TreeWAS – [N82.0] Vesicovaginal fistula

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs117437287 lBF = `16.5299` Chr`12` : `23,389,839`	0.557	0.443	0.000
rs117929870 lBF = `16.9839` Chr`12` : `108,524,849`	0.539	0.460	0.000
rs61756485 lBF = `16.787` Chr`12` : `99,020,125`	0.524	0.476	0.000
rs117605016 lBF = `28.0976` Chr`12` : `129,614,385`	0.513	0.486	0.000
rs144700679 lBF = `7.09223` Chr`12` : `115,468,959`	0.512	0.488	0.000
rs34574480 lBF = `13.3586` Chr`12` : `115,307,567`	0.512	0.488	0.000
rs2279695 lBF = `6.13321` Chr`12` : `117,154,262`	0.508	0.491	0.000
rs78221103 lBF = `16.6479` Chr`12` : `104,562,673`	0.508	0.492	0.000
rs117091826 lBF = `24.5799` Chr`12` : `112,629,713`	0.506	0.493	0.000
rs5742692 lBF = `2.17819` Chr`12` : `102,799,598`	0.506	0.494	0.000
rs215398 lBF = `19.4313` Chr`12` : `47,767,134`	0.502	0.498	0.000
rs79680354 lBF = `22.0763` Chr`12` : `119,361,070`	0.500	0.500	0.000
rs117139804 lBF = `18.4888` Chr`12` : `116,233,671`	0.495	0.505	0.000
rs73141422 lBF = `22.399` Chr`12` : `83,882,469`	0.491	0.509	0.000
rs17102257 lBF = `14.6206` Chr`12` : `54,126,061`	0.481	0.518	0.000
rs188610 lBF = `2.31323` Chr`12` : `313,839`	0.467	0.532	0.000
rs143136847 lBF = `1.54314` Chr`12` : `82,748,339`	0.458	0.542	0.000
rs181609621 lBF = `1.56948` Chr`12` : `32,810,759`	0.453	0.547	0.000
rs2292303 lBF = `0.924716` Chr`12` : `102,513,531`	0.452	0.548	0.000
rs2417373 lBF = `14.5305` Chr`12` : `14,744,468`	0.447	0.552	0.000
rs1291621 lBF = `15.6995` Chr`12` : `46,340,821`	0.416	0.583	0.000
rs74910874 lBF = `2.61067` Chr`12` : `67,086,810`	0.414	0.585	0.000
rs182057829 lBF = `2.49683` Chr`12` : `97,412,327`	0.394	0.606	0.000
rs6580622 lBF = `15.5075` Chr`12` : `47,936,778`	0.390	0.610	0.000
rs77821460 lBF = `20.1742` Chr`12` : `20,274,936`	0.377	0.623	0.000
rs149104283 lBF = `2.00778` Chr`12` : `21,083,862`	0.367	0.633	0.000
rs12582659 lBF = `4.82974` Chr`12` : `76,064,528`	0.346	0.654	0.000
rs117492744 lBF = `13.2788` Chr`12` : `29,747,631`	0.342	0.657	0.000
rs12425131 lBF = `16.2355` Chr`12` : `82,984,879`	0.340	0.660	0.000
rs117636037 lBF = `18.8537` Chr`12` : `38,519,375`	0.336	0.664	0.000
rs118079879 lBF = `5.09035` Chr`12` : `41,713,306`	0.336	0.664	0.000
rs112742247 lBF = `13.3959` Chr`12` : `85,030,619`	0.320	0.680	0.000
rs75311705 lBF = `0.456159` Chr`12` : `125,714,596`	0.295	0.704	0.000
rs78008978 lBF = `13.3787` Chr`12` : `77,282,680`	0.294	0.706	0.000
rs5744807 lBF = `13.1175` Chr`12` : `133,243,621`	0.263	0.737	0.000
rs3809128 lBF = `2.10909` Chr`12` : `56,709,919`	0.253	0.746	0.000
rs76409154 lBF = `20.1612` Chr`12` : `85,692,134`	0.230	0.770	0.000
rs114453043 lBF = `22.0948` Chr`12` : `25,461,756`	0.218	0.782	0.000
rs11175593 lBF = `2.45774` Chr`12` : `40,601,940`	0.203	0.796	0.000
rs7307123 lBF = `21.9581` Chr`12` : `54,524,397`	0.202	0.798	0.000
rs4149639 lBF = `0.234732` Chr`12` : `6,442,001`	0.201	0.799	0.000
rs7294372 lBF = `0.932637` Chr`12` : `114,637,423`	0.186	0.813	0.000
rs3794288 lBF = `0.216509` Chr`12` : `2,789,221`	0.185	0.815	0.000
rs76796201 lBF = `14.1948` Chr`12` : `23,091,755`	0.179	0.820	0.000
rs78851502 lBF = `8.34221` Chr`12` : `40,811,944`	0.126	0.874	0.000
rs73217910 lBF = `14.853` Chr`12` : `118,450,865`	0.114	0.886	0.000
rs117863495 lBF = `14.7593` Chr`12` : `129,432,374`	0.110	0.890	0.000
rs76242156 lBF = `19.5711` Chr`12` : `65,043,774`	0.108	0.891	0.000
rs10506821 lBF = `13.2804` Chr`12` : `80,496,923`	0.094	0.906	0.000
rs11115322 lBF = `13.8059` Chr`12` : `83,019,188`	0.091	0.909	0.000
rs116938548 lBF = `0.178688` Chr`12` : `4,808,251`	0.088	0.912	0.000
rs141480969 lBF = `0.733874` Chr`12` : `62,496,278`	0.082	0.918	0.000
rs144288546 lBF = `0.146461` Chr`12` : `129,069,682`	0.081	0.919	0.000
rs12371484 lBF = `19.7008` Chr`12` : `111,872,722`	0.078	0.922	0.000
rs117629949 lBF = `14.77` Chr`12` : `25,021,224`	0.077	0.923	0.000
rs12370770 lBF = `24.384` Chr`12` : `112,277,084`	0.077	0.923	0.000
rs74911677 lBF = `20.5271` Chr`12` : `122,015,993`	0.076	0.924	0.000
rs55783344 lBF = `0.0642843` Chr`12` : `121,432,299`	0.075	0.925	0.000
rs79918060 lBF = `17.5524` Chr`12` : `58,407,669`	0.068	0.932	0.000
rs78294386 lBF = `14.58` Chr`12` : `107,963,652`	0.066	0.934	0.000
rs12422544 lBF = `1.68441` Chr`12` : `40,528,432`	0.066	0.934	0.000
rs117624816 lBF = `14.1981` Chr`12` : `18,210,143`	0.066	0.934	0.000
rs79015790 lBF = `14.8688` Chr`12` : `128,700,249`	0.064	0.935	0.000
rs78321382 lBF = `14.0322` Chr`12` : `17,070,922`	0.048	0.952	0.000
rs17813263 lBF = `23.117` Chr`12` : `69,481,381`	0.048	0.952	0.000
rs76001134 lBF = `19.3411` Chr`12` : `23,209,903`	0.045	0.955	0.000
rs9332958 lBF = `5.25634` Chr`12` : `16,519,263`	0.042	0.958	0.000
rs73164250 lBF = `17.0593` Chr`12` : `84,624,334`	0.040	0.960	0.000
rs16906714 lBF = `0.0571485` Chr`12` : `30,860,557`	0.039	0.960	0.000
rs35729753 lBF = `17.3029` Chr`12` : `66,672,379`	0.036	0.964	0.000
rs12322695 lBF = `0.0399753` Chr`12` : `117,199,414`	0.034	0.966	0.000
rs189010983 lBF = `0.0387565` Chr`12` : `84,086,176`	0.029	0.971	0.000
rs2608700 lBF = `16.0704` Chr`12` : `41,884,414`	0.027	0.972	0.000
rs199710891 lBF = `5.87106` Chr`12` : `14,273,071`	0.025	0.975	0.000
rs73313995 lBF = `22.0276` Chr`12` : `33,622,807`	0.024	0.976	0.000
rs80002652 lBF = `18.6612` Chr`12` : `107,437,422`	0.022	0.977	0.000
rs188255132 lBF = `0.0230843` Chr`12` : `81,723,188`	0.021	0.978	0.000
rs4238083 lBF = `14.8083` Chr`12` : `42,924,769`	0.020	0.980	0.000
rs80160299 lBF = `15.0308` Chr`12` : `66,159,224`	0.020	0.980	0.000
rs117409850 lBF = `13.4266` Chr`12` : `106,057,582`	0.020	0.980	0.000
rs183825572 lBF = `0.0255777` Chr`12` : `101,264,845`	0.019	0.980	0.000
rs75626916 lBF = `11.7941` Chr`12` : `108,663,870`	0.018	0.982	0.000
rs144148493 lBF = `0.015726` Chr`12` : `87,360,221`	0.017	0.982	0.000
rs73201485 lBF = `11.279` Chr`12` : `114,791,319`	0.016	0.984	0.000
rs11180992 lBF = `0.0137073` Chr`12` : `41,940,664`	0.015	0.985	0.000
rs77628219 lBF = `0.0129624` Chr`12` : `87,404,130`	0.015	0.985	0.000
rs187039407 lBF = `0.0120709` Chr`12` : `87,341,774`	0.015	0.985	0.000
rs117761474 lBF = `15.8826` Chr`12` : `113,029,356`	0.014	0.986	0.000
rs80132640 lBF = `11.0963` Chr`12` : `49,426,460`	0.014	0.986	0.000
rs75289085 lBF = `19.4964` Chr`12` : `18,147,653`	0.012	0.988	0.000
rs11044722 lBF = `15.4222` Chr`12` : `19,781,710`	0.012	0.988	0.000
rs34934130 lBF = `11.9795` Chr`12` : `121,502,913`	0.011	0.988	0.000
rs77662038 lBF = `13.6756` Chr`12` : `83,497,229`	0.011	0.989	0.000
rs79476482 lBF = `14.9329` Chr`12` : `76,084,550`	0.011	0.989	0.000
rs142494129 lBF = `0.0386533` Chr`12` : `95,161,353`	0.010	0.990	0.000
rs4594074 lBF = `0.0140546` Chr`12` : `41,032,092`	0.010	0.990	0.000
rs1235153 lBF = `9.04692` Chr`12` : `48,110,325`	0.010	0.990	0.000
rs11611673 lBF = `13.5862` Chr`12` : `121,451,150`	0.010	0.990	0.000
rs11564258 lBF = `0.0464349` Chr`12` : `40,792,300`	0.009	0.990	0.000
rs76859191 lBF = `0.57087` Chr`12` : `114,545,274`	0.009	0.991	0.000
rs187293782 lBF = `0.0145963` Chr`12` : `76,157,356`	0.008	0.992	0.000
rs17443266 lBF = `15.2354` Chr`12` : `19,169,453`	0.008	0.992	0.000
rs1388585 lBF = `0.675794` Chr`12` : `40,531,691`	0.000	0.992	0.007
rs187035304 lBF = `0.00715419` Chr`12` : `87,229,742`	0.007	0.992	0.000
rs139236384 lBF = `0.00601029` Chr`12` : `82,550,025`	0.007	0.992	0.000
rs117802803 lBF = `21.4181` Chr`12` : `22,796,804`	0.000	0.992	0.007
rs11608709 lBF = `15.4681` Chr`12` : `99,302,859`	0.007	0.993	0.000
rs2722223 lBF = `24.9818` Chr`12` : `90,233,876`	0.007	0.993	0.000
rs10506418 lBF = `0.0272495` Chr`12` : `61,488,772`	0.006	0.993	0.000
rs118113273 lBF = `22.5923` Chr`12` : `128,300,100`	0.006	0.993	0.000
rs117303215 lBF = `9.21583` Chr`12` : `129,627,812`	0.006	0.993	0.000
rs73040424 lBF = `7.46879` Chr`12` : `5,665,454`	0.006	0.994	0.000
rs116877397 lBF = `30.7668` Chr`12` : `121,162,996`	0.005	0.994	0.000
rs17432871 lBF = `6.59959` Chr`12` : `121,542,128`	0.006	0.994	0.000
rs11108227 lBF = `16.4201` Chr`12` : `96,134,001`	0.005	0.994	0.000
rs183244340 lBF = `0.0050197` Chr`12` : `87,005,576`	0.005	0.995	0.000
rs117029533 lBF = `21.9889` Chr`12` : `66,632,067`	0.005	0.995	0.000
rs74565952 lBF = `16.1651` Chr`12` : `71,112,797`	0.005	0.995	0.000
rs12423247 lBF = `0.921356` Chr`12` : `96,858,362`	0.005	0.995	0.000
rs17126180 lBF = `0.00493889` Chr`12` : `52,263,956`	0.000	0.996	0.004
rs12321507 lBF = `16.2879` Chr`12` : `96,134,818`	0.004	0.996	0.000
rs76582905 lBF = `0.00276703` Chr`12` : `130,466,631`	0.004	0.996	0.000
rs7307889 lBF = `7.08994` Chr`12` : `5,981,353`	0.004	0.996	0.000
rs187353341 lBF = `19.0434` Chr`12` : `121,557,376`	0.004	0.996	0.000
rs11065791 lBF = `12.9532` Chr`12` : `111,460,000`	0.004	0.996	0.000
rs183032784 lBF = `0.00474184` Chr`12` : `118,257,214`	0.004	0.996	0.000
rs10862476 lBF = `-0.121784` Chr`12` : `77,133,805`	0.000	0.996	0.004
rs55922880 lBF = `0.00435799` Chr`12` : `115,617,641`	0.004	0.996	0.000
rs7961581 lBF = `-0.0213352` Chr`12` : `71,663,102`	0.000	0.996	0.004
rs59753639 lBF = `4.25806` Chr`12` : `25,140,690`	0.003	0.996	0.000
rs3951439 lBF = `0.0044521` Chr`12` : `51,727,596`	0.000	0.997	0.003
rs2733283 lBF = `17.1055` Chr`12` : `41,935,977`	0.003	0.997	0.000
rs76177788 lBF = `0.0120066` Chr`12` : `86,544,239`	0.003	0.997	0.000
rs10773971 lBF = `-0.0157233` Chr`12` : `1,740,171`	0.003	0.997	0.000
rs11171747 lBF = `-0.0681416` Chr`12` : `56,518,408`	0.003	0.997	0.000
rs1040026 lBF = `0.00233431` Chr`12` : `71,210,678`	0.003	0.997	0.000
rs941184 lBF = `0.00357459` Chr`12` : `54,114,158`	0.003	0.997	0.000
rs56360506 lBF = `10.2114` Chr`12` : `53,222,800`	0.002	0.997	0.000
rs1495377 lBF = `0.109341` Chr`12` : `71,577,101`	0.000	0.997	0.003
rs4760790 lBF = `-0.0177311` Chr`12` : `71,634,794`	0.000	0.997	0.003
rs7137521 lBF = `0.00252492` Chr`12` : `126,734,269`	0.002	0.997	0.000
rs183160876 lBF = `0.00279977` Chr`12` : `82,463,439`	0.002	0.997	0.000
rs7309269 lBF = `13.6679` Chr`12` : `7,757,834`	0.002	0.998	0.000
rs12230170 lBF = `6.64286` Chr`12` : `129,247,383`	0.002	0.998	0.000
rs76775795 lBF = `13.6666` Chr`12` : `115,385,431`	0.002	0.998	0.000
rs190909796 lBF = `0.00805551` Chr`12` : `80,474,682`	0.002	0.998	0.000
rs117458579 lBF = `15.4218` Chr`12` : `15,351,989`	0.002	0.998	0.000
rs73114523 lBF = `14.6366` Chr`12` : `54,602,032`	0.002	0.998	0.000
rs182328274 lBF = `0.0032004` Chr`12` : `107,667,802`	0.002	0.998	0.000
rs75876943 lBF = `15.0045` Chr`12` : `86,555,845`	0.002	0.998	0.000
rs115720202 lBF = `18.7627` Chr`12` : `89,746,581`	0.002	0.998	0.000
rs34637584 lBF = `0.00195999` Chr`12` : `40,734,202`	0.002	0.998	0.000
rs17466626 lBF = `0.0332799` Chr`12` : `40,760,631`	0.002	0.998	0.000
rs11609031 lBF = `16.3836` Chr`12` : `99,307,725`	0.002	0.998	0.000
rs12582852 lBF = `14.3759` Chr`12` : `3,315,933`	0.002	0.998	0.000
rs139660738 lBF = `0.00949875` Chr`12` : `95,185,188`	0.000	0.998	0.002
rs1520223 lBF = `0.00239145` Chr`12` : `102,726,338`	0.002	0.998	0.000
rs117626015 lBF = `0.00164872` Chr`12` : `41,624,795`	0.002	0.998	0.000
rs4149018 lBF = `0.00161931` Chr`12` : `21,291,561`	0.001	0.998	0.000
rs117759274 lBF = `14.7453` Chr`12` : `23,131,855`	0.002	0.998	0.000
rs142054194 lBF = `0.0063675` Chr`12` : `86,864,240`	0.002	0.998	0.000
rs181947843 lBF = `0.00335065` Chr`12` : `108,547,387`	0.001	0.998	0.000
rs17040357 lBF = `13.7026` Chr`12` : `108,665,316`	0.001	0.998	0.000
rs140444490 lBF = `0.00607512` Chr`12` : `86,860,976`	0.001	0.998	0.000
rs6489785 lBF = `-0.0856333` Chr`12` : `121,363,724`	0.002	0.998	0.000
rs1653608 lBF = `16.5227` Chr`12` : `121,706,733`	0.001	0.998	0.000
rs188024766 lBF = `0.00093228` Chr`12` : `101,353,534`	0.001	0.998	0.000
rs12813285 lBF = `22.3499` Chr`12` : `68,206,219`	0.001	0.998	0.000
rs76450399 lBF = `14.1937` Chr`12` : `9,143,781`	0.001	0.998	0.000
rs76270203 lBF = `1.90441` Chr`12` : `113,936,996`	0.001	0.998	0.000
rs10858945 lBF = `-0.0625343` Chr`12` : `90,443,482`	0.001	0.998	0.000
rs192256367 lBF = `0.00111823` Chr`12` : `107,648,405`	0.001	0.999	0.000
rs11837432 lBF = `16.9657` Chr`12` : `2,170,893`	0.001	0.999	0.000
rs186879571 lBF = `0.0106335` Chr`12` : `128,652,831`	0.001	0.999	0.000
rs10861337 lBF = `0.033449` Chr`12` : `105,452,442`	0.001	0.999	0.000
rs1131017 lBF = `8.6464` Chr`12` : `56,435,929`	0.001	0.999	0.000
rs76595471 lBF = `13.0273` Chr`12` : `80,228,443`	0.001	0.999	0.000
rs181697701 lBF = `0.00035088` Chr`12` : `107,611,050`	0.001	0.999	0.000
rs73045775 lBF = `23.3857` Chr`12` : `8,674,905`	0.001	0.999	0.000
rs77649004 lBF = `14.247` Chr`12` : `96,135,916`	0.001	0.999	0.000
rs499368 lBF = `-0.00108169` Chr`12` : `320,920`	0.001	0.999	0.000
rs79002142 lBF = `11.7979` Chr`12` : `85,143,591`	0.001	0.999	0.000
rs7971536 lBF = `0.151039` Chr`12` : `102,373,788`	0.001	0.999	0.000
rs184699315 lBF = `0.00049337` Chr`12` : `71,650,779`	0.001	0.999	0.000
rs10876864 lBF = `8.27878` Chr`12` : `56,401,085`	0.000	0.999	0.001
rs17287293 lBF = `0.905142` Chr`12` : `24,770,878`	0.001	0.999	0.000
rs1292011 lBF = `0.190486` Chr`12` : `115,836,522`	0.001	0.999	0.000
rs2014355 lBF = `0.133864` Chr`12` : `121,175,524`	0.001	0.999	0.000
rs3916 lBF = `0.117559` Chr`12` : `121,177,272`	0.001	0.999	0.000
rs140785266 lBF = `0.00305033` Chr`12` : `86,195,923`	0.001	0.999	0.000
rs17096606 lBF = `36.0164` Chr`12` : `38,532,743`	0.000	0.999	0.001
rs17356907 lBF = `8.47713` Chr`12` : `96,027,759`	0.001	0.999	0.000
rs7488011 lBF = `12.0453` Chr`12` : `9,925,336`	0.001	0.999	0.000
rs10861342 lBF = `0.0295379` Chr`12` : `105,458,797`	0.001	0.999	0.000
rs7974425 lBF = `0.00058097` Chr`12` : `60,735,173`	0.001	0.999	0.000
rs1386003 lBF = `12.5875` Chr`12` : `13,213,682`	0.001	0.999	0.000
rs2066938 lBF = `0.122999` Chr`12` : `121,160,615`	0.001	0.999	0.000
rs3229 lBF = `-0.0853924` Chr`12` : `42,475,888`	0.000	0.999	0.001
rs187986843 lBF = `15.061` Chr`12` : `69,080,770`	0.001	0.999	0.000
rs276000 lBF = `0.00046952` Chr`12` : `59,849,677`	0.001	0.999	0.000
rs2302729 lBF = `-0.0248168` Chr`12` : `2,783,972`	0.001	0.999	0.000
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Affx-8411664 lBF = `18.4862` Chr`12` : `71,094,955`	0.000	0.999	0.000
rs75593565 lBF = `13.6234` Chr`12` : `32,115,266`	0.000	0.999	0.000
rs1689510 lBF = `10.079` Chr`12` : `56,396,768`	0.000	0.999	0.001
rs4763879 lBF = `7.5082` Chr`12` : `9,910,164`	0.001	0.999	0.000
rs995030 lBF = `0.708423` Chr`12` : `88,890,671`	0.000	0.999	0.001
rs11104870 lBF = `0.110351` Chr`12` : `88,829,294`	0.000	0.999	0.001
rs9739682 lBF = `0.0684794` Chr`12` : `62,516,649`	0.000	0.999	0.000
rs9706154 lBF = `0.0619769` Chr`12` : `62,513,582`	0.000	0.999	0.000
rs1009168 lBF = `0.0473879` Chr`12` : `62,510,495`	0.000	0.999	0.000
rs9738122 lBF = `0.0447775` Chr`12` : `62,514,673`	0.000	0.999	0.000
rs1444249 lBF = `0.0395266` Chr`12` : `62,501,196`	0.000	0.999	0.000
rs9668865 lBF = `0.0381979` Chr`12` : `62,507,589`	0.000	0.999	0.000
rs35194524 lBF = `0.0381979` Chr`12` : `62,507,200`	0.000	0.999	0.000
rs12829595 lBF = `0.0381979` Chr`12` : `62,507,518`	0.000	0.999	0.000
rs11174324 lBF = `0.037943` Chr`12` : `62,502,250`	0.000	0.999	0.000
rs9668015 lBF = `0.0379098` Chr`12` : `62,506,495`	0.000	0.999	0.000
rs1975494 lBF = `0.0379098` Chr`12` : `62,508,197`	0.000	0.999	0.000
rs145861664 lBF = `0.0379098` Chr`12` : `62,505,458`	0.000	0.999	0.000
rs1985875 lBF = `0.0379098` Chr`12` : `62,508,024`	0.000	0.999	0.000
rs9738294 lBF = `0.0379098` Chr`12` : `62,508,489`	0.000	0.999	0.000
rs9739546 lBF = `0.0378782` Chr`12` : `62,508,437`	0.000	0.999	0.000
rs12579846 lBF = `0.0352511` Chr`12` : `62,509,328`	0.000	0.999	0.000
rs10877792 lBF = `0.0340903` Chr`12` : `62,503,621`	0.000	0.999	0.000
rs9668676 lBF = `0.03392` Chr`12` : `62,504,199`	0.000	0.999	0.000
rs11174325 lBF = `0.03392` Chr`12` : `62,503,773`	0.000	0.999	0.000
rs9668369 lBF = `0.0338669` Chr`12` : `62,506,842`	0.000	0.999	0.000
rs12425896 lBF = `0.0338669` Chr`12` : `62,506,902`	0.000	0.999	0.000
rs10784281 lBF = `0.0223776` Chr`12` : `62,502,979`	0.000	0.999	0.000
rs143888465 lBF = `0.00254406` Chr`12` : `52,010,108`	0.000	0.999	0.000
rs871257 lBF = `-0.0404592` Chr`12` : `117,994,348`	0.000	0.999	0.000
rs7301016 lBF = `-0.0493217` Chr`12` : `62,886,123`	0.001	0.999	0.000
rs4760636 lBF = `-0.0548218` Chr`12` : `48,173,352`	0.001	0.999	0.000
rs17653722 lBF = `-0.055572` Chr`12` : `52,587,518`	0.001	0.999	0.000
rs10785571 lBF = `-0.0724604` Chr`12` : `45,726,615`	0.001	0.999	0.000
rs11174267 lBF = `-0.113046` Chr`12` : `62,386,600`	0.000	0.999	0.001
rs12815303 lBF = `-0.113448` Chr`12` : `62,387,183`	0.000	0.999	0.001
rs12817007 lBF = `-0.114843` Chr`12` : `62,387,282`	0.000	0.999	0.001
rs12817011 lBF = `-0.115072` Chr`12` : `62,387,287`	0.000	0.999	0.001
rs303795 lBF = `-0.115491` Chr`12` : `52,245,938`	0.001	0.999	0.000
rs117089640 lBF = `23.0292` Chr`12` : `125,048,557`	0.000	0.999	0.000
rs35587409 lBF = `12.2827` Chr`12` : `100,841,306`	0.000	0.999	0.000
rs112979434 lBF = `9.23181` Chr`12` : `9,885,707`	0.000	0.999	0.001
rs7297186 lBF = `6.68652` Chr`12` : `111,778,178`	0.000	0.999	0.000
rs11044946 lBF = `0.0504246` Chr`12` : `20,081,335`	0.000	0.999	0.000
rs10774021 lBF = `-0.0190185` Chr`12` : `349,298`	0.001	0.999	0.000
rs2887571 lBF = `-0.0393338` Chr`12` : `1,638,171`	0.000	0.999	0.000
rs614226 lBF = `-0.0412855` Chr`12` : `120,974,510`	0.001	0.999	0.000
rs1265566 lBF = `13.2222` Chr`12` : `111,716,376`	0.001	0.999	0.000
rs10774613 lBF = `10.8225` Chr`12` : `111,546,165`	0.000	0.999	0.001
rs12304534 lBF = `8.83589` Chr`12` : `89,683,643`	0.000	0.999	0.000
rs705702 lBF = `8.34208` Chr`12` : `56,390,636`	0.000	0.999	0.000
rs7305482 lBF = `8.02751` Chr`12` : `62,582,231`	0.000	0.999	0.000
rs35220816 lBF = `7.31535` Chr`12` : `115,082,017`	0.000	0.999	0.000
rs877636 lBF = `5.92485` Chr`12` : `56,480,583`	0.000	0.999	0.000
rs111969502 lBF = `5.3967` Chr`12` : `59,848,381`	0.000	0.999	0.000
rs902774 lBF = `1.63621` Chr`12` : `53,273,904`	0.000	0.999	0.000
rs258415 lBF = `1.25111` Chr`12` : `28,017,522`	0.000	0.999	0.000
rs7953528 lBF = `1.1414` Chr`12` : `28,017,159`	0.000	0.999	0.000
rs3782181 lBF = `0.616058` Chr`12` : `88,953,561`	0.000	0.999	0.001
rs11047102 lBF = `0.427704` Chr`12` : `23,946,146`	0.000	0.999	0.000
rs899435 lBF = `0.325597` Chr`12` : `13,452,780`	0.000	0.999	0.001
rs7301826 lBF = `0.109702` Chr`12` : `131,291,101`	0.000	0.999	0.001
rs7975752 lBF = `0.0834701` Chr`12` : `116,154,654`	0.000	0.999	0.001
rs11104268 lBF = `0.0582113` Chr`12` : `76,627,445`	0.000	0.999	0.000
rs1187415 lBF = `0.0452157` Chr`12` : `124,491,529`	0.001	0.999	0.000
rs1444250 lBF = `0.0341945` Chr`12` : `62,501,174`	0.000	0.999	0.000
rs12282 lBF = `0.00394501` Chr`12` : `133,345,809`	0.000	0.999	0.000
rs12321565 lBF = `0.00259808` Chr`12` : `68,532,077`	0.000	0.999	0.000
rs12321906 lBF = `-0.00389599` Chr`12` : `53,916,715`	0.000	0.999	0.000
rs11062102 lBF = `-0.0215623` Chr`12` : `348,785`	0.001	0.999	0.000
rs11049611 lBF = `-0.0625499` Chr`12` : `28,600,244`	0.001	0.999	0.000
rs2122661 lBF = `-0.106534` Chr`12` : `98,024,655`	0.000	0.999	0.001
rs1265565 lBF = `23.6926` Chr`12` : `111,715,197`	0.000	0.999	0.001
rs4378452 lBF = `20.7259` Chr`12` : `111,504,033`	0.000	0.999	0.000
rs117825839 lBF = `16.5381` Chr`12` : `28,978,196`	0.000	0.999	0.000
rs10774740 lBF = `10.5603` Chr`12` : `114,666,202`	0.000	0.999	0.000
rs73110464 lBF = `4.11756` Chr`12` : `53,312,612`	0.000	0.999	0.000
rs4474514 lBF = `0.605549` Chr`12` : `88,953,959`	0.000	0.999	0.000
rs1153188 lBF = `0.190285` Chr`12` : `55,098,996`	0.001	0.999	0.000
rs258401 lBF = `0.0568533` Chr`12` : `28,008,769`	0.000	0.999	0.000
rs150695384 lBF = `0.0114384` Chr`12` : `64,917,042`	0.000	0.999	0.000
rs11062578 lBF = `0.00505306` Chr`12` : `3,327,167`	0.000	0.999	0.000
rs4761974 lBF = `0.00489477` Chr`12` : `51,880,445`	0.000	0.999	0.000
rs11175944 lBF = `0.00425637` Chr`12` : `66,256,395`	0.000	0.999	0.000
rs1882496 lBF = `-0.00032723` Chr`12` : `104,900,584`	0.000	0.999	0.000
rs36104021 lBF = `-0.0330342` Chr`12` : `103,361,112`	0.000	0.999	0.000
rs2403106 lBF = `-0.0508285` Chr`12` : `84,008,275`	0.000	0.999	0.000
rs2252518 lBF = `-0.0545461` Chr`12` : `52,381,026`	0.000	0.999	0.000
rs1348582 lBF = `-0.0547663` Chr`12` : `20,531,756`	0.000	0.999	0.000
rs11115148 lBF = `-0.0616645` Chr`12` : `82,389,124`	0.000	0.999	0.000
rs1391708 lBF = `-0.0625441` Chr`12` : `57,305,580`	0.000	0.999	0.000
rs79235855 lBF = `16.45` Chr`12` : `1,537,749`	0.000	0.999	0.000
rs117138325 lBF = `14.5458` Chr`12` : `74,850,188`	0.000	0.999	0.000
rs1528287 lBF = `13.6349` Chr`12` : `80,985,872`	0.000	0.999	0.000
rs4766986 lBF = `8.99695` Chr`12` : `113,076,475`	0.000	0.999	0.000
rs2292239 lBF = `5.37127` Chr`12` : `56,482,180`	0.000	0.999	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.8757

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.8265

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.6807

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.6649

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.6604

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.6524

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.6148

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.6051

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.6027

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.5937

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.5910

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.5866

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.5777

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.5709

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.5687

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.5659

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.5579

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.5444

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.5251

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.5169

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.5140

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.5140

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.5140

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.5140

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.5140

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.5140

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.5140

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.5139

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.5130

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.4993

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.4899

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.4817

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.4800

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.4757

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.4755

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.3956

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.3872

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.3596

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.3441

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.3402

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.2510

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.2176

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.2159

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.2063

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.1810

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.1567

Cluster X0141

log Bayes Factor = 742.063

contains 30 variants

0.1258

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0940

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.0790

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.0697

Cluster X0263

log Bayes Factor = 240.36

contains 13 variants

0.0528

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)