rs13010639 lBF = `-0.0619494` Chr`2` : `231,035,745`	0.000	0.999	0.001
rs80249880 lBF = `15.9037` Chr`2` : `149,827,104`	0.000	0.999	0.001
rs77774752 lBF = `14.2158` Chr`2` : `56,960,157`	0.001	0.999	0.000
rs3770657 lBF = `7.98305` Chr`2` : `67,630,980`	0.001	0.999	0.000
rs745109 lBF = `0.00948714` Chr`2` : `86,841,069`	0.001	0.999	0.000
rs6758290 lBF = `-0.100002` Chr`2` : `105,864,826`	0.001	0.999	0.000
rs114763188 lBF = `9.2156` Chr`2` : `227,016,204`	0.001	0.999	0.000
rs4321386 lBF = `-0.0109578` Chr`2` : `102,613,013`	0.000	0.999	0.001
rs1520339 lBF = `-0.0386485` Chr`2` : `156,751,921`	0.001	0.999	0.000
rs78034869 lBF = `14.6594` Chr`2` : `173,203,198`	0.000	0.999	0.001
rs114202713 lBF = `10.9168` Chr`2` : `50,748,990`	0.001	0.999	0.000
rs12477314 lBF = `1.1954` Chr`2` : `239,877,148`	0.000	0.999	0.001
rs12478234 lBF = `0.0120134` Chr`2` : `180,334,969`	0.000	0.999	0.001
rs13403179 lBF = `-0.00126416` Chr`2` : `15,482,752`	0.000	0.999	0.000
rs10153620 lBF = `-0.0504216` Chr`2` : `206,060,637`	0.001	0.999	0.000
rs12468533 lBF = `20.817` Chr`2` : `68,457,573`	0.001	0.999	0.000
rs116045601 lBF = `19.3299` Chr`2` : `31,490,659`	0.001	0.999	0.000
rs11555646 lBF = `5.3777` Chr`2` : `233,599,904`	0.001	0.999	0.000
rs4305317 lBF = `0.959362` Chr`2` : `42,080,624`	0.001	0.999	0.000
rs3755132 lBF = `-0.0833113` Chr`2` : `15,729,820`	0.000	0.999	0.001
rs62106258 lBF = `13.2334` Chr`2` : `417,167`	0.001	0.999	0.000
rs68108873 lBF = `8.01808` Chr`2` : `170,121,734`	0.001	0.999	0.000
rs7355746 lBF = `0.0229413` Chr`2` : `145,351,821`	0.000	0.999	0.001
rs1158867 lBF = `0.0184957` Chr`2` : `128,177,377`	0.001	0.999	0.000
rs16856247 lBF = `0.0110545` Chr`2` : `169,784,413`	0.000	0.999	0.000
rs10197862 lBF = `23.8501` Chr`2` : `102,966,549`	0.000	0.999	0.001
rs7572554 lBF = `21.2849` Chr`2` : `68,435,280`	0.001	0.999	0.000
rs17412531 lBF = `9.90515` Chr`2` : `192,154,412`	0.001	0.999	0.000
rs4854307 lBF = `2.18079` Chr`2` : `443,281`	0.001	0.999	0.000
rs6545977 lBF = `1.82159` Chr`2` : `63,301,164`	0.000	0.999	0.001
rs12991146 lBF = `0.27861` Chr`2` : `60,111,222`	0.000	0.999	0.001
rs13393577 lBF = `0.0141586` Chr`2` : `213,296,863`	0.000	0.999	0.001
rs1067352 lBF = `0.0127334` Chr`2` : `44,669,724`	0.001	0.999	0.000
rs11681930 lBF = `-0.0225898` Chr`2` : `206,063,298`	0.001	0.999	0.000
rs7580658 lBF = `-0.0287567` Chr`2` : `128,159,261`	0.001	0.999	0.000
rs3771175 lBF = `24.1895` Chr`2` : `102,960,210`	0.000	0.999	0.001
rs75303653 lBF = `12.0682` Chr`2` : `150,465,838`	0.000	0.999	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0173

log Bayes Factor = 654.164

contains 9 variants

0.1086

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.9987

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.9948

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.9938

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.9926

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.9844

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.9766

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.9751

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.9743

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.9433

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.9387

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.9360

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9290

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.9204

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9161

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9088

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.8969

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.8893

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.8852

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.8751

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.8678

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.8634

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.8490

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.8485

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.7908

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.7679

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.7471

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.7273

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.7164

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.7162

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.6248

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.5919

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.5902

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.5881

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.5866

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.5856

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.5603

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.5278

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.4438

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.4409

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.4091

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.3930

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.3713

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.3392

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.2846

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2153

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2024

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.1334

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.1289

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0763

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0646

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.0581

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	N80-N98 Noninflammatory disorders of female genital tract
Nested terms	N89.0 Mild vaginal dysplasia N89.1 Moderate vaginal dysplasia N89.2 Severe vaginal dysplasia, not elsewhere classified N89.3 Dysplasia of vagina, unspecified N89.4 Leukoplakia of vagina N89.5 Stricture and atresia of vagina N89.6 Tight hymenal ring N89.7 Haematocolpos N89.8 Other specified noninflammatory disorders of vagina N89.9 Noninflammatory disorder of vagina, unspecified

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)