TreeWAS – Bacterial infection

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs2040406 lBF = `357.929` Chr`6` : `32,603,007`	0.980	0.020	0.000
rs9263739 lBF = `60.3753` Chr`6` : `31,111,356`	0.000	0.025	0.975
rs3129763 lBF = `356.287` Chr`6` : `32,590,925`	0.975	0.025	0.000
rs111945767 lBF = `280.978` Chr`6` : `32,517,045`	0.954	0.046	0.000
rs3130618 lBF = `275.803` Chr`6` : `31,632,134`	0.948	0.052	0.000
rs2161277 lBF = `6.99125` Chr`5` : `62,866,262`	0.000	0.053	0.947
rs9267119 lBF = `74.6145` Chr`6` : `31,424,585`	0.000	0.054	0.946
rs9272729 lBF = `358.144` Chr`6` : `32,609,594`	0.943	0.057	0.000
rs3115663 lBF = `274.955` Chr`6` : `31,601,843`	0.936	0.064	0.000
rs2187668 lBF = `358.549` Chr`6` : `32,605,884`	0.919	0.081	0.000
rs9272535 lBF = `364.218` Chr`6` : `32,606,756`	0.913	0.087	0.000
rs1265112 lBF = `309.035` Chr`6` : `31,118,019`	0.913	0.087	0.000
rs1980493 lBF = `289.303` Chr`6` : `32,363,215`	0.903	0.097	0.000
rs3094548 lBF = `83.4685` Chr`6` : `29,355,202`	0.000	0.102	0.898
rs2858884 lBF = `75.146` Chr`6` : `32,700,083`	0.891	0.109	0.000
rs3095267 lBF = `127.274` Chr`6` : `29,607,046`	0.884	0.116	0.000
rs2647044 lBF = `356.691` Chr`6` : `32,667,910`	0.881	0.119	0.000
rs2854275 lBF = `355.122` Chr`6` : `32,628,428`	0.876	0.124	0.000
rs3129716 lBF = `356.713` Chr`6` : `32,657,436`	0.876	0.124	0.000
rs41268928 lBF = `118.814` Chr`6` : `32,147,157`	0.000	0.125	0.874
rs55677935 lBF = `3.17533` Chr`2` : `62,228,013`	0.869	0.131	0.000
rs2050190 lBF = `201.867` Chr`6` : `32,339,076`	0.865	0.135	0.000
rs16897515 lBF = `103.483` Chr`6` : `27,278,020`	0.863	0.137	0.000
rs3131296 lBF = `282.624` Chr`6` : `32,172,993`	0.859	0.141	0.000
rs674313 lBF = `181.933` Chr`6` : `32,578,082`	0.855	0.145	0.000
rs9272219 lBF = `194.893` Chr`6` : `32,602,269`	0.854	0.146	0.000
rs17431357 lBF = `2.00976` Chr`12` : `120,880,434`	0.851	0.149	0.000
rs1265159 lBF = `403.633` Chr`6` : `31,140,047`	0.845	0.155	0.000
rs2233956 lBF = `143.072` Chr`6` : `31,081,205`	0.841	0.159	0.000
rs3853601 lBF = `88.7525` Chr`6` : `31,499,603`	0.000	0.164	0.836
rs1265181 lBF = `423.21` Chr`6` : `31,155,785`	0.834	0.166	0.000
rs7775397 lBF = `332.939` Chr`6` : `32,261,252`	0.830	0.170	0.000
rs79075617 lBF = `1.89618` Chr`6` : `56,693,272`	0.825	0.175	0.000
rs3135363 lBF = `120.715` Chr`6` : `32,389,648`	0.824	0.176	0.000
rs3130544 lBF = `315.312` Chr`6` : `31,058,340`	0.824	0.176	0.000
rs3099844 lBF = `324.729` Chr`6` : `31,448,976`	0.818	0.182	0.000
rs9266772 lBF = `70.3592` Chr`6` : `31,352,113`	0.000	0.195	0.805
rs2542151 lBF = `9.18119` Chr`18` : `12,779,947`	0.000	0.206	0.794
rs2847278 lBF = `8.94212` Chr`18` : `12,778,715`	0.000	0.207	0.793
rs2853953 lBF = `431.525` Chr`6` : `31,235,505`	0.776	0.224	0.000
rs2517510 lBF = `113.451` Chr`6` : `31,030,122`	0.000	0.225	0.775
rs9952991 lBF = `9.1347` Chr`18` : `12,780,464`	0.000	0.227	0.773
rs11134797 lBF = `1.98275` Chr`5` : `172,860,596`	0.768	0.232	0.000
rs2071278 lBF = `276.169` Chr`6` : `32,165,444`	0.762	0.238	0.000
rs3132541 lBF = `317.693` Chr`6` : `31,098,734`	0.760	0.240	0.000
rs2523557 lBF = `106.125` Chr`6` : `31,331,257`	0.754	0.246	0.000
rs3130573 lBF = `243.006` Chr`6` : `31,106,268`	0.748	0.252	0.000
rs3130614 lBF = `332.269` Chr`6` : `31,476,458`	0.745	0.255	0.000
rs2523989 lBF = `218.909` Chr`6` : `30,078,275`	0.740	0.260	0.000
rs7948661 lBF = `1.62947` Chr`11` : `118,341,649`	0.737	0.263	0.000
rs1362153 lBF = `1.5564` Chr`1` : `44,469,031`	0.000	0.266	0.734
rs117207033 lBF = `3.04464` Chr`15` : `97,116,274`	0.732	0.268	0.000
rs10518960 lBF = `1.83501` Chr`15` : `45,334,829`	0.730	0.270	0.000
rs393152 lBF = `1.75164` Chr`17` : `43,719,143`	0.000	0.274	0.726
rs2273017 lBF = `152.092` Chr`6` : `32,337,630`	0.722	0.278	0.000
rs204999 lBF = `228.365` Chr`6` : `32,109,979`	0.722	0.278	0.000
rs10255299 lBF = `1.33913` Chr`7` : `111,527,560`	0.000	0.286	0.714
rs7237497 lBF = `8.74734` Chr`18` : `12,777,325`	0.000	0.290	0.710
rs1893217 lBF = `10.27` Chr`18` : `12,809,340`	0.708	0.292	0.000
rs602875 lBF = `350.002` Chr`6` : `32,573,629`	0.706	0.294	0.000
rs8321 lBF = `266.851` Chr`6` : `30,032,522`	0.693	0.307	0.000
rs1893217 lBF = `10.0131` Chr`18` : `12,809,340`	0.693	0.307	0.000
rs2070600 lBF = `117.998` Chr`6` : `32,151,443`	0.000	0.310	0.690
rs1981997 lBF = `1.64472` Chr`17` : `44,056,767`	0.000	0.317	0.683
rs7750641 lBF = `320.214` Chr`6` : `31,129,310`	0.679	0.321	0.000
rs660895 lBF = `344.172` Chr`6` : `32,577,380`	0.000	0.322	0.678
rs12373124 lBF = `1.68074` Chr`17` : `43,924,219`	0.000	0.327	0.673
rs886424 lBF = `116.175` Chr`6` : `30,782,002`	0.671	0.329	0.000
rs17475168 lBF = `1.88477` Chr`2` : `65,598,866`	0.670	0.330	0.000
rs112635299 lBF = `21.8826` Chr`14` : `94,838,142`	0.669	0.331	0.000
rs2942168 lBF = `1.59962` Chr`17` : `43,714,850`	0.000	0.334	0.666
rs9274623 lBF = `216.471` Chr`6` : `32,635,998`	0.663	0.337	0.000
rs28929474 lBF = `22.7086` Chr`14` : `94,844,947`	0.644	0.356	0.000
rs3132580 lBF = `109.126` Chr`6` : `30,920,124`	0.640	0.360	0.000
rs28929474 lBF = `23.0864` Chr`14` : `94,844,947`	0.634	0.366	0.000
rs8070723 lBF = `1.48669` Chr`17` : `44,081,064`	0.000	0.370	0.630
rs7758128 lBF = `9.33586` Chr`6` : `32,345,283`	0.000	0.371	0.629
rs436582 lBF = `1.87622` Chr`9` : `118,956,668`	0.625	0.375	0.000
rs111433752 lBF = `1.4389` Chr`17` : `43,857,989`	0.000	0.377	0.623
rs3117099 lBF = `105.505` Chr`6` : `32,358,270`	0.620	0.380	0.000
rs3134792 lBF = `331.451` Chr`6` : `31,312,326`	0.619	0.381	0.000
rs2523590 lBF = `160.666` Chr`6` : `31,327,064`	0.000	0.381	0.619
rs12185268 lBF = `1.53498` Chr`17` : `43,923,683`	0.000	0.382	0.618
rs424232 lBF = `119.208` Chr`6` : `32,208,324`	0.615	0.385	0.000
rs3132581 lBF = `108.758` Chr`6` : `30,913,458`	0.615	0.385	0.000
rs9348876 lBF = `220.238` Chr`6` : `31,575,276`	0.000	0.387	0.613
rs9268856 lBF = `110.27` Chr`6` : `32,429,719`	0.610	0.390	0.000
rs7617480 lBF = `2.95875` Chr`3` : `49,210,732`	0.608	0.392	0.000
rs3131060 lBF = `106.407` Chr`6` : `30,763,291`	0.607	0.393	0.000
rs17577094 lBF = `1.37915` Chr`17` : `44,187,492`	0.000	0.395	0.605
rs3094067 lBF = `91.7381` Chr`6` : `30,299,245`	0.602	0.398	0.000
Affx-13926329 lBF = `1.44101` Chr`17` : `43,861,117`	0.000	0.398	0.602
rs2066847 lBF = `9.3263` Chr`16` : `50,763,778`	0.601	0.399	0.000
rs1864325 lBF = `1.4805` Chr`17` : `43,977,827`	0.000	0.399	0.601
rs62341268 lBF = `1.47038` Chr`4` : `190,224,770`	0.596	0.404	0.000
rs9267488 lBF = `326.254` Chr`6` : `31,514,247`	0.592	0.408	0.000
rs17689882 lBF = `1.46437` Chr`17` : `43,906,828`	0.000	0.409	0.591
rs75891980 lBF = `1.63266` Chr`11` : `93,879,832`	0.583	0.417	0.000
rs3129890 lBF = `102.814` Chr`6` : `32,414,273`	0.577	0.423	0.000
rs144447022 lBF = `218.803` Chr`6` : `29,244,219`	0.572	0.428	0.000
rs6903823 lBF = `104.677` Chr`6` : `28,322,296`	0.570	0.430	0.000
rs8072451 lBF = `1.45648` Chr`17` : `43,893,716`	0.000	0.431	0.569
rs17649553 lBF = `1.40109` Chr`17` : `43,994,648`	0.000	0.443	0.557
rs2596565 lBF = `335.924` Chr`6` : `31,353,329`	0.552	0.448	0.000
rs9276606 lBF = `218.269` Chr`6` : `32,736,695`	0.551	0.449	0.000
rs176095 lBF = `242.079` Chr`6` : `32,158,319`	0.549	0.451	0.000
rs415430 lBF = `1.20696` Chr`17` : `44,859,144`	0.544	0.456	0.000
rs2732703 lBF = `1.20799` Chr`17` : `44,353,222`	0.000	0.458	0.542
rs9257809 lBF = `228.113` Chr`6` : `29,356,331`	0.526	0.474	0.000
rs2596500 lBF = `332.38` Chr`6` : `31,321,267`	0.523	0.477	0.000
rs9357155 lBF = `46.23` Chr`6` : `32,809,848`	0.521	0.479	0.000
rs199515 lBF = `1.16496` Chr`17` : `44,856,641`	0.516	0.484	0.000
rs2734583 lBF = `326.392` Chr`6` : `31,505,480`	0.516	0.484	0.000
rs2523607 lBF = `332.158` Chr`6` : `31,322,790`	0.515	0.485	0.000
rs2157337 lBF = `258.488` Chr`6` : `32,501,144`	0.514	0.486	0.000
rs1233491 lBF = `234.111` Chr`6` : `29,461,730`	0.507	0.493	0.000
rs1015563 lBF = `1.19655` Chr`20` : `6,690,101`	0.502	0.498	0.000
rs11880316 lBF = `1.17343` Chr`19` : `31,911,129`	0.000	0.505	0.495
rs61819372 lBF = `8.34272` Chr`1` : `114,072,110`	0.494	0.506	0.000
rs3135753 lBF = `1.18304` Chr`10` : `123,280,658`	0.494	0.506	0.000
rs2523809 lBF = `11.5617` Chr`6` : `29,849,619`	0.000	0.506	0.494
rs116916924 lBF = `3.32967` Chr`11` : `48,269,422`	0.490	0.510	0.000
rs2021722 lBF = `202.92` Chr`6` : `30,174,131`	0.489	0.511	0.000
rs3096697 lBF = `268.674` Chr`6` : `32,134,510`	0.484	0.516	0.000
rs1811197 lBF = `313.908` Chr`6` : `31,327,660`	0.472	0.528	0.000
rs6906021 lBF = `165.177` Chr`6` : `32,626,311`	0.469	0.531	0.000
rs3134945 lBF = `268.571` Chr`6` : `32,146,492`	0.452	0.548	0.000
rs7865017 lBF = `1.30593` Chr`9` : `133,770,222`	0.000	0.552	0.448
rs3096696 lBF = `268.682` Chr`6` : `32,122,472`	0.446	0.554	0.000
rs74434895 lBF = `7.60443` Chr`1` : `113,934,072`	0.444	0.556	0.000
rs9271858 lBF = `198.991` Chr`6` : `32,595,223`	0.440	0.560	0.000
rs55834529 lBF = `173.216` Chr`6` : `27,072,542`	0.440	0.560	0.000
rs1150757 lBF = `328.977` Chr`6` : `32,029,205`	0.434	0.566	0.000
rs1150753 lBF = `329.049` Chr`6` : `32,059,867`	0.429	0.571	0.000
rs3094604 lBF = `333.202` Chr`6` : `31,434,111`	0.427	0.572	0.000
rs9272143 lBF = `199.033` Chr`6` : `32,600,803`	0.427	0.573	0.000
rs199533 lBF = `1.07275` Chr`17` : `44,828,931`	0.000	0.582	0.418
rs1800625 lBF = `145.036` Chr`6` : `32,152,442`	0.415	0.585	0.000
rs3131379 lBF = `326.498` Chr`6` : `31,721,033`	0.411	0.589	0.000
rs1419881 lBF = `180.745` Chr`6` : `31,130,593`	0.409	0.591	0.000
rs2524276 lBF = `51.7811` Chr`6` : `31,408,265`	0.000	0.593	0.407
rs1634726 lBF = `152.858` Chr`6` : `30,985,828`	0.406	0.594	0.000
rs9266629 lBF = `75.0533` Chr`6` : `31,346,822`	0.000	0.594	0.406
rs16899524 lBF = `34.0141` Chr`6` : `31,362,310`	0.000	0.596	0.404
rs76602912 lBF = `3.22657` Chr`20` : `57,459,868`	0.402	0.598	0.000
rs389884 lBF = `329.107` Chr`6` : `31,940,897`	0.400	0.600	0.000
rs9272105 lBF = `184.365` Chr`6` : `32,599,999`	0.397	0.603	0.000
rs2523722 lBF = `207.117` Chr`6` : `30,165,273`	0.389	0.611	0.000
rs4324798 lBF = `213.822` Chr`6` : `28,776,117`	0.387	0.613	0.001
rs601338 lBF = `22.1804` Chr`19` : `49,206,674`	0.387	0.613	0.000
rs199443 lBF = `1.03169` Chr`17` : `44,819,565`	0.000	0.613	0.387
rs601338 lBF = `23.058` Chr`19` : `49,206,674`	0.000	0.613	0.387
rs3763309 lBF = `263.742` Chr`6` : `32,375,973`	0.000	0.614	0.386
rs34706883 lBF = `184.488` Chr`6` : `27,805,255`	0.383	0.617	0.000
rs2857281 lBF = `34.3199` Chr`6` : `31,374,262`	0.000	0.618	0.382
rs3130284 lBF = `268.659` Chr`6` : `32,140,487`	0.378	0.622	0.000
rs3131018 lBF = `147.239` Chr`6` : `31,143,582`	0.374	0.626	0.000
rs183211 lBF = `0.920565` Chr`17` : `44,788,310`	0.000	0.626	0.374
rs9296009 lBF = `121.402` Chr`6` : `32,114,515`	0.000	0.631	0.369
rs7207400 lBF = `2.45983` Chr`17` : `43,824,360`	0.000	0.632	0.368
rs17631303 lBF = `0.812767` Chr`17` : `43,516,402`	0.000	0.633	0.367
rs516246 lBF = `21.6502` Chr`19` : `49,206,172`	0.366	0.634	0.000
rs492602 lBF = `21.8959` Chr`19` : `49,206,417`	0.364	0.636	0.000
rs11012 lBF = `0.807561` Chr`17` : `43,513,441`	0.000	0.637	0.363
rs6085661 lBF = `0.764809` Chr`20` : `6,693,128`	0.361	0.639	0.000
rs1270942 lBF = `330.735` Chr`6` : `31,918,860`	0.361	0.639	0.000
rs3763312 lBF = `260.995` Chr`6` : `32,376,348`	0.000	0.647	0.353
rs9267531 lBF = `326.564` Chr`6` : `31,636,742`	0.349	0.651	0.000
rs3117582 lBF = `326.435` Chr`6` : `31,620,520`	0.346	0.654	0.000
rs1150754 lBF = `313.078` Chr`6` : `32,050,758`	0.343	0.657	0.000
rs35597309 lBF = `10.975` Chr`6` : `32,589,266`	0.007	0.658	0.335
rs3094228 lBF = `341.324` Chr`6` : `31,429,927`	0.342	0.658	0.000
rs76770395 lBF = `1.79092` Chr`5` : `169,499,663`	0.339	0.661	0.000
rs41268902 lBF = `94.1617` Chr`6` : `32,071,008`	0.000	0.663	0.337
rs3094084 lBF = `121.977` Chr`6` : `30,947,509`	0.329	0.671	0.000
rs2922994 lBF = `329.558` Chr`6` : `31,335,901`	0.326	0.674	0.000
rs17693963 lBF = `176.29` Chr`6` : `27,710,165`	0.325	0.675	0.001
rs13217619 lBF = `203.741` Chr`6` : `28,306,671`	0.322	0.678	0.000
rs41266839 lBF = `168.715` Chr`6` : `26,409,890`	0.321	0.678	0.001
rs9303525 lBF = `0.836245` Chr`17` : `44,187,257`	0.000	0.679	0.321
rs6932590 lBF = `61.2228` Chr`6` : `27,248,931`	0.318	0.682	0.000
rs73396800 lBF = `82.3349` Chr`6` : `32,914,726`	0.312	0.688	0.000
rs17690703 lBF = `1.36451` Chr`17` : `43,925,297`	0.000	0.692	0.308
rs9270965 lBF = `189.127` Chr`6` : `32,573,471`	0.294	0.706	0.000
rs3132935 lBF = `130.064` Chr`6` : `32,171,075`	0.293	0.707	0.000
rs3094117 lBF = `178.215` Chr`6` : `30,737,486`	0.292	0.708	0.000
rs10892279 lBF = `4.40301` Chr`11` : `118,611,781`	0.000	0.708	0.292
rs2524005 lBF = `126.515` Chr`6` : `29,899,677`	0.291	0.709	0.000
rs926070 lBF = `145.961` Chr`6` : `32,257,566`	0.291	0.709	0.000
rs2395163 lBF = `260.122` Chr`6` : `32,387,809`	0.000	0.714	0.285
rs117451751 lBF = `0.861888` Chr`17` : `12,809,905`	0.000	0.716	0.284
rs73173542 lBF = `0.830828` Chr`5` : `87,810,867`	0.281	0.719	0.000
rs3077 lBF = `99.0909` Chr`6` : `33,033,022`	0.280	0.720	0.000
rs25422 lBF = `1.24515` Chr`6` : `118,807,847`	0.000	0.721	0.279
rs1567865 lBF = `0.62287` Chr`20` : `47,881,967`	0.000	0.728	0.272
rs199499 lBF = `0.64875` Chr`17` : `44,865,498`	0.000	0.728	0.272
rs9273401 lBF = `136.147` Chr`6` : `32,627,129`	0.004	0.741	0.255
rs1265093 lBF = `98.9414` Chr`6` : `31,107,187`	0.000	0.741	0.259
rs2732614 lBF = `0.749545` Chr`17` : `44,364,209`	0.000	0.742	0.258
rs12123821 lBF = `57.8742` Chr`1` : `152,179,152`	0.258	0.742	0.000
rs1480380 lBF = `87.0513` Chr`6` : `32,913,246`	0.253	0.747	0.000
rs2855812 lBF = `331.658` Chr`6` : `31,472,720`	0.250	0.750	0.000
rs1302019 lBF = `0.661709` Chr`6` : `147,971,574`	0.000	0.752	0.248
rs79858930 lBF = `1.3229` Chr`10` : `83,047,434`	0.247	0.753	0.000
rs2524069 lBF = `319.373` Chr`6` : `31,244,789`	0.241	0.759	0.000
rs6927322 lBF = `31.8112` Chr`6` : `31,088,981`	0.000	0.759	0.241
rs7772131 lBF = `3.65035` Chr`6` : `30,795,171`	0.239	0.760	0.000
rs3763317 lBF = `354.62` Chr`6` : `32,376,788`	0.001	0.763	0.236
rs422951 lBF = `152.812` Chr`6` : `32,188,383`	0.224	0.776	0.000
rs3893464 lBF = `42.8143` Chr`6` : `29,935,250`	0.223	0.777	0.000
rs615672 lBF = `310.82` Chr`6` : `32,574,171`	0.219	0.781	0.000
rs78378222 lBF = `4.16698` Chr`17` : `7,571,752`	0.218	0.782	0.000
rs237743 lBF = `0.534242` Chr`20` : `47,903,019`	0.000	0.785	0.215
rs9500927 lBF = `39.1189` Chr`6` : `32,961,361`	0.213	0.787	0.000
rs74472562 lBF = `0.709194` Chr`11` : `44,762,755`	0.210	0.790	0.000
rs6910071 lBF = `268.13` Chr`6` : `32,282,854`	0.000	0.790	0.210
rs3823355 lBF = `47.0631` Chr`6` : `29,942,083`	0.000	0.791	0.209
rs558702 lBF = `327.558` Chr`6` : `31,870,326`	0.205	0.795	0.000
rs12370001 lBF = `1.36352` Chr`12` : `73,044,622`	0.204	0.796	0.000
rs6904029 lBF = `47.0274` Chr`6` : `29,943,067`	0.000	0.797	0.203
rs9267911 lBF = `43.0428` Chr`6` : `32,205,110`	0.201	0.799	0.000
rs9264942 lBF = `287.796` Chr`6` : `31,274,380`	0.000	0.803	0.197
rs9368699 lBF = `55.2678` Chr`6` : `31,802,541`	0.000	0.803	0.197
rs73132848 lBF = `3.75019` Chr`3` : `8,806,424`	0.197	0.803	0.000
rs12201940 lBF = `0.683139` Chr`6` : `5,859,679`	0.197	0.803	0.000
rs10790268 lBF = `7.2695` Chr`11` : `118,729,391`	0.197	0.803	0.000
rs80113388 lBF = `0.731138` Chr`8` : `3,467,643`	0.196	0.804	0.000
rs3132565 lBF = `200.723` Chr`6` : `31,102,964`	0.195	0.805	0.000
rs281379 lBF = `18.1958` Chr`19` : `49,214,274`	0.194	0.806	0.000
rs72799290 lBF = `3.62467` Chr`16` : `84,121,289`	0.193	0.806	0.000
rs2076529 lBF = `182.712` Chr`6` : `32,363,955`	0.000	0.807	0.193
rs2071277 lBF = `153.453` Chr`6` : `32,171,683`	0.193	0.807	0.000
rs10507047 lBF = `0.729406` Chr`12` : `95,604,290`	0.189	0.811	0.000
rs17201248 lBF = `18.8353` Chr`6` : `31,803,130`	0.000	0.811	0.189
rs2071543 lBF = `37.4568` Chr`6` : `32,811,629`	0.188	0.812	0.000
rs10971170 lBF = `2.46731` Chr`9` : `32,870,068`	0.187	0.813	0.000
rs503279 lBF = `17.268` Chr`19` : `49,209,010`	0.185	0.815	0.000
rs76361614 lBF = `1.56054` Chr`2` : `37,527,216`	0.181	0.818	0.001
rs35106244 lBF = `17.7978` Chr`19` : `49,203,829`	0.182	0.818	0.000
rs2076530 lBF = `182.001` Chr`6` : `32,363,816`	0.000	0.819	0.181
rs2516399 lBF = `23.9353` Chr`6` : `31,481,299`	0.000	0.819	0.181
rs4455710 lBF = `272.616` Chr`6` : `32,608,858`	0.176	0.824	0.000
rs73200436 lBF = `0.644277` Chr`12` : `110,062,693`	0.175	0.825	0.000
rs3129939 lBF = `89.8505` Chr`6` : `32,336,766`	0.171	0.829	0.000
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rs73200449 lBF = `0.659566` Chr`12` : `110,078,967`	0.168	0.832	0.000
rs504963 lBF = `17.3106` Chr`19` : `49,208,865`	0.167	0.833	0.000
rs16871226 lBF = `15.384` Chr`6` : `32,915,851`	0.000	0.835	0.165
rs2596542 lBF = `161.701` Chr`6` : `31,366,595`	0.000	0.835	0.165
rs910049 lBF = `164.709` Chr`6` : `32,315,727`	0.165	0.835	0.000
rs12413578 lBF = `44.9786` Chr`10` : `9,049,253`	0.000	0.837	0.163
rs78857879 lBF = `0.743816` Chr`2` : `56,135,099`	0.161	0.839	0.000
rs11890028 lBF = `0.402147` Chr`2` : `166,943,277`	0.000	0.840	0.160
rs632111 lBF = `17.8792` Chr`19` : `49,208,978`	0.158	0.842	0.000
rs116877397 lBF = `1.00264` Chr`12` : `121,162,996`	0.157	0.843	0.000
rs3129055 lBF = `90.0144` Chr`6` : `29,670,261`	0.152	0.848	0.000
rs602662 lBF = `17.7299` Chr`19` : `49,206,985`	0.151	0.849	0.000
rs116855070 lBF = `1.26005` Chr`6` : `137,922,391`	0.000	0.853	0.147
rs9275326 lBF = `138.024` Chr`6` : `32,666,660`	0.006	0.855	0.139
rs1794265 lBF = `8.67049` Chr`6` : `32,674,737`	0.057	0.859	0.084
rs114067101 lBF = `15.4853` Chr`6` : `32,457,960`	0.000	0.859	0.141
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rs10176755 lBF = `0.548702` Chr`2` : `171,365,889`	0.131	0.869	0.000
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rs9263567 lBF = `298.411` Chr`6` : `31,069,527`	0.128	0.872	0.000
rs9271117 lBF = `229.082` Chr`6` : `32,576,795`	0.128	0.872	0.000
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rs11625461 lBF = `0.541899` Chr`14` : `52,403,684`	0.126	0.874	0.000
rs9271060 lBF = `228.727` Chr`6` : `32,575,513`	0.124	0.876	0.000
rs1458065 lBF = `1.2324` Chr`3` : `56,012,812`	0.000	0.876	0.124
rs641153 lBF = `37.0216` Chr`6` : `31,914,180`	0.000	0.876	0.124
rs9273076 lBF = `180.89` Chr`6` : `32,612,301`	0.122	0.878	0.000
rs9271192 lBF = `228.602` Chr`6` : `32,578,530`	0.122	0.878	0.000
rs9271100 lBF = `228.468` Chr`6` : `32,576,478`	0.121	0.879	0.000
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rs1046089 lBF = `229.724` Chr`6` : `31,602,967`	0.113	0.887	0.000
rs6935053 lBF = `45.6953` Chr`6` : `29,934,163`	0.000	0.887	0.113
rs9277555 lBF = `90.3087` Chr`6` : `33,055,605`	0.113	0.887	0.000
rs34391416 lBF = `0.336056` Chr`11` : `831,818`	0.000	0.887	0.113
rs79014439 lBF = `0.422877` Chr`6` : `24,901,861`	0.112	0.888	0.000
rs7647973 lBF = `0.907866` Chr`3` : `49,510,931`	0.000	0.890	0.110
rs522162 lBF = `36.7828` Chr`6` : `31,919,917`	0.000	0.890	0.110
rs652888 lBF = `99.1989` Chr`6` : `31,851,234`	0.109	0.891	0.000
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rs7901794 lBF = `0.458254` Chr`10` : `64,877,938`	0.000	0.899	0.101
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rs78428368 lBF = `0.416822` Chr`4` : `164,617,481`	0.098	0.902	0.000
rs9271366 lBF = `176.988` Chr`6` : `32,586,854`	0.098	0.902	0.000
rs1049110 lBF = `123.179` Chr`6` : `32,726,803`	0.000	0.903	0.097
rs987870 lBF = `106.227` Chr`6` : `33,042,880`	0.095	0.905	0.000
rs9268402 lBF = `251.035` Chr`6` : `32,341,353`	0.000	0.905	0.095
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rs2524163 lBF = `242.456` Chr`6` : `31,259,579`	0.000	0.906	0.094
rs2523822 lBF = `42.1767` Chr`6` : `29,828,660`	0.000	0.907	0.093
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rs2395029 lBF = `60.9336` Chr`6` : `31,431,780`	0.000	0.908	0.092
rs11752643 lBF = `32.4218` Chr`6` : `32,669,373`	0.000	0.908	0.091
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rs116701331 lBF = `0.816967` Chr`2` : `195,567,306`	0.086	0.914	0.000
rs3130941 lBF = `54.7082` Chr`6` : `31,197,514`	0.086	0.914	0.000
rs9275319 lBF = `116.583` Chr`6` : `32,666,295`	0.012	0.918	0.071
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rs8083786 lBF = `3.00779` Chr`18` : `12,881,361`	0.080	0.920	0.000
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rs438475 lBF = `30.1654` Chr`6` : `32,186,245`	0.000	0.925	0.075
rs3117242 lBF = `87.9464` Chr`6` : `33,069,893`	0.075	0.925	0.000
rs3828840 lBF = `233.937` Chr`6` : `32,520,907`	0.074	0.926	0.000
rs10947261 lBF = `12.3486` Chr`6` : `32,373,232`	0.000	0.927	0.073
rs443198 lBF = `86.8324` Chr`6` : `32,190,406`	0.073	0.927	0.000
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rs11620399 lBF = `0.365576` Chr`13` : `48,436,925`	0.072	0.928	0.000
rs10514718 lBF = `0.403089` Chr`3` : `61,413,814`	0.000	0.928	0.072
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rs76720445 lBF = `0.389604` Chr`7` : `1,792,396`	0.071	0.929	0.000
rs9275698 lBF = `52.9683` Chr`6` : `32,687,973`	0.071	0.929	0.000
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rs9275563 lBF = `261.746` Chr`6` : `32,677,912`	0.000	0.930	0.070
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rs9268480 lBF = `181.93` Chr`6` : `32,363,844`	0.000	0.932	0.068
rs9271348 lBF = `278.167` Chr`6` : `32,583,742`	0.067	0.933	0.000
rs9270986 lBF = `167.975` Chr`6` : `32,574,060`	0.067	0.933	0.000
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rs3130340 lBF = `67.4906` Chr`6` : `32,244,627`	0.067	0.933	0.000
rs2853946 lBF = `119.895` Chr`6` : `31,247,203`	0.000	0.933	0.067
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rs9268516 lBF = `181.671` Chr`6` : `32,379,489`	0.000	0.935	0.065
rs4713226 lBF = `1.9174` Chr`6` : `29,434,414`	0.000	0.936	0.064
rs13107325 lBF = `16.8696` Chr`4` : `103,188,709`	0.064	0.936	0.000
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rs9940128 lBF = `4.38264` Chr`16` : `53,800,754`	0.000	0.938	0.062
rs12775535 lBF = `0.280845` Chr`10` : `25,918,879`	0.062	0.938	0.000
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rs12883788 lBF = `0.446458` Chr`14` : `33,303,540`	0.000	0.940	0.060
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rs9270984 lBF = `168.705` Chr`6` : `32,573,991`	0.059	0.941	0.000
rs650466 lBF = `0.639499` Chr`12` : `118,646,661`	0.000	0.941	0.059
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rs9271640 lBF = `173.195` Chr`6` : `32,592,200`	0.057	0.943	0.000
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rs78516619 lBF = `29.5761` Chr`1` : `168,889,373`	0.044	0.956	0.000
rs13135092 lBF = `16.8388` Chr`4` : `103,198,082`	0.043	0.957	0.000
rs6738962 lBF = `0.0929821` Chr`2` : `80,281,173`	0.043	0.957	0.000
rs8176719 lBF = `101.453` Chr`9` : `136,132,908`	0.000	0.957	0.043
rs77329626 lBF = `0.133897` Chr`10` : `61,664,195`	0.043	0.957	0.000
rs184940006 lBF = `0.23848` Chr`13` : `105,078,157`	0.043	0.957	0.000
rs259919 lBF = `57.7621` Chr`6` : `30,025,503`	0.042	0.958	0.000
rs3135388 lBF = `174.731` Chr`6` : `32,413,051`	0.042	0.958	0.000
rs118155463 lBF = `0.263534` Chr`17` : `8,079,842`	0.042	0.958	0.000
rs12536985 lBF = `0.118775` Chr`7` : `18,396,960`	0.042	0.958	0.000
rs477515 lBF = `230.691` Chr`6` : `32,569,691`	0.000	0.958	0.042
rs12528714 lBF = `0.451641` Chr`6` : `167,754,975`	0.000	0.958	0.041
rs3129889 lBF = `175.048` Chr`6` : `32,413,545`	0.041	0.959	0.000
rs9930506 lBF = `3.59487` Chr`16` : `53,830,465`	0.000	0.959	0.041
rs9820695 lBF = `1.97201` Chr`3` : `103,331,483`	0.000	0.959	0.041
rs112472535 lBF = `0.315806` Chr`3` : `130,285,880`	0.040	0.960	0.000
rs11175593 lBF = `0.400423` Chr`12` : `40,601,940`	0.040	0.960	0.000
rs9271588 lBF = `280.634` Chr`6` : `32,590,953`	0.001	0.960	0.039
rs12614 lBF = `2.68013` Chr`6` : `31,914,179`	0.000	0.960	0.040
rs76335349 lBF = `0.233826` Chr`7` : `126,490,550`	0.040	0.960	0.000
rs3135350 lBF = `174.663` Chr`6` : `32,392,981`	0.039	0.961	0.000
rs117411365 lBF = `1.83368` Chr`18` : `67,468,303`	0.039	0.961	0.001
rs1351394 lBF = `2.2176` Chr`12` : `66,351,826`	0.039	0.961	0.000
rs1050529 lBF = `60.0185` Chr`6` : `31,324,615`	0.000	0.961	0.039
rs7383287 lBF = `88.0053` Chr`6` : `32,783,086`	0.039	0.961	0.000
rs6120141 lBF = `0.381169` Chr`20` : `31,768,655`	0.000	0.962	0.038
rs9821642 lBF = `2.10427` Chr`3` : `103,345,439`	0.000	0.962	0.038
rs115073616 lBF = `0.716089` Chr`2` : `22,668,759`	0.034	0.963	0.004
rs4321864 lBF = `273.442` Chr`6` : `32,399,187`	0.001	0.963	0.036
rs1558902 lBF = `2.23592` Chr`16` : `53,803,574`	0.000	0.963	0.037
rs17124372 lBF = `0.270176` Chr`20` : `31,798,437`	0.000	0.963	0.037
rs10520638 lBF = `0.214176` Chr`15` : `87,253,534`	0.037	0.963	0.000
rs77990856 lBF = `0.156982` Chr`18` : `48,016,887`	0.000	0.964	0.036
rs1421085 lBF = `2.19593` Chr`16` : `53,800,954`	0.000	0.964	0.036
rs2174550 lBF = `0.121757` Chr`5` : `40,602,383`	0.036	0.964	0.000
rs76264265 lBF = `0.203023` Chr`1` : `37,309,390`	0.035	0.964	0.000
rs79335261 lBF = `0.255002` Chr`12` : `56,497,641`	0.000	0.964	0.036
rs35518360 lBF = `10.729` Chr`4` : `103,146,890`	0.035	0.964	0.000
rs7193144 lBF = `1.81928` Chr`16` : `53,810,686`	0.000	0.965	0.035
rs75672964 lBF = `0.115217` Chr`7` : `131,321,010`	0.035	0.965	0.000
rs117604355 lBF = `0.241742` Chr`16` : `82,276,031`	0.000	0.966	0.034
rs17124955 lBF = `0.224764` Chr`14` : `89,372,751`	0.034	0.966	0.000
rs17086954 lBF = `0.66723` Chr`6` : `156,337,304`	0.034	0.966	0.000
rs9357152 lBF = `223.033` Chr`6` : `32,664,960`	0.000	0.966	0.034
rs62033400 lBF = `1.87269` Chr`16` : `53,811,788`	0.000	0.966	0.034
rs4856162 lBF = `1.81929` Chr`3` : `103,292,226`	0.000	0.966	0.034
rs1186300 lBF = `1.89771` Chr`12` : `17,728,991`	0.034	0.966	0.000
rs2281388 lBF = `7.76788` Chr`6` : `33,060,118`	0.001	0.966	0.032
rs1632862 lBF = `201.627` Chr`6` : `30,969,003`	0.033	0.967	0.000
rs241428 lBF = `3.5704` Chr`6` : `32,804,070`	0.033	0.967	0.000
rs12422544 lBF = `0.417415` Chr`12` : `40,528,432`	0.033	0.967	0.000
rs3823418 lBF = `50.9375` Chr`6` : `31,100,942`	0.000	0.967	0.033
rs2255221 lBF = `46.6596` Chr`6` : `31,431,691`	0.000	0.968	0.032
rs117530360 lBF = `0.218796` Chr`16` : `1,952,972`	0.032	0.968	0.000
rs12149832 lBF = `1.79372` Chr`16` : `53,842,908`	0.000	0.969	0.031
rs7358151 lBF = `0.214149` Chr`10` : `28,017,572`	0.031	0.969	0.000
rs1397924 lBF = `0.578522` Chr`3` : `103,245,092`	0.000	0.969	0.031
rs10784502 lBF = `2.14075` Chr`12` : `66,343,810`	0.031	0.969	0.000
rs1770678 lBF = `0.40126` Chr`1` : `82,765,052`	0.031	0.969	0.000
rs2647050 lBF = `187.567` Chr`6` : `32,669,767`	0.000	0.969	0.031
rs11583200 lBF = `0.194895` Chr`1` : `50,559,820`	0.000	0.969	0.031
rs117932393 lBF = `0.125274` Chr`9` : `109,152,709`	0.031	0.969	0.000
rs2856718 lBF = `187.542` Chr`6` : `32,670,255`	0.000	0.969	0.031
rs8043757 lBF = `1.74004` Chr`16` : `53,813,450`	0.000	0.969	0.031
rs3763313 lBF = `207.854` Chr`6` : `32,376,471`	0.000	0.969	0.031
rs471144 lBF = `29.6612` Chr`1` : `152,454,255`	0.030	0.970	0.000
rs13194053 lBF = `86.288` Chr`6` : `27,143,883`	0.030	0.970	0.000
rs1521 lBF = `72.4436` Chr`6` : `31,350,704`	0.030	0.970	0.000
rs7309 lBF = `1.68201` Chr`2` : `162,092,640`	0.000	0.970	0.030
rs12316703 lBF = `0.370627` Chr`12` : `118,840,457`	0.030	0.970	0.000
rs11705604 lBF = `0.242066` Chr`22` : `43,719,422`	0.000	0.970	0.030
rs58721818 lBF = `3.59687` Chr`6` : `138,243,739`	0.000	0.970	0.030
rs7339349 lBF = `0.141172` Chr`13` : `74,556,225`	0.029	0.971	0.000
rs17216786 lBF = `0.90343` Chr`16` : `83,487,471`	0.000	0.971	0.029
rs2516049 lBF = `107.941` Chr`6` : `32,570,400`	0.000	0.971	0.029
rs34536443 lBF = `24.7217` Chr`19` : `10,463,118`	0.003	0.971	0.026
rs17246404 lBF = `0.291135` Chr`7` : `124,462,661`	0.000	0.971	0.029
rs6720394 lBF = `1.64584` Chr`2` : `111,989,372`	0.000	0.971	0.029
rs17817449 lBF = `1.6384` Chr`16` : `53,813,367`	0.000	0.971	0.029
rs4149909 lBF = `0.204898` Chr`1` : `242,023,898`	0.028	0.972	0.000
rs2639889 lBF = `0.836379` Chr`16` : `61,123,147`	0.000	0.972	0.028
rs3869109 lBF = `211.3` Chr`6` : `31,184,196`	0.000	0.972	0.028
rs2722223 lBF = `0.573838` Chr`12` : `90,233,876`	0.027	0.972	0.000
rs4813802 lBF = `-0.0146202` Chr`20` : `6,699,595`	0.028	0.972	0.000
rs4151657 lBF = `148.488` Chr`6` : `31,917,540`	0.000	0.973	0.027
rs9936385 lBF = `1.74542` Chr`16` : `53,819,169`	0.000	0.973	0.027
rs45475795 lBF = `11.6242` Chr`4` : `123,399,491`	0.026	0.973	0.001
rs76595471 lBF = `0.281433` Chr`12` : `80,228,443`	0.027	0.973	0.000
rs7968682 lBF = `2.65218` Chr`12` : `66,371,880`	0.026	0.974	0.000
rs577272 lBF = `129.92` Chr`6` : `31,837,963`	0.000	0.974	0.026
rs11602337 lBF = `-0.0272231` Chr`11` : `25,113,781`	0.026	0.974	0.000
rs4921164 lBF = `0.345239` Chr`5` : `158,545,464`	0.026	0.974	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	Infections
Nested terms	Tuberculosis (tb) Helicobacter pylori Mrsa / methicillin resistant staphylococcus aureus Whooping cough / pertussis Diphtheria Scarlet fever / scarlatina Chlamydia

Diagnostic term associations

Self-Reported Statistics (`SRS`)

Diagnostic term associations

Self-Reported Statistics (SRS)

Self-Reported Statistics (`SRS`)