TreeWAS – Mrsa / methicillin resistant staphylococcus aureus

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs2858884 lBF = `75.146` Chr`6` : `32,700,083`	0.764	0.236	0.000
rs16897515 lBF = `103.483` Chr`6` : `27,278,020`	0.740	0.260	0.000
rs3094548 lBF = `83.4685` Chr`6` : `29,355,202`	0.000	0.282	0.718
rs9263739 lBF = `60.3753` Chr`6` : `31,111,356`	0.000	0.291	0.708
rs2161277 lBF = `6.99125` Chr`5` : `62,866,262`	0.000	0.313	0.687
rs3095267 lBF = `127.274` Chr`6` : `29,607,046`	0.674	0.326	0.000
rs2040406 lBF = `357.929` Chr`6` : `32,603,007`	0.653	0.347	0.000
rs55677935 lBF = `3.17533` Chr`2` : `62,228,013`	0.623	0.377	0.000
rs9272729 lBF = `358.144` Chr`6` : `32,609,594`	0.614	0.386	0.000
rs17431357 lBF = `2.00976` Chr`12` : `120,880,434`	0.610	0.390	0.000
rs1362153 lBF = `1.5564` Chr`1` : `44,469,031`	0.000	0.396	0.604
rs2187668 lBF = `358.549` Chr`6` : `32,605,884`	0.601	0.398	0.000
rs3130618 lBF = `275.803` Chr`6` : `31,632,134`	0.598	0.402	0.000
rs79075617 lBF = `1.89618` Chr`6` : `56,693,272`	0.591	0.409	0.000
rs3115663 lBF = `274.955` Chr`6` : `31,601,843`	0.590	0.410	0.000
rs3853601 lBF = `88.7525` Chr`6` : `31,499,603`	0.000	0.415	0.585
rs1265112 lBF = `309.035` Chr`6` : `31,118,019`	0.582	0.417	0.000
rs2647044 lBF = `356.691` Chr`6` : `32,667,910`	0.582	0.418	0.000
rs3129716 lBF = `356.713` Chr`6` : `32,657,436`	0.579	0.421	0.000
rs2854275 lBF = `355.122` Chr`6` : `32,628,428`	0.578	0.422	0.000
rs9267119 lBF = `74.6145` Chr`6` : `31,424,585`	0.000	0.423	0.576
rs3129763 lBF = `356.287` Chr`6` : `32,590,925`	0.576	0.424	0.000
rs7775397 lBF = `332.939` Chr`6` : `32,261,252`	0.571	0.429	0.000
rs393152 lBF = `1.75164` Chr`17` : `43,719,143`	0.000	0.430	0.570
rs3131296 lBF = `282.624` Chr`6` : `32,172,993`	0.552	0.448	0.000
rs11134797 lBF = `1.98275` Chr`5` : `172,860,596`	0.551	0.449	0.000
rs3130544 lBF = `315.312` Chr`6` : `31,058,340`	0.550	0.450	0.000
rs8321 lBF = `266.851` Chr`6` : `30,032,522`	0.548	0.452	0.000
rs2523989 lBF = `218.909` Chr`6` : `30,078,275`	0.546	0.453	0.000
rs3099844 lBF = `324.729` Chr`6` : `31,448,976`	0.544	0.456	0.000
rs660895 lBF = `344.172` Chr`6` : `32,577,380`	0.000	0.459	0.541
rs1981997 lBF = `1.64472` Chr`17` : `44,056,767`	0.000	0.465	0.535
rs41268928 lBF = `118.814` Chr`6` : `32,147,157`	0.000	0.470	0.530
rs886424 lBF = `116.175` Chr`6` : `30,782,002`	0.528	0.472	0.000
rs7948661 lBF = `1.62947` Chr`11` : `118,341,649`	0.528	0.472	0.000
rs12373124 lBF = `1.68074` Chr`17` : `43,924,219`	0.000	0.475	0.525
rs117207033 lBF = `3.04464` Chr`15` : `97,116,274`	0.525	0.475	0.000
rs10518960 lBF = `1.83501` Chr`15` : `45,334,829`	0.523	0.477	0.000
rs2517510 lBF = `113.451` Chr`6` : `31,030,122`	0.000	0.478	0.522
rs2942168 lBF = `1.59962` Chr`17` : `43,714,850`	0.000	0.479	0.521
rs111433752 lBF = `1.4389` Chr`17` : `43,857,989`	0.000	0.485	0.515
rs9272535 lBF = `364.218` Chr`6` : `32,606,756`	0.514	0.486	0.000
rs2523590 lBF = `160.666` Chr`6` : `31,327,064`	0.000	0.486	0.514
rs2050190 lBF = `201.867` Chr`6` : `32,339,076`	0.513	0.487	0.000
rs1265159 lBF = `403.633` Chr`6` : `31,140,047`	0.513	0.487	0.000
rs10255299 lBF = `1.33913` Chr`7` : `111,527,560`	0.000	0.491	0.509
rs1265181 lBF = `423.21` Chr`6` : `31,155,785`	0.502	0.498	0.000
rs3132541 lBF = `317.693` Chr`6` : `31,098,734`	0.502	0.498	0.000
rs674313 lBF = `181.933` Chr`6` : `32,578,082`	0.496	0.504	0.000
rs204999 lBF = `228.365` Chr`6` : `32,109,979`	0.492	0.508	0.000
Affx-13926329 lBF = `1.44101` Chr`17` : `43,861,117`	0.000	0.509	0.491
rs1980493 lBF = `289.303` Chr`6` : `32,363,215`	0.491	0.509	0.000
rs3130614 lBF = `332.269` Chr`6` : `31,476,458`	0.490	0.510	0.000
rs12185268 lBF = `1.53498` Chr`17` : `43,923,683`	0.000	0.516	0.484
rs17475168 lBF = `1.88477` Chr`2` : `65,598,866`	0.480	0.520	0.000
rs112635299 lBF = `21.8826` Chr`14` : `94,838,142`	0.480	0.520	0.000
rs8070723 lBF = `1.48669` Chr`17` : `44,081,064`	0.000	0.522	0.478
rs9272219 lBF = `194.893` Chr`6` : `32,602,269`	0.477	0.522	0.000
rs17577094 lBF = `1.37915` Chr`17` : `44,187,492`	0.000	0.526	0.474
rs1864325 lBF = `1.4805` Chr`17` : `43,977,827`	0.000	0.529	0.471
rs2853953 lBF = `431.525` Chr`6` : `31,235,505`	0.468	0.532	0.000
rs3131060 lBF = `106.407` Chr`6` : `30,763,291`	0.468	0.532	0.000
rs2542151 lBF = `9.18119` Chr`18` : `12,779,947`	0.000	0.534	0.466
rs2847278 lBF = `8.94212` Chr`18` : `12,778,715`	0.000	0.535	0.465
rs9276606 lBF = `218.269` Chr`6` : `32,736,695`	0.463	0.537	0.000
rs17689882 lBF = `1.46437` Chr`17` : `43,906,828`	0.000	0.537	0.462
rs28929474 lBF = `22.7086` Chr`14` : `94,844,947`	0.462	0.538	0.000
rs3094067 lBF = `91.7381` Chr`6` : `30,299,245`	0.460	0.540	0.000
rs2233956 lBF = `143.072` Chr`6` : `31,081,205`	0.459	0.540	0.000
rs7617480 lBF = `2.95875` Chr`3` : `49,210,732`	0.459	0.541	0.000
rs3132580 lBF = `109.126` Chr`6` : `30,920,124`	0.458	0.541	0.000
rs2071278 lBF = `276.169` Chr`6` : `32,165,444`	0.456	0.544	0.000
rs28929474 lBF = `23.0864` Chr`14` : `94,844,947`	0.454	0.546	0.000
rs9266772 lBF = `70.3592` Chr`6` : `31,352,113`	0.000	0.547	0.453
rs9952991 lBF = `9.1347` Chr`18` : `12,780,464`	0.000	0.547	0.453
rs7758128 lBF = `9.33586` Chr`6` : `32,345,283`	0.000	0.549	0.451
rs436582 lBF = `1.87622` Chr`9` : `118,956,668`	0.448	0.551	0.000
rs8072451 lBF = `1.45648` Chr`17` : `43,893,716`	0.000	0.555	0.445
rs9348876 lBF = `220.238` Chr`6` : `31,575,276`	0.000	0.558	0.441
rs3132581 lBF = `108.758` Chr`6` : `30,913,458`	0.440	0.559	0.000
rs6903823 lBF = `104.677` Chr`6` : `28,322,296`	0.439	0.561	0.000
rs17649553 lBF = `1.40109` Chr`17` : `43,994,648`	0.000	0.563	0.437
rs9274623 lBF = `216.471` Chr`6` : `32,635,998`	0.432	0.567	0.000
rs2066847 lBF = `9.3263` Chr`16` : `50,763,778`	0.431	0.569	0.000
rs7750641 lBF = `320.214` Chr`6` : `31,129,310`	0.429	0.570	0.000
rs62341268 lBF = `1.47038` Chr`4` : `190,224,770`	0.428	0.572	0.000
rs2732703 lBF = `1.20799` Chr`17` : `44,353,222`	0.000	0.573	0.427
rs415430 lBF = `1.20696` Chr`17` : `44,859,144`	0.426	0.574	0.000
rs7237497 lBF = `8.74734` Chr`18` : `12,777,325`	0.000	0.580	0.420
rs75891980 lBF = `1.63266` Chr`11` : `93,879,832`	0.418	0.582	0.000
rs144447022 lBF = `218.803` Chr`6` : `29,244,219`	0.415	0.585	0.000
rs1893217 lBF = `10.27` Chr`18` : `12,809,340`	0.412	0.588	0.000
rs2070600 lBF = `117.998` Chr`6` : `32,151,443`	0.000	0.591	0.409
rs3117099 lBF = `105.505` Chr`6` : `32,358,270`	0.406	0.594	0.000
rs199515 lBF = `1.16496` Chr`17` : `44,856,641`	0.404	0.596	0.000
rs602875 lBF = `350.002` Chr`6` : `32,573,629`	0.403	0.596	0.000
rs1893217 lBF = `10.0131` Chr`18` : `12,809,340`	0.402	0.597	0.000
rs2021722 lBF = `202.92` Chr`6` : `30,174,131`	0.397	0.603	0.000
rs3135363 lBF = `120.715` Chr`6` : `32,389,648`	0.393	0.606	0.000
rs3134792 lBF = `331.451` Chr`6` : `31,312,326`	0.392	0.608	0.000
rs2523809 lBF = `11.5617` Chr`6` : `29,849,619`	0.000	0.609	0.391
rs9267488 lBF = `326.254` Chr`6` : `31,514,247`	0.386	0.613	0.000
rs9257809 lBF = `228.113` Chr`6` : `29,356,331`	0.386	0.614	0.000
rs3096697 lBF = `268.674` Chr`6` : `32,134,510`	0.380	0.620	0.000
rs111945767 lBF = `280.978` Chr`6` : `32,517,045`	0.378	0.621	0.001
rs1233491 lBF = `234.111` Chr`6` : `29,461,730`	0.375	0.625	0.000
rs2273017 lBF = `152.092` Chr`6` : `32,337,630`	0.373	0.627	0.000
rs11880316 lBF = `1.17343` Chr`19` : `31,911,129`	0.000	0.645	0.355
rs3134945 lBF = `268.571` Chr`6` : `32,146,492`	0.355	0.645	0.000
rs61819372 lBF = `8.34272` Chr`1` : `114,072,110`	0.354	0.645	0.000
rs3135753 lBF = `1.18304` Chr`10` : `123,280,658`	0.354	0.645	0.000
rs2596565 lBF = `335.924` Chr`6` : `31,353,329`	0.353	0.647	0.000
rs116916924 lBF = `3.32967` Chr`11` : `48,269,422`	0.352	0.648	0.000
rs3096696 lBF = `268.682` Chr`6` : `32,122,472`	0.350	0.650	0.000
rs3130573 lBF = `243.006` Chr`6` : `31,106,268`	0.343	0.657	0.000
rs424232 lBF = `119.208` Chr`6` : `32,208,324`	0.342	0.658	0.000
rs2523607 lBF = `332.158` Chr`6` : `31,322,790`	0.335	0.665	0.000
rs2596500 lBF = `332.38` Chr`6` : `31,321,267`	0.334	0.666	0.000
rs2734583 lBF = `326.392` Chr`6` : `31,505,480`	0.334	0.666	0.000
rs9271858 lBF = `198.991` Chr`6` : `32,595,223`	0.330	0.670	0.000
rs3763309 lBF = `263.742` Chr`6` : `32,375,973`	0.000	0.675	0.325
rs601338 lBF = `22.1804` Chr`19` : `49,206,674`	0.325	0.675	0.000
rs9268856 lBF = `110.27` Chr`6` : `32,429,719`	0.324	0.676	0.000
rs601338 lBF = `23.058` Chr`19` : `49,206,674`	0.000	0.676	0.324
rs9272143 lBF = `199.033` Chr`6` : `32,600,803`	0.321	0.679	0.000
rs74434895 lBF = `7.60443` Chr`1` : `113,934,072`	0.318	0.681	0.000
rs9357155 lBF = `46.23` Chr`6` : `32,809,848`	0.315	0.685	0.000
rs2523722 lBF = `207.117` Chr`6` : `30,165,273`	0.311	0.689	0.000
rs2524276 lBF = `51.7811` Chr`6` : `31,408,265`	0.000	0.690	0.310
rs1150757 lBF = `328.977` Chr`6` : `32,029,205`	0.310	0.690	0.000
rs516246 lBF = `21.6502` Chr`19` : `49,206,172`	0.307	0.693	0.000
rs1150753 lBF = `329.049` Chr`6` : `32,059,867`	0.306	0.694	0.000
rs492602 lBF = `21.8959` Chr`19` : `49,206,417`	0.305	0.695	0.000
rs199533 lBF = `1.07275` Chr`17` : `44,828,931`	0.000	0.695	0.305
rs3129890 lBF = `102.814` Chr`6` : `32,414,273`	0.304	0.696	0.000
rs1015563 lBF = `1.19655` Chr`20` : `6,690,101`	0.303	0.696	0.000
rs9272105 lBF = `184.365` Chr`6` : `32,599,999`	0.303	0.697	0.000
rs1811197 lBF = `313.908` Chr`6` : `31,327,660`	0.299	0.701	0.000
rs3763312 lBF = `260.995` Chr`6` : `32,376,348`	0.000	0.703	0.297
rs3130284 lBF = `268.659` Chr`6` : `32,140,487`	0.296	0.704	0.000
rs55834529 lBF = `173.216` Chr`6` : `27,072,542`	0.294	0.705	0.000
rs3131379 lBF = `326.498` Chr`6` : `31,721,033`	0.291	0.709	0.000
rs76602912 lBF = `3.22657` Chr`20` : `57,459,868`	0.289	0.711	0.000
rs7207400 lBF = `2.45983` Chr`17` : `43,824,360`	0.000	0.711	0.289
rs1634726 lBF = `152.858` Chr`6` : `30,985,828`	0.286	0.714	0.000
rs389884 lBF = `329.107` Chr`6` : `31,940,897`	0.285	0.715	0.000
rs7865017 lBF = `1.30593` Chr`9` : `133,770,222`	0.000	0.716	0.284
rs16899524 lBF = `34.0141` Chr`6` : `31,362,310`	0.000	0.719	0.281
rs199443 lBF = `1.03169` Chr`17` : `44,819,565`	0.000	0.719	0.280
rs17631303 lBF = `0.812767` Chr`17` : `43,516,402`	0.000	0.726	0.274
rs11012 lBF = `0.807561` Chr`17` : `43,513,441`	0.000	0.728	0.272
rs2857281 lBF = `34.3199` Chr`6` : `31,374,262`	0.000	0.734	0.266
rs9296009 lBF = `121.402` Chr`6` : `32,114,515`	0.000	0.737	0.263
rs4324798 lBF = `213.822` Chr`6` : `28,776,117`	0.259	0.741	0.001
rs1800625 lBF = `145.036` Chr`6` : `32,152,442`	0.258	0.742	0.000
rs1270942 lBF = `330.735` Chr`6` : `31,918,860`	0.257	0.743	0.000
rs183211 lBF = `0.920565` Chr`17` : `44,788,310`	0.000	0.745	0.255
rs9303525 lBF = `0.836245` Chr`17` : `44,187,257`	0.000	0.746	0.254
rs9266629 lBF = `75.0533` Chr`6` : `31,346,822`	0.000	0.750	0.249
rs17690703 lBF = `1.36451` Chr`17` : `43,925,297`	0.000	0.750	0.249
rs176095 lBF = `242.079` Chr`6` : `32,158,319`	0.249	0.750	0.000
rs73396800 lBF = `82.3349` Chr`6` : `32,914,726`	0.248	0.752	0.000
rs34706883 lBF = `184.488` Chr`6` : `27,805,255`	0.247	0.753	0.000
rs9267531 lBF = `326.564` Chr`6` : `31,636,742`	0.247	0.753	0.000
rs35597309 lBF = `10.975` Chr`6` : `32,589,266`	0.005	0.754	0.240
rs3117582 lBF = `326.435` Chr`6` : `31,620,520`	0.244	0.756	0.000
rs2157337 lBF = `258.488` Chr`6` : `32,501,144`	0.244	0.756	0.000
rs76770395 lBF = `1.79092` Chr`5` : `169,499,663`	0.243	0.756	0.000
rs3094604 lBF = `333.202` Chr`6` : `31,434,111`	0.235	0.765	0.000
rs6906021 lBF = `165.177` Chr`6` : `32,626,311`	0.232	0.768	0.000
rs10892279 lBF = `4.40301` Chr`11` : `118,611,781`	0.000	0.768	0.232
rs2523557 lBF = `106.125` Chr`6` : `31,331,257`	0.226	0.772	0.002
rs6932590 lBF = `61.2228` Chr`6` : `27,248,931`	0.227	0.773	0.000
rs3094084 lBF = `121.977` Chr`6` : `30,947,509`	0.221	0.779	0.000
rs2395163 lBF = `260.122` Chr`6` : `32,387,809`	0.000	0.780	0.220
rs3094117 lBF = `178.215` Chr`6` : `30,737,486`	0.219	0.781	0.000
rs41266839 lBF = `168.715` Chr`6` : `26,409,890`	0.217	0.783	0.001
rs1419881 lBF = `180.745` Chr`6` : `31,130,593`	0.216	0.784	0.000
rs41268902 lBF = `94.1617` Chr`6` : `32,071,008`	0.000	0.785	0.214
rs1150754 lBF = `313.078` Chr`6` : `32,050,758`	0.214	0.786	0.000
rs13217619 lBF = `203.741` Chr`6` : `28,306,671`	0.209	0.791	0.000
rs9273401 lBF = `136.147` Chr`6` : `32,627,129`	0.002	0.792	0.205
rs199499 lBF = `0.64875` Chr`17` : `44,865,498`	0.000	0.794	0.206
rs6085661 lBF = `0.764809` Chr`20` : `6,693,128`	0.206	0.794	0.000
rs2922994 lBF = `329.558` Chr`6` : `31,335,901`	0.205	0.795	0.000
rs117451751 lBF = `0.861888` Chr`17` : `12,809,905`	0.000	0.796	0.204
rs17693963 lBF = `176.29` Chr`6` : `27,710,165`	0.202	0.797	0.001
rs73173542 lBF = `0.830828` Chr`5` : `87,810,867`	0.201	0.798	0.000
rs2732614 lBF = `0.749545` Chr`17` : `44,364,209`	0.000	0.802	0.197
rs2524005 lBF = `126.515` Chr`6` : `29,899,677`	0.197	0.803	0.000
rs1265093 lBF = `98.9414` Chr`6` : `31,107,187`	0.000	0.808	0.192
rs1480380 lBF = `87.0513` Chr`6` : `32,913,246`	0.190	0.810	0.000
rs12123821 lBF = `57.8742` Chr`1` : `152,179,152`	0.185	0.815	0.000
rs9500927 lBF = `39.1189` Chr`6` : `32,961,361`	0.178	0.822	0.000
rs79858930 lBF = `1.3229` Chr`10` : `83,047,434`	0.177	0.823	0.000
rs1302019 lBF = `0.661709` Chr`6` : `147,971,574`	0.000	0.823	0.176
rs1567865 lBF = `0.62287` Chr`20` : `47,881,967`	0.000	0.825	0.175
rs3094228 lBF = `341.324` Chr`6` : `31,429,927`	0.175	0.825	0.000
rs6927322 lBF = `31.8112` Chr`6` : `31,088,981`	0.000	0.827	0.173
rs3132935 lBF = `130.064` Chr`6` : `32,171,075`	0.172	0.828	0.000
rs7772131 lBF = `3.65035` Chr`6` : `30,795,171`	0.171	0.828	0.000
rs3077 lBF = `99.0909` Chr`6` : `33,033,022`	0.169	0.831	0.000
rs74472562 lBF = `0.709194` Chr`11` : `44,762,755`	0.166	0.834	0.000
rs12201940 lBF = `0.683139` Chr`6` : `5,859,679`	0.165	0.835	0.000
rs35106244 lBF = `17.7978` Chr`19` : `49,203,829`	0.164	0.836	0.000
rs281379 lBF = `18.1958` Chr`19` : `49,214,274`	0.164	0.836	0.000
rs2524069 lBF = `319.373` Chr`6` : `31,244,789`	0.159	0.841	0.000
rs78378222 lBF = `4.16698` Chr`17` : `7,571,752`	0.156	0.844	0.000
rs10507047 lBF = `0.729406` Chr`12` : `95,604,290`	0.156	0.844	0.000
rs422951 lBF = `152.812` Chr`6` : `32,188,383`	0.151	0.849	0.000
rs503279 lBF = `17.268` Chr`19` : `49,209,010`	0.151	0.849	0.000
rs25422 lBF = `1.24515` Chr`6` : `118,807,847`	0.000	0.850	0.150
rs12370001 lBF = `1.36352` Chr`12` : `73,044,622`	0.149	0.851	0.000
rs4455710 lBF = `272.616` Chr`6` : `32,608,858`	0.147	0.853	0.000
rs9264942 lBF = `287.796` Chr`6` : `31,274,380`	0.000	0.853	0.147
rs558702 lBF = `327.558` Chr`6` : `31,870,326`	0.146	0.854	0.000
rs6910071 lBF = `268.13` Chr`6` : `32,282,854`	0.000	0.856	0.144
rs3823355 lBF = `47.0631` Chr`6` : `29,942,083`	0.000	0.857	0.143
rs9368699 lBF = `55.2678` Chr`6` : `31,802,541`	0.000	0.859	0.141
rs73132848 lBF = `3.75019` Chr`3` : `8,806,424`	0.141	0.859	0.000
rs2516399 lBF = `23.9353` Chr`6` : `31,481,299`	0.000	0.859	0.141
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rs3131018 lBF = `147.239` Chr`6` : `31,143,582`	0.139	0.860	0.001
rs2596542 lBF = `161.701` Chr`6` : `31,366,595`	0.000	0.860	0.140
rs6904029 lBF = `47.0274` Chr`6` : `29,943,067`	0.000	0.860	0.140
rs72799290 lBF = `3.62467` Chr`16` : `84,121,289`	0.139	0.861	0.000
rs237743 lBF = `0.534242` Chr`20` : `47,903,019`	0.000	0.861	0.139
rs3806156 lBF = `152.262` Chr`6` : `32,373,698`	0.000	0.862	0.138
rs504963 lBF = `17.3106` Chr`19` : `49,208,865`	0.137	0.863	0.000
rs17201248 lBF = `18.8353` Chr`6` : `31,803,130`	0.000	0.864	0.136
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rs2071277 lBF = `153.453` Chr`6` : `32,171,683`	0.134	0.866	0.000
rs10790268 lBF = `7.2695` Chr`11` : `118,729,391`	0.132	0.868	0.000
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rs73200449 lBF = `0.659566` Chr`12` : `110,078,967`	0.129	0.871	0.000
rs73200436 lBF = `0.644277` Chr`12` : `110,062,693`	0.125	0.874	0.000
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rs78857879 lBF = `0.743816` Chr`2` : `56,135,099`	0.124	0.876	0.000
rs2855812 lBF = `331.658` Chr`6` : `31,472,720`	0.123	0.876	0.000
rs602662 lBF = `17.7299` Chr`19` : `49,206,985`	0.123	0.877	0.000
rs2076529 lBF = `182.712` Chr`6` : `32,363,955`	0.000	0.877	0.123
rs3893464 lBF = `42.8143` Chr`6` : `29,935,250`	0.122	0.878	0.000
rs9270965 lBF = `189.127` Chr`6` : `32,573,471`	0.121	0.878	0.000
rs181705462 lBF = `3.24834` Chr`6` : `31,947,027`	0.121	0.879	0.000
rs1458065 lBF = `1.2324` Chr`3` : `56,012,812`	0.000	0.881	0.119
rs16871226 lBF = `15.384` Chr`6` : `32,915,851`	0.000	0.881	0.119
rs2076530 lBF = `182.001` Chr`6` : `32,363,816`	0.000	0.882	0.118
rs3129939 lBF = `89.8505` Chr`6` : `32,336,766`	0.118	0.882	0.000
rs3763317 lBF = `354.62` Chr`6` : `32,376,788`	0.001	0.885	0.114
rs9275326 lBF = `138.024` Chr`6` : `32,666,660`	0.003	0.886	0.111
rs926070 lBF = `145.961` Chr`6` : `32,257,566`	0.113	0.887	0.001
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rs3129055 lBF = `90.0144` Chr`6` : `29,670,261`	0.108	0.892	0.000
rs429608 lBF = `25.0282` Chr`6` : `31,930,462`	0.000	0.894	0.106
rs116855070 lBF = `1.26005` Chr`6` : `137,922,391`	0.000	0.894	0.105
rs2071543 lBF = `37.4568` Chr`6` : `32,811,629`	0.105	0.895	0.000
rs641153 lBF = `37.0216` Chr`6` : `31,914,180`	0.000	0.897	0.103
rs615672 lBF = `310.82` Chr`6` : `32,574,171`	0.103	0.897	0.000
rs1794265 lBF = `8.67049` Chr`6` : `32,674,737`	0.041	0.898	0.061
rs541862 lBF = `37.2965` Chr`6` : `31,916,951`	0.000	0.903	0.097
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rs522162 lBF = `36.7828` Chr`6` : `31,919,917`	0.000	0.909	0.091
rs11625461 lBF = `0.541899` Chr`14` : `52,403,684`	0.091	0.909	0.000
rs114067101 lBF = `15.4853` Chr`6` : `32,457,960`	0.000	0.910	0.090
rs1046089 lBF = `229.724` Chr`6` : `31,602,967`	0.087	0.913	0.000
rs3132565 lBF = `200.723` Chr`6` : `31,102,964`	0.087	0.913	0.000
rs2621416 lBF = `98.6543` Chr`6` : `32,741,868`	0.000	0.914	0.086
rs7647973 lBF = `0.907866` Chr`3` : `49,510,931`	0.000	0.915	0.085
rs17433780 lBF = `0.233266` Chr`1` : `89,474,818`	0.085	0.915	0.000
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rs9263567 lBF = `298.411` Chr`6` : `31,069,527`	0.083	0.917	0.000
rs1042151 lBF = `114.667` Chr`6` : `33,048,661`	0.083	0.917	0.000
rs652888 lBF = `99.1989` Chr`6` : `31,851,234`	0.082	0.918	0.000
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rs79014439 lBF = `0.422877` Chr`6` : `24,901,861`	0.080	0.919	0.000
rs9273076 lBF = `180.89` Chr`6` : `32,612,301`	0.078	0.922	0.000
rs910049 lBF = `164.709` Chr`6` : `32,315,727`	0.077	0.922	0.000
rs2524163 lBF = `242.456` Chr`6` : `31,259,579`	0.000	0.925	0.075
rs6935053 lBF = `45.6953` Chr`6` : `29,934,163`	0.000	0.925	0.074
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rs9277555 lBF = `90.3087` Chr`6` : `33,055,605`	0.074	0.926	0.000
rs59440261 lBF = `60.6131` Chr`6` : `31,371,071`	0.000	0.926	0.073
rs7901794 lBF = `0.458254` Chr`10` : `64,877,938`	0.000	0.927	0.072
rs77492256 lBF = `0.492559` Chr`2` : `180,294,914`	0.072	0.928	0.000
rs34391416 lBF = `0.336056` Chr`11` : `831,818`	0.000	0.928	0.072
rs4899685 lBF = `5.81885` Chr`14` : `78,421,058`	0.000	0.929	0.071
rs78428368 lBF = `0.416822` Chr`4` : `164,617,481`	0.070	0.930	0.000
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rs7001413 lBF = `2.24544` Chr`8` : `75,010,233`	0.068	0.932	0.000
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rs2395029 lBF = `60.9336` Chr`6` : `31,431,780`	0.000	0.934	0.066
rs11752643 lBF = `32.4218` Chr`6` : `32,669,373`	0.000	0.934	0.066
rs4142110 lBF = `0.517582` Chr`13` : `42,754,522`	0.000	0.934	0.066
rs9271366 lBF = `176.988` Chr`6` : `32,586,854`	0.064	0.936	0.000
rs2523822 lBF = `42.1767` Chr`6` : `29,828,660`	0.000	0.936	0.063
rs75511781 lBF = `0.249713` Chr`7` : `131,323,710`	0.063	0.937	0.000
rs9275319 lBF = `116.583` Chr`6` : `32,666,295`	0.007	0.938	0.055
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rs9275563 lBF = `261.746` Chr`6` : `32,677,912`	0.000	0.938	0.062
rs1049110 lBF = `123.179` Chr`6` : `32,726,803`	0.000	0.939	0.061
rs114683528 lBF = `1.65372` Chr`6` : `28,916,835`	0.061	0.939	0.000
rs9268402 lBF = `251.035` Chr`6` : `32,341,353`	0.000	0.940	0.060
rs438475 lBF = `30.1654` Chr`6` : `32,186,245`	0.000	0.941	0.059
rs9275698 lBF = `52.9683` Chr`6` : `32,687,973`	0.058	0.942	0.000
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rs2857595 lBF = `103.529` Chr`6` : `31,568,469`	0.057	0.943	0.000
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rs805303 lBF = `228.845` Chr`6` : `31,616,366`	0.056	0.944	0.000
rs9268480 lBF = `181.93` Chr`6` : `32,363,844`	0.000	0.944	0.056
rs3817963 lBF = `179.291` Chr`6` : `32,368,087`	0.000	0.945	0.055
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rs4938573 lBF = `7.33359` Chr`11` : `118,741,842`	0.055	0.945	0.000
rs10461617 lBF = `1.31181` Chr`5` : `56,104,308`	0.053	0.946	0.000
rs76720445 lBF = `0.389604` Chr`7` : `1,792,396`	0.053	0.947	0.000
rs9268516 lBF = `181.671` Chr`6` : `32,379,489`	0.000	0.947	0.053
rs10947261 lBF = `12.3486` Chr`6` : `32,373,232`	0.000	0.947	0.053
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rs987870 lBF = `106.227` Chr`6` : `33,042,880`	0.052	0.948	0.000
rs11620399 lBF = `0.365576` Chr`13` : `48,436,925`	0.052	0.948	0.000
rs10514718 lBF = `0.403089` Chr`3` : `61,413,814`	0.000	0.948	0.052
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rs443198 lBF = `86.8324` Chr`6` : `32,190,406`	0.052	0.948	0.000
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rs404860 lBF = `34.8331` Chr`6` : `32,184,345`	0.000	0.949	0.051
rs2476601 lBF = `159.383` Chr`1` : `114,377,568`	0.000	0.949	0.050
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rs13107325 lBF = `17.3151` Chr`4` : `103,188,709`	0.049	0.951	0.000
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rs2476601 lBF = `160.809` Chr`1` : `114,377,568`	0.048	0.952	0.000
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rs2853946 lBF = `119.895` Chr`6` : `31,247,203`	0.000	0.953	0.047
rs74541420 lBF = `0.0715208` Chr`5` : `36,377,680`	0.047	0.953	0.000
rs9271117 lBF = `229.082` Chr`6` : `32,576,795`	0.046	0.954	0.001
rs4713226 lBF = `1.9174` Chr`6` : `29,434,414`	0.000	0.954	0.046
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rs9270986 lBF = `167.975` Chr`6` : `32,574,060`	0.045	0.955	0.000
rs9271060 lBF = `228.727` Chr`6` : `32,575,513`	0.044	0.955	0.001
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rs13107325 lBF = `16.8696` Chr`4` : `103,188,709`	0.044	0.956	0.000
rs9271192 lBF = `228.602` Chr`6` : `32,578,530`	0.043	0.956	0.001
rs9271100 lBF = `228.468` Chr`6` : `32,576,478`	0.043	0.956	0.001
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rs916888 lBF = `0.253409` Chr`17` : `44,863,133`	0.000	0.957	0.043
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rs9357121 lBF = `75.3051` Chr`6` : `31,240,479`	0.004	0.958	0.038
rs9271348 lBF = `278.167` Chr`6` : `32,583,742`	0.042	0.958	0.000
rs41549217 lBF = `4.91359` Chr`6` : `31,323,885`	0.040	0.960	0.000
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rs7662358 lBF = `2.65907` Chr`4` : `189,590,859`	0.000	0.960	0.040
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rs9270984 lBF = `168.705` Chr`6` : `32,573,991`	0.040	0.960	0.000
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rs10174949 lBF = `21.0115` Chr`2` : `8,442,248`	0.000	0.962	0.038
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rs6563695 lBF = `0.434881` Chr`13` : `39,903,243`	0.000	0.967	0.032
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rs9941349 lBF = `3.5588` Chr`16` : `53,825,488`	0.000	0.971	0.029
rs9357152 lBF = `223.033` Chr`6` : `32,664,960`	0.000	0.971	0.029
rs112472535 lBF = `0.315806` Chr`3` : `130,285,880`	0.029	0.971	0.000
rs11175593 lBF = `0.400423` Chr`12` : `40,601,940`	0.029	0.971	0.000
rs117411365 lBF = `1.83368` Chr`18` : `67,468,303`	0.028	0.972	0.001
rs2524079 lBF = `230.012` Chr`6` : `31,242,174`	0.000	0.972	0.028
rs9820695 lBF = `1.97201` Chr`3` : `103,331,483`	0.000	0.972	0.028
rs28408478 lBF = `0.226361` Chr`1` : `19,287,138`	0.000	0.973	0.027
rs3135388 lBF = `174.731` Chr`6` : `32,413,051`	0.027	0.973	0.000
rs115073616 lBF = `0.716089` Chr`2` : `22,668,759`	0.024	0.973	0.003
rs9296015 lBF = `24.2782` Chr`6` : `32,218,989`	0.000	0.973	0.027
rs1186300 lBF = `1.89771` Chr`12` : `17,728,991`	0.027	0.973	0.000
rs10520638 lBF = `0.214176` Chr`15` : `87,253,534`	0.026	0.973	0.000
rs3129889 lBF = `175.048` Chr`6` : `32,413,545`	0.026	0.973	0.000
rs3828840 lBF = `233.937` Chr`6` : `32,520,907`	0.026	0.974	0.001
rs12614 lBF = `2.68013` Chr`6` : `31,914,179`	0.000	0.974	0.026
rs2571391 lBF = `52.4534` Chr`6` : `29,923,838`	0.000	0.974	0.026
rs3177928 lBF = `201.269` Chr`6` : `32,412,435`	0.001	0.974	0.025
rs17086954 lBF = `0.66723` Chr`6` : `156,337,304`	0.026	0.974	0.000
rs9821642 lBF = `2.10427` Chr`3` : `103,345,439`	0.000	0.974	0.026
rs2174550 lBF = `0.121757` Chr`5` : `40,602,383`	0.026	0.974	0.000
rs76264265 lBF = `0.203023` Chr`1` : `37,309,390`	0.026	0.974	0.000
rs79335261 lBF = `0.255002` Chr`12` : `56,497,641`	0.000	0.974	0.026
rs2647050 lBF = `187.567` Chr`6` : `32,669,767`	0.000	0.975	0.025
rs2255221 lBF = `46.6596` Chr`6` : `31,431,691`	0.000	0.975	0.025
rs1046080 lBF = `126.08` Chr`6` : `31,595,882`	0.025	0.975	0.000
rs2856718 lBF = `187.542` Chr`6` : `32,670,255`	0.000	0.975	0.025
rs75672964 lBF = `0.115217` Chr`7` : `131,321,010`	0.025	0.975	0.000
rs117604355 lBF = `0.241742` Chr`16` : `82,276,031`	0.000	0.975	0.025
rs17124955 lBF = `0.224764` Chr`14` : `89,372,751`	0.025	0.975	0.000
rs471144 lBF = `29.6612` Chr`1` : `152,454,255`	0.024	0.976	0.000
rs2281388 lBF = `7.76788` Chr`6` : `33,060,118`	0.001	0.976	0.023
rs3135350 lBF = `174.663` Chr`6` : `32,392,981`	0.024	0.976	0.000
rs6720394 lBF = `1.64584` Chr`2` : `111,989,372`	0.000	0.976	0.024
rs17124372 lBF = `0.270176` Chr`20` : `31,798,437`	0.000	0.976	0.024
rs241428 lBF = `3.5704` Chr`6` : `32,804,070`	0.024	0.976	0.000
rs35518360 lBF = `10.729` Chr`4` : `103,146,890`	0.024	0.976	0.000
rs3869109 lBF = `211.3` Chr`6` : `31,184,196`	0.000	0.976	0.024
rs12422544 lBF = `0.417415` Chr`12` : `40,528,432`	0.024	0.976	0.000
rs259919 lBF = `57.7621` Chr`6` : `30,025,503`	0.024	0.976	0.000
rs7339349 lBF = `0.141172` Chr`13` : `74,556,225`	0.024	0.976	0.000
rs6120141 lBF = `0.381169` Chr`20` : `31,768,655`	0.000	0.976	0.024
rs4530903 lBF = `93.0968` Chr`6` : `32,581,889`	0.001	0.976	0.023
rs4856162 lBF = `1.81929` Chr`3` : `103,292,226`	0.000	0.976	0.023
rs2516049 lBF = `107.941` Chr`6` : `32,570,400`	0.000	0.977	0.023
rs3096702 lBF = `180.609` Chr`6` : `32,192,331`	0.023	0.977	0.000
rs1794275 lBF = `109.013` Chr`6` : `32,671,248`	0.001	0.977	0.022
rs117530360 lBF = `0.218796` Chr`16` : `1,952,972`	0.023	0.977	0.000
rs577272 lBF = `129.92` Chr`6` : `31,837,963`	0.000	0.977	0.023
rs17246404 lBF = `0.291135` Chr`7` : `124,462,661`	0.000	0.977	0.023
rs7358151 lBF = `0.214149` Chr`10` : `28,017,572`	0.022	0.977	0.000
rs7383287 lBF = `88.0053` Chr`6` : `32,783,086`	0.022	0.977	0.000
rs117932393 lBF = `0.125274` Chr`9` : `109,152,709`	0.022	0.977	0.000
rs3823418 lBF = `50.9375` Chr`6` : `31,100,942`	0.000	0.978	0.022
rs1770678 lBF = `0.40126` Chr`1` : `82,765,052`	0.022	0.978	0.000
rs77990856 lBF = `0.156982` Chr`18` : `48,016,887`	0.000	0.978	0.022
rs8176719 lBF = `101.453` Chr`9` : `136,132,908`	0.000	0.978	0.022
rs11583200 lBF = `0.194895` Chr`1` : `50,559,820`	0.000	0.978	0.022
rs13194053 lBF = `86.288` Chr`6` : `27,143,883`	0.022	0.978	0.000
rs1397924 lBF = `0.578522` Chr`3` : `103,245,092`	0.000	0.978	0.022
rs11705604 lBF = `0.242066` Chr`22` : `43,719,422`	0.000	0.978	0.022
rs58721818 lBF = `3.59687` Chr`6` : `138,243,739`	0.000	0.978	0.021
rs12316703 lBF = `0.370627` Chr`12` : `118,840,457`	0.021	0.978	0.000
rs9271588 lBF = `280.634` Chr`6` : `32,590,953`	0.001	0.979	0.021
rs9930506 lBF = `3.59487` Chr`16` : `53,830,465`	0.000	0.979	0.021
rs17216786 lBF = `0.90343` Chr`16` : `83,487,471`	0.000	0.979	0.021
rs1558902 lBF = `2.23592` Chr`16` : `53,803,574`	0.000	0.979	0.021
rs34536443 lBF = `24.7217` Chr`19` : `10,463,118`	0.002	0.979	0.019
rs1421085 lBF = `2.19593` Chr`16` : `53,800,954`	0.000	0.979	0.020
rs4149909 lBF = `0.204898` Chr`1` : `242,023,898`	0.020	0.980	0.000
rs1050529 lBF = `60.0185` Chr`6` : `31,324,615`	0.000	0.980	0.020
rs2639889 lBF = `0.836379` Chr`16` : `61,123,147`	0.000	0.980	0.020
rs2722223 lBF = `0.573838` Chr`12` : `90,233,876`	0.020	0.980	0.000
rs2859113 lBF = `168.656` Chr`6` : `32,697,785`	0.000	0.980	0.020
rs45475795 lBF = `11.6242` Chr`4` : `123,399,491`	0.018	0.980	0.001
rs17082664 lBF = `0.72518` Chr`6` : `152,738,754`	0.019	0.981	0.000
rs76595471 lBF = `0.281433` Chr`12` : `80,228,443`	0.019	0.981	0.000
rs9276370 lBF = `173.996` Chr`6` : `32,707,295`	0.000	0.981	0.019
rs117250828 lBF = `0.131838` Chr`11` : `12,193,257`	0.018	0.981	0.000
rs3781684 lBF = `0.924394` Chr`11` : `76,823,484`	0.018	0.981	0.000
rs75036812 lBF = `0.217289` Chr`20` : `48,915,715`	0.018	0.981	0.000
rs6054 lBF = `1.94729` Chr`4` : `155,489,608`	0.018	0.981	0.000
rs62033400 lBF = `1.87269` Chr`16` : `53,811,788`	0.000	0.981	0.018
rs72659626 lBF = `0.238942` Chr`8` : `72,920,433`	0.018	0.982	0.000
rs11766496 lBF = `4.89221` Chr`7` : `71,388,850`	0.018	0.982	0.000
rs17003074 lBF = `0.124095` Chr`22` : `42,817,666`	0.000	0.982	0.018
rs34536443 lBF = `28.4493` Chr`19` : `10,463,118`	0.003	0.982	0.016
rs11154851 lBF = `0.13623` Chr`6` : `136,368,005`	0.018	0.982	0.000
rs11602337 lBF = `-0.0272231` Chr`11` : `25,113,781`	0.018	0.982	0.000
rs406936 lBF = `48.745` Chr`6` : `31,933,161`	0.000	0.982	0.018
rs7193144 lBF = `1.81928` Chr`16` : `53,810,686`	0.000	0.982	0.018
rs4813802 lBF = `-0.0146202` Chr`20` : `6,699,595`	0.018	0.982	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Self-Reported Statistics (`SRS`)

Diagnostic term associations

Self-Reported Statistics (SRS)

Self-Reported Statistics (`SRS`)