TreeWAS – [N89] Other noninflammatory disorders of vagina

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs11872184 lBF = `3.70756` Chr`18` : `2,739,733`	0.805	0.195	0.000
rs72921303 lBF = `15.2522` Chr`18` : `44,560,038`	0.788	0.212	0.000
rs77307613 lBF = `10.1553` Chr`18` : `66,961,498`	0.782	0.218	0.000
rs79204427 lBF = `15.0146` Chr`18` : `47,693,130`	0.777	0.222	0.000
rs16975050 lBF = `1.76679` Chr`18` : `39,187,170`	0.762	0.238	0.000
rs61743415 lBF = `16.7694` Chr`18` : `44,559,844`	0.747	0.253	0.000
rs78395048 lBF = `13.3551` Chr`18` : `50,372,363`	0.731	0.269	0.000
rs77759352 lBF = `23.6884` Chr`18` : `19,521,256`	0.713	0.286	0.000
rs78723535 lBF = `19.594` Chr`18` : `65,161,477`	0.643	0.356	0.000
rs17056274 lBF = `2.97116` Chr`18` : `72,787,046`	0.573	0.426	0.000
rs111504720 lBF = `20.4846` Chr`18` : `44,156,753`	0.570	0.430	0.000
rs9963330 lBF = `1.29194` Chr`18` : `56,020,509`	0.525	0.475	0.000
rs181028361 lBF = `21.8082` Chr`18` : `9,792,830`	0.488	0.512	0.000
rs79765414 lBF = `2.16441` Chr`18` : `3,325,609`	0.428	0.572	0.000
rs80226779 lBF = `18.8837` Chr`18` : `57,590,566`	0.401	0.599	0.000
rs117127635 lBF = `12.0334` Chr`18` : `56,130,563`	0.331	0.669	0.000
rs28496996 lBF = `0.602667` Chr`18` : `1,952,127`	0.322	0.677	0.000
rs185818984 lBF = `3.06107` Chr`18` : `22,958,783`	0.283	0.717	0.000
rs117531393 lBF = `17.074` Chr`18` : `25,835,185`	0.275	0.725	0.000
rs3786431 lBF = `0.862458` Chr`18` : `3,814,148`	0.261	0.739	0.000
rs75903686 lBF = `17.2493` Chr`18` : `31,898,334`	0.223	0.776	0.000
rs356150 lBF = `0.411912` Chr`18` : `75,373,447`	0.165	0.835	0.000
rs16964886 lBF = `2.33933` Chr`18` : `31,321,994`	0.159	0.841	0.000
rs78788148 lBF = `0.180442` Chr`18` : `24,866,049`	0.149	0.850	0.000
rs76650652 lBF = `0.158735` Chr`18` : `31,088,078`	0.130	0.870	0.000
rs79850769 lBF = `13.2202` Chr`18` : `12,373,469`	0.115	0.885	0.000
rs80008499 lBF = `15.2522` Chr`18` : `69,654,690`	0.107	0.893	0.000
rs78346601 lBF = `13.2849` Chr`18` : `54,574,972`	0.094	0.906	0.000
rs76558737 lBF = `11.0862` Chr`18` : `19,432,268`	0.087	0.913	0.000
rs41512245 lBF = `15.7775` Chr`18` : `73,278,094`	0.067	0.933	0.000
rs76037241 lBF = `15.2229` Chr`18` : `3,178,541`	0.053	0.947	0.000
rs58280396 lBF = `16.5379` Chr`18` : `55,720,852`	0.044	0.956	0.000
rs78076094 lBF = `17.3177` Chr`18` : `6,968,799`	0.036	0.964	0.000
rs60241046 lBF = `0.389149` Chr`18` : `31,390,868`	0.033	0.966	0.000
rs78405110 lBF = `29.5365` Chr`18` : `45,329,408`	0.027	0.967	0.007
rs28645223 lBF = `11.5532` Chr`18` : `75,587,548`	0.031	0.969	0.000
rs7226835 lBF = `0.0320584` Chr`18` : `37,165,305`	0.029	0.971	0.000
rs76888481 lBF = `17.9427` Chr`18` : `67,521,736`	0.029	0.971	0.000
rs17088434 lBF = `21.3351` Chr`18` : `71,513,365`	0.024	0.976	0.000
rs79294993 lBF = `19.4903` Chr`18` : `48,600,991`	0.021	0.979	0.000
rs78554423 lBF = `15.8567` Chr`18` : `27,227,214`	0.014	0.986	0.000
rs76719755 lBF = `19.161` Chr`18` : `66,910,435`	0.013	0.986	0.000
rs28417927 lBF = `12.3757` Chr`18` : `58,226,910`	0.013	0.986	0.000
rs78765259 lBF = `18.3432` Chr`18` : `42,749,311`	0.013	0.987	0.000
rs36064717 lBF = `16.1111` Chr`18` : `45,764,569`	0.013	0.987	0.000
rs78775229 lBF = `15.1154` Chr`18` : `36,175,363`	0.013	0.987	0.000
rs72939083 lBF = `14.648` Chr`18` : `62,615,975`	0.013	0.987	0.000
rs117744154 lBF = `14.3775` Chr`18` : `27,353,198`	0.012	0.988	0.000
rs117655798 lBF = `13.1918` Chr`18` : `27,437,530`	0.011	0.989	0.000
rs16976171 lBF = `1.75054` Chr`18` : `40,059,621`	0.011	0.989	0.000
rs117869970 lBF = `11.9593` Chr`18` : `4,405,736`	0.009	0.991	0.000
rs79268501 lBF = `16.8497` Chr`18` : `55,979,238`	0.009	0.991	0.000
rs72874026 lBF = `19.9502` Chr`18` : `6,075,197`	0.009	0.991	0.000
rs76342601 lBF = `14.7362` Chr`18` : `42,826,367`	0.009	0.991	0.000
rs3914785 lBF = `2.08326` Chr`18` : `2,452,177`	0.008	0.992	0.000
rs2156107 lBF = `-0.0218139` Chr`18` : `70,546,470`	0.008	0.992	0.000
rs12606301 lBF = `0.465056` Chr`18` : `40,023,782`	0.008	0.992	0.000
rs16976358 lBF = `1.04673` Chr`18` : `40,191,571`	0.008	0.992	0.000
rs79756656 lBF = `7.23885` Chr`18` : `77,530,785`	0.008	0.992	0.000
rs62095487 lBF = `8.49554` Chr`18` : `10,588,095`	0.007	0.993	0.000
rs142981069 lBF = `-0.00651573` Chr`18` : `58,826,022`	0.007	0.993	0.000
Affx-15339481 lBF = `11.0701` Chr`18` : `6,958,609`	0.007	0.993	0.000
rs75743047 lBF = `9.47116` Chr`18` : `33,411,351`	0.007	0.993	0.000
rs77665194 lBF = `15.0844` Chr`18` : `12,455,794`	0.006	0.994	0.000
rs118148296 lBF = `8.65957` Chr`18` : `33,640,579`	0.006	0.994	0.000
rs117411365 lBF = `26.5974` Chr`18` : `67,468,303`	0.003	0.994	0.003
rs77090108 lBF = `11.3929` Chr`18` : `56,080,241`	0.006	0.994	0.000
rs7231412 lBF = `0.776366` Chr`18` : `40,105,657`	0.005	0.995	0.000
rs346452 lBF = `0.0727667` Chr`18` : `39,940,966`	0.005	0.995	0.000
rs11877305 lBF = `0.00431603` Chr`18` : `75,451,077`	0.005	0.995	0.000
rs117149178 lBF = `10.7957` Chr`18` : `6,749,496`	0.005	0.995	0.000
rs8096445 lBF = `0.00588351` Chr`18` : `48,713,040`	0.004	0.995	0.000
rs118162784 lBF = `12.6345` Chr`18` : `332,259`	0.004	0.996	0.000
rs117085966 lBF = `16.4406` Chr`18` : `33,048,129`	0.004	0.996	0.000
rs146408330 lBF = `0.056169` Chr`18` : `4,395,500`	0.004	0.996	0.000
rs74907094 lBF = `13.9899` Chr`18` : `60,886,937`	0.004	0.996	0.000
rs117576029 lBF = `15.0372` Chr`18` : `33,093,123`	0.003	0.996	0.000
rs1346987 lBF = `0.787418` Chr`18` : `40,102,641`	0.004	0.996	0.000
rs1146075 lBF = `0.00363167` Chr`18` : `1,366,301`	0.000	0.997	0.003
rs9961113 lBF = `0.101342` Chr`18` : `75,605,399`	0.003	0.997	0.000
rs7235528 lBF = `0.136261` Chr`18` : `40,058,882`	0.003	0.997	0.000
rs17492699 lBF = `0.00291966` Chr`18` : `25,480,514`	0.003	0.997	0.000
rs8088922 lBF = `14.0675` Chr`18` : `6,976,513`	0.003	0.997	0.000
rs16942421 lBF = `0.282577` Chr`18` : `24,156,425`	0.003	0.997	0.000
rs346221 lBF = `0.176096` Chr`18` : `40,023,306`	0.000	0.997	0.003
rs142176337 lBF = `1.89382` Chr`18` : `57,581,487`	0.002	0.998	0.000
rs8090196 lBF = `0.155151` Chr`18` : `40,075,956`	0.002	0.998	0.000
rs2048485 lBF = `58.085` Chr`18` : `42,090,667`	0.000	0.998	0.002
rs116303449 lBF = `0.0012028` Chr`18` : `32,956,931`	0.002	0.998	0.000
rs118112796 lBF = `23.7546` Chr`18` : `76,442,139`	0.002	0.998	0.000
rs9956738 lBF = `1.94999` Chr`18` : `49,940,973`	0.002	0.998	0.000
rs10503019 lBF = `0.0660409` Chr`18` : `55,454,377`	0.002	0.998	0.000
rs76151551 lBF = `7.90722` Chr`18` : `62,136,863`	0.002	0.998	0.000
rs16977065 lBF = `0.00471124` Chr`18` : `40,437,651`	0.001	0.998	0.001
rs11082098 lBF = `0.00614239` Chr`18` : `36,198,732`	0.002	0.998	0.000
rs6506284 lBF = `0.00043585` Chr`18` : `5,030,023`	0.001	0.998	0.000
rs1982602 lBF = `8.16528` Chr`18` : `67,813,357`	0.000	0.999	0.001
rs8088420 lBF = `-0.0330147` Chr`18` : `56,511,908`	0.000	0.999	0.001
rs4133168 lBF = `-0.0318754` Chr`18` : `22,812,508`	0.000	0.999	0.001
rs9304270 lBF = `1.42842` Chr`18` : `39,937,509`	0.001	0.999	0.000
rs1372474 lBF = `-0.0290872` Chr`18` : `51,116,832`	0.000	0.999	0.001
rs9949526 lBF = `0.00125912` Chr`18` : `77,374,321`	0.000	0.999	0.001
rs75000611 lBF = `0.00043597` Chr`18` : `77,328,615`	0.001	0.999	0.000
rs62085423 lBF = `13.4303` Chr`18` : `4,459,889`	0.001	0.999	0.000
rs7238309 lBF = `0.00002807` Chr`18` : `55,145,692`	0.001	0.999	0.000
rs28877609 lBF = `0.0005859` Chr`18` : `2,865,505`	0.001	0.999	0.000
rs75729340 lBF = `21.0937` Chr`18` : `31,480,742`	0.001	0.999	0.000
rs11877878 lBF = `0.22366` Chr`18` : `23,764,235`	0.001	0.999	0.000
rs17561091 lBF = `19.659` Chr`18` : `33,053,097`	0.001	0.999	0.000
rs8098064 lBF = `-0.00017223` Chr`18` : `8,209,269`	0.001	0.999	0.000
rs12965577 lBF = `-0.0398172` Chr`18` : `31,675,680`	0.001	0.999	0.000
rs8097810 lBF = `0.0150825` Chr`18` : `23,785,648`	0.001	0.999	0.000
rs143037915 lBF = `0.00006957` Chr`18` : `44,973,221`	0.001	0.999	0.000
rs2168303 lBF = `0.00005588` Chr`18` : `58,375,934`	0.001	0.999	0.000
rs9950590 lBF = `0.00003279` Chr`18` : `8,043,661`	0.001	0.999	0.000
rs9948784 lBF = `0` Chr`18` : `72,897,161`	0.001	0.999	0.001
rs148187869 lBF = `0` Chr`18` : `25,261,838`	0.001	0.999	0.001
rs190343823 lBF = `0` Chr`18` : `33,835,336`	0.001	0.999	0.001
rs192178588 lBF = `0` Chr`18` : `25,223,007`	0.001	0.999	0.001
rs148138116 lBF = `0` Chr`18` : `53,201,480`	0.001	0.999	0.001
rs145717157 lBF = `0` Chr`18` : `26,713,277`	0.001	0.999	0.001
rs138098194 lBF = `0` Chr`18` : `64,507,408`	0.001	0.999	0.001
rs141475580 lBF = `0` Chr`18` : `5,936,481`	0.001	0.999	0.001
rs146111930 lBF = `0` Chr`18` : `25,262,370`	0.001	0.999	0.001
rs116989867 lBF = `0` Chr`18` : `77,172,316`	0.001	0.999	0.001
rs75433892 lBF = `0` Chr`18` : `11,712,922`	0.001	0.999	0.001
rs141318925 lBF = `0` Chr`18` : `6,623,040`	0.001	0.999	0.001
rs148133787 lBF = `0` Chr`18` : `25,227,459`	0.001	0.999	0.001
rs184167040 lBF = `0` Chr`18` : `39,038,041`	0.001	0.999	0.001
rs190650493 lBF = `0` Chr`18` : `30,625,009`	0.001	0.999	0.001
rs7240382 lBF = `-0.0820825` Chr`18` : `74,450,640`	0.000	0.999	0.001
rs12960119 lBF = `0.0613299` Chr`18` : `23,614,703`	0.001	0.999	0.000
rs77741790 lBF = `-0.00001874` Chr`18` : `6,894,475`	0.000	0.999	0.001
rs76752096 lBF = `-0.0000229` Chr`18` : `25,137,059`	0.000	0.999	0.001
rs9953852 lBF = `-0.0000316` Chr`18` : `33,097,960`	0.001	0.999	0.000
rs7243299 lBF = `-0.00003336` Chr`18` : `7,755,771`	0.001	0.999	0.000
rs643507 lBF = `0.0153565` Chr`18` : `2,946,291`	0.001	0.999	0.000
rs7233060 lBF = `0.033984` Chr`18` : `77,392,379`	0.001	0.999	0.000
rs1442089 lBF = `-0.00174034` Chr`18` : `51,107,079`	0.001	0.999	0.000
rs77126375 lBF = `14.4018` Chr`18` : `40,962,485`	0.001	0.999	0.000
rs509477 lBF = `0.0730442` Chr`18` : `32,559,295`	0.001	0.999	0.000
rs1517037 lBF = `-0.0381763` Chr`18` : `56,878,274`	0.000	0.999	0.001
rs11662510 lBF = `6.32011` Chr`18` : `77,276,440`	0.000	0.999	0.001
rs12455557 lBF = `0.122909` Chr`18` : `46,317,088`	0.000	0.999	0.001
rs72943036 lBF = `15.0243` Chr`18` : `60,845,776`	0.001	0.999	0.000
rs116929418 lBF = `14.6907` Chr`18` : `22,468,251`	0.001	0.999	0.000
rs2298574 lBF = `-0.0474444` Chr`18` : `25,569,058`	0.000	0.999	0.001
rs10502575 lBF = `0.0134591` Chr`18` : `29,336,591`	0.001	0.999	0.000
rs117898212 lBF = `11.208` Chr`18` : `46,947,056`	0.001	0.999	0.000
rs12970291 lBF = `0.0586602` Chr`18` : `73,017,234`	0.001	0.999	0.000
rs2717128 lBF = `-0.071274` Chr`18` : `74,987,632`	0.001	0.999	0.000
rs117675380 lBF = `13.6306` Chr`18` : `811,672`	0.001	0.999	0.000
rs149615216 lBF = `5.16337` Chr`18` : `47,106,028`	0.001	0.999	0.000
rs9951602 lBF = `-0.029318` Chr`18` : `76,657,779`	0.001	0.999	0.000
rs78289709 lBF = `16.6994` Chr`18` : `27,498,046`	0.000	0.999	0.000
rs140959648 lBF = `22.6332` Chr`18` : `59,005,176`	0.000	0.999	0.000
rs117242132 lBF = `21.0067` Chr`18` : `45,672,152`	0.001	0.999	0.000
rs9961915 lBF = `-0.0540138` Chr`18` : `24,687,324`	0.001	0.999	0.000
rs206626 lBF = `0.0301974` Chr`18` : `10,321,347`	0.001	0.999	0.000
rs74968339 lBF = `14.8939` Chr`18` : `52,753,199`	0.000	0.999	0.000
rs17058466 lBF = `-0.00023739` Chr`18` : `73,605,345`	0.000	0.999	0.000
rs1992269 lBF = `-0.0215628` Chr`18` : `1,872,317`	0.001	0.999	0.000
rs35735708 lBF = `10.9325` Chr`18` : `72,038,965`	0.000	0.999	0.000
rs12969657 lBF = `0.440144` Chr`18` : `67,536,496`	0.000	0.999	0.000
rs17207042 lBF = `0.363174` Chr`18` : `67,537,351`	0.000	0.999	0.000
rs35531140 lBF = `12.5071` Chr`18` : `41,157,177`	0.000	0.999	0.000
rs117120368 lBF = `1.98635` Chr`18` : `70,129,472`	0.000	0.999	0.000
rs7226371 lBF = `0.0494513` Chr`18` : `1,850,771`	0.000	0.999	0.000
rs9953270 lBF = `-0.0523949` Chr`18` : `24,687,371`	0.001	0.999	0.000
rs111720385 lBF = `5.32077` Chr`18` : `43,373,121`	0.000	1.000	0.000
rs1351435 lBF = `0.186306` Chr`18` : `49,404,964`	0.000	1.000	0.000
rs1943199 lBF = `-0.029086` Chr`18` : `73,462,854`	0.000	1.000	0.000
rs117320784 lBF = `13.3956` Chr`18` : `58,896,482`	0.000	1.000	0.000
rs144653651 lBF = `0.0105332` Chr`18` : `12,909,504`	0.000	1.000	0.000
rs10438978 lBF = `0.0708836` Chr`18` : `47,158,186`	0.000	1.000	0.000
rs589398 lBF = `0.0353588` Chr`18` : `5,311,892`	0.000	1.000	0.000
rs4797559 lBF = `-0.031608` Chr`18` : `11,583,447`	0.000	1.000	0.000
rs8084125 lBF = `0.0983154` Chr`18` : `74,952,758`	0.000	1.000	0.000
rs12955474 lBF = `-0.0227347` Chr`18` : `57,152,038`	0.000	1.000	0.000
rs79863952 lBF = `10.9902` Chr`18` : `74,602,869`	0.000	1.000	0.000
rs188403275 lBF = `0.470526` Chr`18` : `35,015,148`	0.000	1.000	0.000
rs7241918 lBF = `0.132748` Chr`18` : `47,160,953`	0.000	1.000	0.000
rs7240405 lBF = `0.0955091` Chr`18` : `47,159,090`	0.000	1.000	0.000
rs2469434 lBF = `-0.0402043` Chr`18` : `67,544,046`	0.000	1.000	0.000
rs11082671 lBF = `-0.0457476` Chr`18` : `45,865,597`	0.000	1.000	0.000
rs60705247 lBF = `7.77481` Chr`18` : `54,741,103`	0.000	1.000	0.000
rs4372758 lBF = `5.5759` Chr`18` : `50,683,306`	0.000	1.000	0.000
rs1187256 lBF = `1.91798` Chr`18` : `35,295,330`	0.000	1.000	0.000
rs763361 lBF = `0.464979` Chr`18` : `67,531,642`	0.000	1.000	0.000
rs1187264 lBF = `0.165543` Chr`18` : `35,289,647`	0.000	1.000	0.000
rs2187375 lBF = `0.0745483` Chr`18` : `47,172,283`	0.000	1.000	0.000
rs10469266 lBF = `-0.00354442` Chr`18` : `62,169,092`	0.000	1.000	0.000
rs13381277 lBF = `-0.00572016` Chr`18` : `74,318,610`	0.000	1.000	0.000
rs4534959 lBF = `-0.0114045` Chr`18` : `61,877,156`	0.000	1.000	0.000
rs77990856 lBF = `-0.0225233` Chr`18` : `48,016,887`	0.000	1.000	0.000
rs9959259 lBF = `-0.0831793` Chr`18` : `73,549,963`	0.000	1.000	0.000
rs73951098 lBF = `16.0578` Chr`18` : `27,470,942`	0.000	1.000	0.000
rs117504245 lBF = `13.128` Chr`18` : `32,214,484`	0.000	1.000	0.000
rs185549704 lBF = `0.0363675` Chr`18` : `69,287,950`	0.000	1.000	0.000
rs9953769 lBF = `0.0267593` Chr`18` : `71,021,568`	0.000	1.000	0.000
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rs12970134 lBF = `8.45951` Chr`18` : `57,884,750`	0.000	1.000	0.000
rs117772358 lBF = `7.09414` Chr`18` : `42,348,576`	0.000	1.000	0.000
rs56308049 lBF = `5.33128` Chr`18` : `27,976,836`	0.000	1.000	0.000
rs62100765 lBF = `5.27252` Chr`18` : `50,735,418`	0.000	1.000	0.000
rs489693 lBF = `3.18069` Chr`18` : `57,882,787`	0.000	1.000	0.000
rs150664883 lBF = `0.43826` Chr`18` : `35,146,206`	0.000	1.000	0.000
rs4800353 lBF = `0.237395` Chr`18` : `19,654,137`	0.000	1.000	0.000
rs2660917 lBF = `0.143926` Chr`18` : `68,628,078`	0.000	1.000	0.000
rs8092234 lBF = `0.133484` Chr`18` : `9,371,333`	0.000	1.000	0.000
rs2111836 lBF = `0.0817147` Chr`18` : `8,716,321`	0.000	1.000	0.000
rs11661856 lBF = `0.0453669` Chr`18` : `75,653,523`	0.000	1.000	0.000
rs17086172 lBF = `0.0126079` Chr`18` : `70,227,021`	0.000	1.000	0.000
rs6565887 lBF = `0.00863623` Chr`18` : `74,182,975`	0.000	1.000	0.000
rs1826508 lBF = `0.0032493` Chr`18` : `1,206,984`	0.000	1.000	0.000
rs16950303 lBF = `-0.00279929` Chr`18` : `46,582,359`	0.000	1.000	0.000
rs4799088 lBF = `-0.0108338` Chr`18` : `77,573,548`	0.000	1.000	0.000
rs56775891 lBF = `-0.0160958` Chr`18` : `77,575,613`	0.000	1.000	0.000
rs1557351 lBF = `-0.0170027` Chr`18` : `54,752,314`	0.000	1.000	0.000
rs8089099 lBF = `-0.0257521` Chr`18` : `10,078,071`	0.000	1.000	0.000
rs7226677 lBF = `-0.0311434` Chr`18` : `278,796`	0.000	1.000	0.000
rs12455924 lBF = `-0.0341717` Chr`18` : `11,064,409`	0.000	1.000	0.000
rs1120787 lBF = `-0.0384799` Chr`18` : `54,983,554`	0.000	1.000	0.000
rs72934570 lBF = `-0.0440825` Chr`18` : `53,533,189`	0.000	1.000	0.000
rs473976 lBF = `-0.0567698` Chr`18` : `40,418,431`	0.000	1.000	0.000
rs7228085 lBF = `-0.0640051` Chr`18` : `47,160,814`	0.000	1.000	0.000
rs527616 lBF = `-0.0720427` Chr`18` : `24,337,424`	0.000	1.000	0.000
rs79685532 lBF = `10.6212` Chr`18` : `77,725,683`	0.000	1.000	0.000
rs41452747 lBF = `6.20014` Chr`18` : `52,918,380`	0.000	1.000	0.000
rs118027503 lBF = `5.17072` Chr`18` : `77,687,518`	0.000	1.000	0.000
rs16958440 lBF = `2.3429` Chr`18` : `44,632,884`	0.000	1.000	0.000
rs16958432 lBF = `2.3429` Chr`18` : `44,631,773`	0.000	1.000	0.000
rs12956009 lBF = `1.37696` Chr`18` : `44,768,024`	0.000	1.000	0.000
rs16949825 lBF = `0.945855` Chr`18` : `46,227,444`	0.000	1.000	0.000
rs7243357 lBF = `0.412815` Chr`18` : `56,883,319`	0.000	1.000	0.000
rs11082438 lBF = `0.212302` Chr`18` : `42,865,210`	0.000	1.000	0.000
rs7506840 lBF = `0.11647` Chr`18` : `6,522,756`	0.000	1.000	0.000
rs12607903 lBF = `0.0606153` Chr`18` : `3,817,134`	0.000	1.000	0.000
rs7506045 lBF = `0.0511143` Chr`18` : `11,987,272`	0.000	1.000	0.000
rs9952762 lBF = `0.0275078` Chr`18` : `73,401,650`	0.000	1.000	0.000
rs17651157 lBF = `0.0272524` Chr`18` : `34,107,452`	0.000	1.000	0.000
rs8093763 lBF = `0.0196925` Chr`18` : `57,503,378`	0.000	1.000	0.000
rs11875185 lBF = `0.0153574` Chr`18` : `55,627,840`	0.000	1.000	0.000
rs2639990 lBF = `0.00060051` Chr`18` : `72,915,551`	0.000	1.000	0.000
rs7505290 lBF = `-0.0327581` Chr`18` : `74,183,562`	0.000	1.000	0.000
rs12605822 lBF = `-0.0419833` Chr`18` : `9,296,524`	0.000	1.000	0.000
rs681383 lBF = `-0.0461021` Chr`18` : `8,323,984`	0.000	1.000	0.000
rs7240777 lBF = `-0.0482661` Chr`18` : `71,167,752`	0.000	1.000	0.000
rs12454023 lBF = `-0.0648155` Chr`18` : `56,009,604`	0.000	1.000	0.000
rs1942771 lBF = `-0.0671424` Chr`18` : `71,211,745`	0.000	1.000	0.000
rs9963862 lBF = `-0.0724579` Chr`18` : `20,587,911`	0.000	1.000	0.000
rs2920001 lBF = `-0.0767493` Chr`18` : `28,789,725`	0.000	1.000	0.000
rs7237497 lBF = `11.9138` Chr`18` : `12,777,325`	0.000	1.000	0.000
rs11876140 lBF = `5.99029` Chr`18` : `44,510,156`	0.000	1.000	0.000
rs77753228 lBF = `5.4503` Chr`18` : `41,134,775`	0.000	1.000	0.000
rs113285159 lBF = `5.01196` Chr`18` : `40,971,984`	0.000	1.000	0.000
rs79588679 lBF = `2.93535` Chr`18` : `19,907,770`	0.000	1.000	0.000
rs7229639 lBF = `1.53483` Chr`18` : `46,450,976`	0.000	1.000	0.000
rs62103177 lBF = `1.05415` Chr`18` : `77,624,479`	0.000	1.000	0.000
rs8092503 lBF = `0.672041` Chr`18` : `52,479,487`	0.000	1.000	0.000
rs7235840 lBF = `0.173722` Chr`18` : `73,725,200`	0.000	1.000	0.000
rs7231996 lBF = `0.139196` Chr`18` : `71,266,519`	0.000	1.000	0.000
rs4130047 lBF = `0.12744` Chr`18` : `40,678,235`	0.000	1.000	0.000
rs12458130 lBF = `0.124301` Chr`18` : `8,667,061`	0.000	1.000	0.000
rs1787200 lBF = `0.113827` Chr`18` : `46,587,654`	0.000	1.000	0.000
rs12456492 lBF = `0.0943272` Chr`18` : `40,673,380`	0.000	1.000	0.000
rs12959200 lBF = `0.0912698` Chr`18` : `71,267,054`	0.000	1.000	0.000
rs9952641 lBF = `0.0229198` Chr`18` : `318,040`	0.000	1.000	0.000
rs2217560 lBF = `0.0078309` Chr`18` : `70,150,939`	0.000	1.000	0.000
rs12456021 lBF = `0.00182836` Chr`18` : `56,213,390`	0.000	1.000	0.000
rs3794924 lBF = `-0.0125339` Chr`18` : `29,041,734`	0.000	1.000	0.000
rs62096106 lBF = `-0.0161061` Chr`18` : `59,838,919`	0.000	1.000	0.000
rs12954803 lBF = `-0.0219224` Chr`18` : `22,136,569`	0.000	1.000	0.000
rs275856 lBF = `-0.0230627` Chr`18` : `21,839,152`	0.000	1.000	0.000
rs2049186 lBF = `-0.0288966` Chr`18` : `32,015,228`	0.000	1.000	0.000
rs12185468 lBF = `-0.0310759` Chr`18` : `8,479,685`	0.000	1.000	0.000
rs11082321 lBF = `-0.0346267` Chr`18` : `20,776,651`	0.000	1.000	0.000
rs1619249 lBF = `-0.0439138` Chr`18` : `49,190,644`	0.000	1.000	0.000
rs715170 lBF = `-0.0458681` Chr`18` : `53,795,514`	0.000	1.000	0.000
rs7226408 lBF = `-0.0493902` Chr`18` : `34,371,861`	0.000	1.000	0.000
rs8092443 lBF = `-0.0494088` Chr`18` : `68,142,414`	0.000	1.000	0.000
rs11663206 lBF = `-0.05517` Chr`18` : `68,153,620`	0.000	1.000	0.000
rs4570936 lBF = `-0.0617298` Chr`18` : `36,738,196`	0.000	1.000	0.000
rs8089250 lBF = `-0.0638926` Chr`18` : `4,772,807`	0.000	1.000	0.000
rs12456874 lBF = `-0.0687189` Chr`18` : `13,366,862`	0.000	1.000	0.000
rs12959570 lBF = `-0.0687857` Chr`18` : `54,333,584`	0.000	1.000	0.000
rs2162440 lBF = `-0.070034` Chr`18` : `35,214,006`	0.000	1.000	0.000
rs4797996 lBF = `-0.0742342` Chr`18` : `2,507,425`	0.000	1.000	0.000
rs9964595 lBF = `-0.079206` Chr`18` : `1,807,674`	0.000	1.000	0.000
rs7227483 lBF = `-0.0802931` Chr`18` : `43,187,130`	0.000	1.000	0.000
rs1876449 lBF = `-0.0931902` Chr`18` : `1,471,413`	0.000	1.000	0.000
rs6506122 lBF = `-0.104083` Chr`18` : `3,394,449`	0.000	1.000	0.000
rs35352860 lBF = `24.3441` Chr`18` : `46,453,754`	0.000	1.000	0.000
rs75518588 lBF = `6.17381` Chr`18` : `46,400,784`	0.000	1.000	0.000
rs62096462 lBF = `5.38029` Chr`18` : `44,625,179`	0.000	1.000	0.000
rs7240392 lBF = `5.36543` Chr`18` : `43,198,141`	0.000	1.000	0.000
rs73435406 lBF = `5.06374` Chr`18` : `46,440,764`	0.000	1.000	0.000
rs1631486 lBF = `4.08365` Chr`18` : `53,026,357`	0.000	1.000	0.000
rs12606068 lBF = `1.37012` Chr`18` : `65,191,491`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0173

log Bayes Factor = 654.164

contains 9 variants

0.1086

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.9987

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.9948

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.9938

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.9926

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.9844

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.9766

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.9751

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.9743

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.9433

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.9387

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.9360

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9290

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.9204

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.9161

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9088

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.8969

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.8893

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.8852

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.8751

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.8678

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.8634

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.8490

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.8485

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.7908

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.7679

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.7471

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.7273

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.7164

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.7162

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.6248

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.5919

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.5902

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.5881

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.5866

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.5856

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.5603

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.5278

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.4438

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.4409

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.4091

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.3930

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.3713

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.3392

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.2846

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2153

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2024

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.1334

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.1289

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0763

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0646

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.0581

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	N80-N98 Noninflammatory disorders of female genital tract
Nested terms	N89.0 Mild vaginal dysplasia N89.1 Moderate vaginal dysplasia N89.2 Severe vaginal dysplasia, not elsewhere classified N89.3 Dysplasia of vagina, unspecified N89.4 Leukoplakia of vagina N89.5 Stricture and atresia of vagina N89.6 Tight hymenal ring N89.7 Haematocolpos N89.8 Other specified noninflammatory disorders of vagina N89.9 Noninflammatory disorder of vagina, unspecified

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)