TreeWAS – [Z30] Contraceptive management

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs62070016 lBF = `9.95585` Chr`17` : `9,170,659`	0.807	0.193	0.000
rs117010525 lBF = `14.7473` Chr`17` : `46,605,689`	0.697	0.303	0.000
rs75418188 lBF = `2.82841` Chr`17` : `6,945,483`	0.678	0.322	0.000
rs75493593 lBF = `2.71768` Chr`17` : `6,945,087`	0.678	0.322	0.000
rs61753150 lBF = `23.5631` Chr`17` : `15,973,774`	0.590	0.410	0.000
rs117813251 lBF = `20.0984` Chr`17` : `74,197,931`	0.582	0.418	0.000
rs16969149 lBF = `15.1993` Chr`17` : `74,640,113`	0.546	0.454	0.000
rs12600691 lBF = `11.8554` Chr`17` : `75,535,526`	0.514	0.486	0.000
rs72845883 lBF = `14.3782` Chr`17` : `61,658,297`	0.506	0.494	0.000
rs8072843 lBF = `1.06281` Chr`17` : `54,638,948`	0.505	0.495	0.000
rs117140019 lBF = `22.4153` Chr`17` : `27,396,153`	0.490	0.510	0.000
rs79665456 lBF = `13.4635` Chr`17` : `36,203,084`	0.471	0.529	0.000
rs74969489 lBF = `14.9351` Chr`17` : `45,452,257`	0.459	0.541	0.000
rs55749608 lBF = `15.2225` Chr`17` : `3,800,118`	0.441	0.559	0.000
rs143813799 lBF = `18.0084` Chr`17` : `60,023,795`	0.433	0.566	0.000
rs7221713 lBF = `15.6984` Chr`17` : `59,735,398`	0.421	0.579	0.000
rs1178422 lBF = `6.83318` Chr`17` : `5,863,924`	0.386	0.614	0.000
rs6258 lBF = `5.18323` Chr`17` : `7,534,678`	0.381	0.619	0.000
rs116996274 lBF = `16.8749` Chr`17` : `72,204,105`	0.372	0.628	0.000
rs80301618 lBF = `14.6641` Chr`17` : `70,922,471`	0.353	0.647	0.000
rs79549931 lBF = `22.7675` Chr`17` : `66,178,996`	0.346	0.654	0.000
rs118166304 lBF = `25.1727` Chr`17` : `48,951,566`	0.340	0.660	0.000
rs77542162 lBF = `16.8585` Chr`17` : `67,081,278`	0.324	0.676	0.000
rs75003023 lBF = `19.4031` Chr`17` : `75,537,040`	0.322	0.678	0.000
rs295891 lBF = `12.2585` Chr`17` : `35,117,132`	0.322	0.678	0.000
rs117337372 lBF = `13.2949` Chr`17` : `11,026,937`	0.313	0.687	0.000
rs79851078 lBF = `5.58339` Chr`17` : `30,005,058`	0.305	0.695	0.000
rs78288136 lBF = `13.1867` Chr`17` : `12,422,621`	0.294	0.706	0.000
rs12150130 lBF = `14.6179` Chr`17` : `14,117,282`	0.289	0.711	0.000
rs117174162 lBF = `17.8894` Chr`17` : `27,546,321`	0.286	0.714	0.000
rs147068743 lBF = `2.09018` Chr`17` : `1,363,475`	0.285	0.715	0.000
rs117478093 lBF = `18.0142` Chr`17` : `6,027,422`	0.282	0.717	0.000
rs78378222 lBF = `67.1003` Chr`17` : `7,571,752`	0.282	0.718	0.000
rs116920450 lBF = `24.9206` Chr`17` : `48,653,130`	0.276	0.724	0.000
rs117891146 lBF = `16.7401` Chr`17` : `77,212,307`	0.270	0.729	0.001
rs118155463 lBF = `21.1268` Chr`17` : `8,079,842`	0.268	0.732	0.000
rs116965022 lBF = `11.9178` Chr`17` : `15,764,366`	0.260	0.740	0.000
rs11652121 lBF = `15.4813` Chr`17` : `28,532,332`	0.236	0.764	0.000
rs74471121 lBF = `15.6908` Chr`17` : `6,108,771`	0.222	0.778	0.000
rs181387571 lBF = `18.0545` Chr`17` : `16,249,665`	0.211	0.789	0.000
rs2250422 lBF = `11.7971` Chr`17` : `48,351,018`	0.207	0.793	0.000
rs116847944 lBF = `14.8527` Chr`17` : `32,238,030`	0.207	0.793	0.000
rs111816999 lBF = `0.159181` Chr`17` : `6,882,443`	0.196	0.804	0.000
rs73335365 lBF = `15.72` Chr`17` : `6,140,995`	0.195	0.804	0.001
rs117024145 lBF = `17.1515` Chr`17` : `8,005,847`	0.187	0.813	0.000
rs8066099 lBF = `8.67262` Chr`17` : `14,889,925`	0.187	0.813	0.000
rs117647575 lBF = `15.1304` Chr`17` : `71,591,669`	0.177	0.823	0.000
rs62076101 lBF = `21.8133` Chr`17` : `45,882,243`	0.176	0.824	0.000
rs62086354 lBF = `9.78308` Chr`17` : `73,039,818`	0.176	0.824	0.000
rs12051658 lBF = `12.3416` Chr`17` : `34,315,633`	0.174	0.826	0.000
rs181807530 lBF = `6.07401` Chr`17` : `4,774,814`	0.170	0.829	0.000
rs58842514 lBF = `17.5944` Chr`17` : `76,367,270`	0.164	0.836	0.000
rs117156109 lBF = `29.2944` Chr`17` : `75,856,929`	0.163	0.836	0.000
rs117032670 lBF = `19.5025` Chr`17` : `7,807,438`	0.140	0.853	0.007
rs190627217 lBF = `13.7219` Chr`17` : `45,811,915`	0.145	0.855	0.001
rs7211756 lBF = `2.27651` Chr`17` : `15,899,675`	0.118	0.882	0.000
rs193042029 lBF = `0.233194` Chr`17` : `4,667,984`	0.116	0.884	0.000
rs78133126 lBF = `12.6154` Chr`17` : `16,345,753`	0.115	0.885	0.000
rs62072914 lBF = `10.3081` Chr`17` : `79,332,221`	0.108	0.892	0.000
rs2663357 lBF = `14.3146` Chr`17` : `811,874`	0.102	0.897	0.000
rs79969149 lBF = `11.2075` Chr`17` : `26,270,925`	0.092	0.907	0.000
rs117180213 lBF = `18.1114` Chr`17` : `46,070,227`	0.091	0.909	0.000
rs12943679 lBF = `7.76211` Chr`17` : `64,027,553`	0.088	0.912	0.000
rs74361281 lBF = `11.9464` Chr`17` : `14,629,706`	0.086	0.914	0.000
rs16966833 lBF = `11.2571` Chr`17` : `30,035,727`	0.081	0.919	0.000
rs76919247 lBF = `8.09768` Chr`17` : `68,333,424`	0.076	0.924	0.000
rs8067912 lBF = `0.79653` Chr`17` : `56,313,904`	0.061	0.938	0.000
rs117898740 lBF = `16.4579` Chr`17` : `78,886,505`	0.059	0.940	0.000
rs10852799 lBF = `10.56` Chr`17` : `11,522,764`	0.059	0.941	0.000
rs4788957 lBF = `12.6822` Chr`17` : `74,924,327`	0.057	0.943	0.000
rs79045038 lBF = `6.0483` Chr`17` : `66,397,041`	0.056	0.944	0.000
rs114144436 lBF = `12.5218` Chr`17` : `2,832,984`	0.053	0.947	0.000
rs142643109 lBF = `4.78759` Chr`17` : `60,387,921`	0.052	0.948	0.000
rs11571358 lBF = `14.967` Chr`17` : `6,899,106`	0.048	0.950	0.002
rs11652466 lBF = `5.34235` Chr`17` : `56,061,709`	0.048	0.952	0.000
rs79719602 lBF = `22.0554` Chr`17` : `68,033,186`	0.047	0.953	0.000
rs117843447 lBF = `14.1413` Chr`17` : `20,921,845`	0.046	0.954	0.000
rs12943829 lBF = `1.06626` Chr`17` : `70,826,404`	0.044	0.956	0.000
rs7221360 lBF = `16.9886` Chr`17` : `52,448,143`	0.035	0.961	0.004
rs147985248 lBF = `11.1689` Chr`17` : `61,615,545`	0.037	0.963	0.000
rs79124699 lBF = `7.72862` Chr`17` : `64,093,897`	0.035	0.965	0.000
rs11867410 lBF = `3.32541` Chr`17` : `64,227,363`	0.035	0.965	0.000
rs118134255 lBF = `10.2692` Chr`17` : `78,461,019`	0.034	0.966	0.000
rs859267 lBF = `0.0856619` Chr`17` : `15,826,021`	0.000	0.967	0.032
rs35850753 lBF = `52.2551` Chr`17` : `7,578,671`	0.026	0.973	0.000
rs11649743 lBF = `1.66786` Chr`17` : `36,074,979`	0.023	0.977	0.000
rs75238886 lBF = `22.8661` Chr`17` : `34,313,612`	0.022	0.978	0.000
rs117611723 lBF = `13.8737` Chr`17` : `35,913,589`	0.017	0.983	0.000
rs34289250 lBF = `9.46458` Chr`17` : `59,880,646`	0.017	0.983	0.000
rs116971837 lBF = `14.357` Chr`17` : `8,680,917`	0.016	0.984	0.000
rs186788172 lBF = `0.0152099` Chr`17` : `1,239,189`	0.015	0.985	0.000
rs78726323 lBF = `10.6127` Chr`17` : `45,944,894`	0.013	0.985	0.002
rs113937434 lBF = `20.1272` Chr`17` : `34,313,674`	0.015	0.985	0.000
rs76597414 lBF = `16.1863` Chr`17` : `72,191,445`	0.014	0.986	0.000
rs62078063 lBF = `17.445` Chr`17` : `34,286,452`	0.014	0.986	0.000
rs79446318 lBF = `8.77806` Chr`17` : `74,612,692`	0.014	0.986	0.000
rs34422007 lBF = `9.49411` Chr`17` : `40,248,644`	0.014	0.986	0.000
rs1801689 lBF = `8.10652` Chr`17` : `64,210,580`	0.013	0.987	0.000
rs17138064 lBF = `-0.0383283` Chr`17` : `35,189,091`	0.013	0.987	0.000
rs149464898 lBF = `0.0111314` Chr`17` : `78,947,333`	0.012	0.988	0.000
rs17138899 lBF = `5.85345` Chr`17` : `35,573,686`	0.012	0.988	0.000
rs79392787 lBF = `0.0415236` Chr`17` : `6,250,054`	0.011	0.989	0.000
rs71370433 lBF = `1.56699` Chr`17` : `6,197,824`	0.011	0.989	0.000
rs77697917 lBF = `0.477247` Chr`17` : `41,840,849`	0.009	0.991	0.000
rs76669440 lBF = `11.74` Chr`17` : `77,785,900`	0.009	0.991	0.000
rs61735289 lBF = `10.6259` Chr`17` : `73,747,128`	0.008	0.991	0.001
rs149969998 lBF = `0.105758` Chr`17` : `13,595,579`	0.008	0.992	0.000
rs17698922 lBF = `5.59711` Chr`17` : `64,504,409`	0.008	0.992	0.000
rs12451840 lBF = `0.364503` Chr`17` : `71,807,713`	0.008	0.992	0.000
rs77068175 lBF = `13.8412` Chr`17` : `11,117,116`	0.006	0.993	0.000
rs2315504 lBF = `-0.0661126` Chr`17` : `39,046,881`	0.000	0.993	0.007
rs76731769 lBF = `14.8647` Chr`17` : `35,063,138`	0.006	0.994	0.000
rs34145262 lBF = `0.00758998` Chr`17` : `32,880,882`	0.006	0.994	0.001
rs35042707 lBF = `15.0584` Chr`17` : `33,861,639`	0.006	0.994	0.000
rs4990638 lBF = `-0.0214831` Chr`17` : `32,972,729`	0.000	0.994	0.006
rs8753 lBF = `31.436` Chr`17` : `7,417,640`	0.005	0.994	0.000
rs77855512 lBF = `16.0644` Chr`17` : `12,141,091`	0.005	0.995	0.000
rs117451751 lBF = `9.59278` Chr`17` : `12,809,905`	0.005	0.995	0.000
rs73976923 lBF = `0.0340911` Chr`17` : `6,282,471`	0.004	0.996	0.000
rs79989254 lBF = `16.0938` Chr`17` : `63,468,858`	0.004	0.996	0.000
rs12603526 lBF = `5.55678` Chr`17` : `800,593`	0.004	0.996	0.000
rs72883103 lBF = `10.4164` Chr`17` : `74,629,898`	0.004	0.996	0.000
rs8081319 lBF = `0.0106304` Chr`17` : `35,731,081`	0.004	0.996	0.000
rs143323161 lBF = `0.00353244` Chr`17` : `66,346,556`	0.003	0.996	0.000
rs8065772 lBF = `-0.00019853` Chr`17` : `64,842,925`	0.004	0.996	0.000
rs16968377 lBF = `9.38458` Chr`17` : `36,942,396`	0.004	0.996	0.000
rs2071214 lBF = `0.0628075` Chr`17` : `76,219,591`	0.003	0.997	0.000
rs74618301 lBF = `5.19595` Chr`17` : `52,933,266`	0.003	0.997	0.000
rs12602637 lBF = `7.79106` Chr`17` : `72,766,408`	0.003	0.997	0.000
rs74976893 lBF = `0.505264` Chr`17` : `69,729,925`	0.002	0.997	0.001
rs7213234 lBF = `7.51298` Chr`17` : `36,980,163`	0.002	0.998	0.000
rs72820359 lBF = `9.17012` Chr`17` : `1,523,967`	0.002	0.998	0.000
rs117202297 lBF = `0.153791` Chr`17` : `53,769,035`	0.000	0.998	0.002
rs2005290 lBF = `0.17048` Chr`17` : `3,188,012`	0.002	0.998	0.000
rs8078051 lBF = `0.00157654` Chr`17` : `72,251,240`	0.002	0.998	0.000
rs113865542 lBF = `9.26168` Chr`17` : `77,176,256`	0.002	0.998	0.000
rs3744064 lBF = `4.44478` Chr`17` : `75,211,208`	0.001	0.998	0.001
rs11653989 lBF = `-0.00309586` Chr`17` : `75,004,213`	0.002	0.998	0.000
rs4794202 lBF = `-0.0447461` Chr`17` : `45,930,539`	0.000	0.998	0.002
rs11653545 lBF = `-0.0025595` Chr`17` : `7,512,074`	0.002	0.998	0.000
rs117616209 lBF = `0.590956` Chr`17` : `7,142,851`	0.000	0.998	0.002
rs17320971 lBF = `5.32299` Chr`17` : `40,546,917`	0.002	0.998	0.000
rs73989024 lBF = `0.00079784` Chr`17` : `48,009,469`	0.001	0.998	0.000
rs56150553 lBF = `20.6531` Chr`17` : `73,389,145`	0.002	0.998	0.000
rs117654928 lBF = `7.86182` Chr`17` : `72,690,643`	0.002	0.998	0.000
rs854625 lBF = `15.4246` Chr`17` : `34,328,461`	0.001	0.999	0.000
rs1805465 lBF = `0.666865` Chr`17` : `5,393,089`	0.001	0.999	0.000
rs312457 lBF = `0.00409176` Chr`17` : `6,940,393`	0.000	0.999	0.001
rs2716882 lBF = `-0.0045234` Chr`17` : `5,582,334`	0.001	0.999	0.000
rs72483203 lBF = `-0.0147964` Chr`17` : `30,463,885`	0.001	0.999	0.000
rs55771008 lBF = `13.6178` Chr`17` : `73,338,557`	0.001	0.999	0.000
rs4789400 lBF = `0.313519` Chr`17` : `74,997,897`	0.000	0.999	0.001
rs74986892 lBF = `9.97307` Chr`17` : `12,326,683`	0.001	0.999	0.000
rs781856 lBF = `0.0000959` Chr`17` : `3,950,224`	0.001	0.999	0.000
rs72839985 lBF = `5.55515` Chr`17` : `56,383,690`	0.001	0.999	0.000
rs2233359 lBF = `23.4181` Chr`17` : `47,286,962`	0.001	0.999	0.000
rs4273100 lBF = `0.00102974` Chr`17` : `19,153,417`	0.000	0.999	0.001
rs4790333 lBF = `-0.0403491` Chr`17` : `2,262,703`	0.001	0.999	0.000
rs79169085 lBF = `7.81341` Chr`17` : `46,297,515`	0.001	0.999	0.000
rs1008977 lBF = `9.74733` Chr`17` : `10,709,674`	0.001	0.999	0.000
rs78414518 lBF = `7.79778` Chr`17` : `7,478,402`	0.001	0.999	0.000
rs9913352 lBF = `7.55706` Chr`17` : `53,818,042`	0.001	0.999	0.000
rs16975985 lBF = `-0.0301715` Chr`17` : `68,634,065`	0.000	0.999	0.001
rs74252946 lBF = `13.4758` Chr`17` : `10,125,196`	0.001	0.999	0.000
rs16948200 lBF = `0.00011259` Chr`17` : `47,566,312`	0.001	0.999	0.000
rs140385970 lBF = `0.00003247` Chr`17` : `59,560,349`	0.000	0.999	0.001
rs7226127 lBF = `11.5848` Chr`17` : `73,959,466`	0.001	0.999	0.000
rs8178393 lBF = `0.00007991` Chr`17` : `56,340,451`	0.001	0.999	0.000
rs16973424 lBF = `0.00003852` Chr`17` : `66,904,001`	0.001	0.999	0.000
rs2306658 lBF = `0.00000242` Chr`17` : `35,306,312`	0.000	0.999	0.001
rs142991058 lBF = `0` Chr`17` : `73,046,170`	0.001	0.999	0.001
rs144460277 lBF = `0` Chr`17` : `9,075,744`	0.001	0.999	0.001
rs141829479 lBF = `0` Chr`17` : `56,305,064`	0.001	0.999	0.001
rs146255527 lBF = `0` Chr`17` : `56,950,568`	0.001	0.999	0.001
rs9899375 lBF = `0` Chr`17` : `7,811,615`	0.001	0.999	0.001
rs111786708 lBF = `0` Chr`17` : `56,289,177`	0.001	0.999	0.001
rs61744862 lBF = `0` Chr`17` : `17,068,182`	0.001	0.999	0.001
rs188840013 lBF = `0` Chr`17` : `51,992,003`	0.001	0.999	0.001
rs186171056 lBF = `0` Chr`17` : `59,606,089`	0.001	0.999	0.001
rs116284889 lBF = `0` Chr`17` : `56,316,722`	0.001	0.999	0.001
rs78507937 lBF = `0` Chr`17` : `6,987,841`	0.001	0.999	0.001
rs144908958 lBF = `0` Chr`17` : `31,532,414`	0.001	0.999	0.001
rs9904045 lBF = `0` Chr`17` : `64,051,726`	0.001	0.999	0.001
rs188757965 lBF = `0` Chr`17` : `41,119,569`	0.001	0.999	0.001
rs116372990 lBF = `0` Chr`17` : `56,310,262`	0.001	0.999	0.001
rs138387343 lBF = `0` Chr`17` : `57,060,633`	0.001	0.999	0.001
rs75041531 lBF = `0` Chr`17` : `38,393,151`	0.001	0.999	0.001
rs146873050 lBF = `0` Chr`17` : `56,291,326`	0.001	0.999	0.001
rs113203253 lBF = `0` Chr`17` : `56,348,068`	0.001	0.999	0.001
rs140543894 lBF = `0` Chr`17` : `56,289,109`	0.001	0.999	0.001
rs150758818 lBF = `0` Chr`17` : `56,324,768`	0.001	0.999	0.001
rs7210100 lBF = `0` Chr`17` : `47,436,749`	0.001	0.999	0.001
rs12949468 lBF = `0` Chr`17` : `60,593,816`	0.001	0.999	0.001
rs116885154 lBF = `-0.00001053` Chr`17` : `71,784,375`	0.001	0.999	0.000
rs12453524 lBF = `-0.00003894` Chr`17` : `66,575,117`	0.000	0.999	0.001
rs333119 lBF = `-0.00010531` Chr`17` : `4,393,498`	0.000	0.999	0.000
rs12940923 lBF = `-0.0297521` Chr`17` : `56,369,849`	0.000	0.999	0.001
rs34891485 lBF = `9.20547` Chr`17` : `40,263,458`	0.001	0.999	0.000
rs191392302 lBF = `0.0986711` Chr`17` : `39,953,961`	0.001	0.999	0.000
rs929474 lBF = `-0.0507548` Chr`17` : `68,724,036`	0.000	0.999	0.001
rs111926416 lBF = `0.0311968` Chr`17` : `71,943,575`	0.001	0.999	0.000
rs627386 lBF = `-0.0106689` Chr`17` : `47,290,795`	0.000	0.999	0.001
rs12602300 lBF = `0.00022381` Chr`17` : `68,661,635`	0.000	0.999	0.000
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rs727428 lBF = `0.234682` Chr`17` : `7,537,792`	0.000	1.000	0.000
rs1316453 lBF = `0.222152` Chr`17` : `77,410,859`	0.000	1.000	0.000
rs3096644 lBF = `0.151127` Chr`17` : `46,757,575`	0.000	1.000	0.000
rs747685 lBF = `0.0399184` Chr`17` : `775,051`	0.000	1.000	0.000
rs9894429 lBF = `0.0357377` Chr`17` : `79,596,811`	0.000	1.000	0.000
rs8081460 lBF = `0.0270756` Chr`17` : `8,965,272`	0.000	1.000	0.000
rs72634030 lBF = `0.0270474` Chr`17` : `5,272,580`	0.000	1.000	0.000
rs79692461 lBF = `0.026522` Chr`17` : `53,294,772`	0.000	1.000	0.000
rs747687 lBF = `0.0261631` Chr`17` : `775,334`	0.000	1.000	0.000
rs11867934 lBF = `0.0230859` Chr`17` : `16,933,404`	0.000	1.000	0.000
rs11653011 lBF = `-0.00273923` Chr`17` : `53,519,844`	0.000	1.000	0.000
rs7224610 lBF = `-0.0163906` Chr`17` : `53,364,788`	0.000	1.000	0.000
rs12603284 lBF = `-0.0174122` Chr`17` : `2,771,512`	0.000	1.000	0.000
rs10521233 lBF = `-0.0236424` Chr`17` : `13,559,080`	0.000	1.000	0.000
rs8178822 lBF = `-0.0324868` Chr`17` : `64,225,529`	0.000	1.000	0.000
rs8178848 lBF = `-0.0327263` Chr`17` : `64,215,623`	0.000	1.000	0.000
rs17718586 lBF = `-0.0349253` Chr`17` : `68,644,189`	0.000	1.000	0.000
rs12950363 lBF = `-0.0380149` Chr`17` : `35,015,902`	0.000	1.000	0.000
rs9899891 lBF = `-0.0393476` Chr`17` : `14,629,746`	0.000	1.000	0.000
rs1877644 lBF = `-0.0397122` Chr`17` : `11,342,608`	0.000	1.000	0.000
rs9747992 lBF = `-0.0403503` Chr`17` : `77,804,840`	0.000	1.000	0.000
rs2075555 lBF = `-0.0425031` Chr`17` : `48,274,291`	0.000	1.000	0.000
rs17513268 lBF = `-0.0430459` Chr`17` : `59,323,043`	0.000	1.000	0.000
rs3794742 lBF = `-0.0439897` Chr`17` : `76,165,548`	0.000	1.000	0.000
rs28998802 lBF = `-0.0455744` Chr`17` : `26,124,908`	0.000	1.000	0.000
rs2009196 lBF = `-0.0456618` Chr`17` : `76,870,581`	0.000	1.000	0.000
rs11891 lBF = `-0.0494558` Chr`17` : `76,988,785`	0.000	1.000	0.000
rs17645023 lBF = `-0.0505989` Chr`17` : `64,917,033`	0.000	1.000	0.000
rs2302190 lBF = `-0.0522082` Chr`17` : `56,584,508`	0.000	1.000	0.000
rs8072599 lBF = `-0.0594913` Chr`17` : `80,242,123`	0.000	1.000	0.000
rs6565681 lBF = `-0.0627288` Chr`17` : `78,348,494`	0.000	1.000	0.000
rs9892651 lBF = `-0.0651436` Chr`17` : `64,303,793`	0.000	1.000	0.000
rs16951120 lBF = `-0.0695542` Chr`17` : `50,293,638`	0.000	1.000	0.000
rs11871847 lBF = `-0.078445` Chr`17` : `69,281,766`	0.000	1.000	0.000
rs9900205 lBF = `-0.0886445` Chr`17` : `64,715,108`	0.000	1.000	0.000
rs17779747 lBF = `-0.10726` Chr`17` : `68,494,992`	0.000	1.000	0.000
rs10775360 lBF = `-0.108353` Chr`17` : `68,325,868`	0.000	1.000	0.000
rs16948048 lBF = `28.5777` Chr`17` : `47,440,466`	0.000	1.000	0.000
rs8064454 lBF = `28.4566` Chr`17` : `36,101,586`	0.000	1.000	0.000
rs11651052 lBF = `28.1116` Chr`17` : `36,102,381`	0.000	1.000	0.000
rs2005705 lBF = `18.9001` Chr`17` : `36,096,300`	0.000	1.000	0.000
rs12601991 lBF = `14.0917` Chr`17` : `36,101,633`	0.000	1.000	0.000
Affx-13929237 lBF = `9.55366` Chr`17` : `44,038,785`	0.000	1.000	0.000
rs11869286 lBF = `8.76406` Chr`17` : `37,813,856`	0.000	1.000	0.000
rs1877031 lBF = `8.48035` Chr`17` : `37,814,080`	0.000	1.000	0.000
rs8081264 lBF = `7.94459` Chr`17` : `7,235,316`	0.000	1.000	0.000
rs4795406 lBF = `6.87863` Chr`17` : `38,100,134`	0.000	1.000	0.000
rs6503525 lBF = `6.47206` Chr`17` : `38,095,174`	0.000	1.000	0.000
Affx-13927266 lBF = `6.05516` Chr`17` : `43,925,297`	0.000	1.000	0.000
rs17608766 lBF = `5.23478` Chr`17` : `45,013,271`	0.000	1.000	0.000
rs4793529 lBF = `4.52568` Chr`17` : `69,118,636`	0.000	1.000	0.000
rs2732614 lBF = `3.83853` Chr`17` : `44,364,209`	0.000	1.000	0.000
rs2072153 lBF = `3.35797` Chr`17` : `47,390,014`	0.000	1.000	0.000
rs3859192 lBF = `3.26845` Chr`17` : `38,128,648`	0.000	1.000	0.000
rs199499 lBF = `3.08366` Chr`17` : `44,865,498`	0.000	1.000	0.000
rs17610181 lBF = `2.0868` Chr`17` : `59,667,953`	0.000	1.000	0.000
rs916888 lBF = `2.00376` Chr`17` : `44,863,133`	0.000	1.000	0.000
rs7208487 lBF = `1.4986` Chr`17` : `37,543,449`	0.000	1.000	0.000
rs1877030 lBF = `1.41767` Chr`17` : `37,740,161`	0.000	1.000	0.000
rs391300 lBF = `1.03278` Chr`17` : `2,216,258`	0.000	1.000	0.000
rs34638952 lBF = `0.705046` Chr`17` : `27,537,410`	0.000	1.000	0.000
rs79404002 lBF = `0.695367` Chr`17` : `4,697,255`	0.000	1.000	0.000
rs216205 lBF = `0.627465` Chr`17` : `2,196,150`	0.000	1.000	0.000
rs11078895 lBF = `0.45687` Chr`17` : `37,401,051`	0.000	1.000	0.000
rs4065321 lBF = `0.345045` Chr`17` : `38,143,548`	0.000	1.000	0.000
rs16971217 lBF = `0.309071` Chr`17` : `33,944,055`	0.000	1.000	0.000
rs12938078 lBF = `0.273225` Chr`17` : `55,743,277`	0.000	1.000	0.000
rs2286672 lBF = `0.269317` Chr`17` : `4,712,617`	0.000	1.000	0.000
rs1625895 lBF = `0.224025` Chr`17` : `7,578,115`	0.000	1.000	0.000
rs17763769 lBF = `0.171511` Chr`17` : `68,560,789`	0.000	1.000	0.000
rs2586502 lBF = `0.14675` Chr`17` : `48,289,070`	0.000	1.000	0.000
rs12949451 lBF = `0.115812` Chr`17` : `73,032,319`	0.000	1.000	0.000
rs228769 lBF = `0.109429` Chr`17` : `42,193,185`	0.000	1.000	0.000
rs11651483 lBF = `0.103712` Chr`17` : `12,777,402`	0.000	1.000	0.000
rs4969049 lBF = `0.0997442` Chr`17` : `71,000,940`	0.000	1.000	0.000
rs1990193 lBF = `0.0651057` Chr`17` : `68,828,089`	0.000	1.000	0.000
rs2138852 lBF = `0.0595363` Chr`17` : `27,703,349`	0.000	1.000	0.000
rs708382 lBF = `0.0582183` Chr`17` : `42,442,344`	0.000	1.000	0.000
rs12051723 lBF = `0.048562` Chr`17` : `78,324,259`	0.000	1.000	0.000
rs76839023 lBF = `0.0477737` Chr`17` : `51,275,574`	0.000	1.000	0.000
rs2079742 lBF = `0.0444277` Chr`17` : `59,465,697`	0.000	1.000	0.000
rs74902201 lBF = `0.0425239` Chr`17` : `64,711,563`	0.000	1.000	0.000
rs11077773 lBF = `0.0277197` Chr`17` : `73,060,073`	0.000	1.000	0.000
rs11654964 lBF = `0.0223935` Chr`17` : `32,989,538`	0.000	1.000	0.000
rs2159292 lBF = `0.0219832` Chr`17` : `11,163,192`	0.000	1.000	0.000
rs4792192 lBF = `0.0208944` Chr`17` : `11,803,461`	0.000	1.000	0.000
rs75023836 lBF = `0.0141657` Chr`17` : `9,188,598`	0.000	1.000	0.000
rs2320952 lBF = `0.0109096` Chr`17` : `10,466,474`	0.000	1.000	0.000
rs8076739 lBF = `0.0105619` Chr`17` : `27,714,587`	0.000	1.000	0.000
rs3110643 lBF = `0.00604654` Chr`17` : `36,073,492`	0.000	1.000	0.000
rs12936361 lBF = `0.00462479` Chr`17` : `68,108,417`	0.000	1.000	0.000
rs312691 lBF = `-0.00062114` Chr`17` : `68,326,338`	0.000	1.000	0.000
rs9910816 lBF = `-0.00214457` Chr`17` : `66,344,703`	0.000	1.000	0.000
rs7214628 lBF = `-0.00332003` Chr`17` : `73,882,148`	0.000	1.000	0.000
rs2075230 lBF = `-0.00511233` Chr`17` : `7,487,108`	0.000	1.000	0.000
rs3744028 lBF = `-0.00763126` Chr`17` : `73,888,672`	0.000	1.000	0.000
rs1006703 lBF = `-0.00866852` Chr`17` : `3,865,399`	0.000	1.000	0.000
rs3785982 lBF = `-0.012349` Chr`17` : `9,090,224`	0.000	1.000	0.000
rs2935183 lBF = `-0.018225` Chr`17` : `45,607,572`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0335

log Bayes Factor = 12.3689

contains 1 variants

0.0675

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.9954

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.9883

Cluster X0122

log Bayes Factor = 219.114

contains 9 variants

0.9670

Cluster X0048

log Bayes Factor = 358.819

contains 19 variants

0.9261

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.9219

Cluster X0052

log Bayes Factor = 654.387

contains 25 variants

0.8383

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.8305

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.8294

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.8099

Cluster X0220

log Bayes Factor = 142.284

contains 7 variants

0.7927

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.7893

Cluster X0218

log Bayes Factor = 425.579

contains 18 variants

0.7234

Cluster X0150

log Bayes Factor = 861.091

contains 26 variants

0.6762

Cluster X0238

log Bayes Factor = 97.9307

contains 4 variants

0.6186

Cluster X0204

log Bayes Factor = 169.796

contains 8 variants

0.6177

Cluster X0261

log Bayes Factor = 420.614

contains 20 variants

0.6078

Cluster X0169

log Bayes Factor = 331.98

contains 16 variants

0.5951

Cluster X0146

log Bayes Factor = 686.343

contains 22 variants

0.5800

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.5705

Cluster X0098

log Bayes Factor = 246.226

contains 8 variants

0.5684

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.5402

Cluster X0142

log Bayes Factor = 295.63

contains 12 variants

0.5265

Cluster X0081

log Bayes Factor = 278.568

contains 10 variants

0.4860

Cluster X0088

log Bayes Factor = 243.609

contains 9 variants

0.4636

Cluster X0124

log Bayes Factor = 336.468

contains 13 variants

0.4622

Cluster X0041

log Bayes Factor = 306.192

contains 14 variants

0.4587

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.4451

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.4374

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.4242

Cluster X0276

log Bayes Factor = 187.108

contains 9 variants

0.4197

Cluster X0249

log Bayes Factor = 244.457

contains 11 variants

0.3935

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.3886

Cluster X0214

log Bayes Factor = 186.582

contains 8 variants

0.3857

Cluster X0152

log Bayes Factor = 331.156

contains 10 variants

0.3668

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.3664

Cluster X0315

log Bayes Factor = 42.686

contains 2 variants

0.3613

Cluster X0264

log Bayes Factor = 205.833

contains 10 variants

0.3586

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.3412

Cluster X0029

log Bayes Factor = 709.102

contains 23 variants

0.3241

Cluster X0126

log Bayes Factor = 384.432

contains 15 variants

0.3175

Cluster X0021

log Bayes Factor = 338.631

contains 13 variants

0.3144

Cluster X0013

log Bayes Factor = 548.265

contains 23 variants

0.3091

Cluster X0015

log Bayes Factor = 356.23

contains 15 variants

0.3022

Cluster X0259

log Bayes Factor = 246.237

contains 11 variants

0.2790

Cluster X0234

log Bayes Factor = 28.8983

contains 2 variants

0.2737

Cluster X0024

log Bayes Factor = 309.44

contains 13 variants

0.2715

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.2670

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.2591

Cluster X0001

log Bayes Factor = 167.541

contains 7 variants

0.2480

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.2456

Cluster X0014

log Bayes Factor = 131.677

contains 6 variants

0.2445

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.2445

Cluster X0030

log Bayes Factor = 216.364

contains 9 variants

0.2400

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.2363

Cluster X0049

log Bayes Factor = 597.061

contains 18 variants

0.2359

Cluster X0003

log Bayes Factor = 195.6

contains 8 variants

0.2327

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.2295

Cluster X0091

log Bayes Factor = 303.64

contains 12 variants

0.2249

Cluster X0089

log Bayes Factor = 308.747

contains 13 variants

0.2241

Cluster X0018

log Bayes Factor = 430.611

contains 18 variants

0.2135

Cluster X0055

log Bayes Factor = 274.911

contains 10 variants

0.2101

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.2089

Cluster X0157

log Bayes Factor = 172.957

contains 8 variants

0.2034

Cluster X0167

log Bayes Factor = 136.48

contains 6 variants

0.2034

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.2032

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.2019

Cluster X0078

log Bayes Factor = 203.49

contains 11 variants

0.2009

Cluster X0203

log Bayes Factor = 363.522

contains 11 variants

0.1995

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.1951

Cluster X0229

log Bayes Factor = 347.165

contains 13 variants

0.1941

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

0.1924

Cluster X0180

log Bayes Factor = 410.88

contains 15 variants

0.1890

Cluster X0046

log Bayes Factor = 387.972

contains 16 variants

0.1875

Cluster X0043

log Bayes Factor = 517.108

contains 20 variants

0.1864

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.1822

Cluster X0134

log Bayes Factor = 151.731

contains 8 variants

0.1816

Cluster X0110

log Bayes Factor = 721.325

contains 13 variants

0.1813

Cluster X0277

log Bayes Factor = 726.213

contains 23 variants

0.1706

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.1605

Cluster X0053

log Bayes Factor = 218.825

contains 12 variants

0.1580

Cluster X0164

log Bayes Factor = 463.793

contains 16 variants

0.1539

Cluster X0326

log Bayes Factor = 112.92

contains 5 variants

0.1510

Cluster X0074

log Bayes Factor = 353.38

contains 15 variants

0.1486

Cluster X0165

log Bayes Factor = 303.727

contains 12 variants

0.1337

Cluster X0222

log Bayes Factor = 431.582

contains 17 variants

0.1323

Cluster X0191

log Bayes Factor = 163.555

contains 8 variants

0.1320

Cluster X0050

log Bayes Factor = 397.79

contains 16 variants

0.1318

Cluster X0174

log Bayes Factor = 214.209

contains 8 variants

0.1292

Cluster X0069

log Bayes Factor = 519.392

contains 20 variants

0.1274

Cluster X0271

log Bayes Factor = 256.743

contains 10 variants

0.1267

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.1232

Cluster X0153

log Bayes Factor = 328.394

contains 11 variants

0.1203

Cluster X0102

log Bayes Factor = 99.5678

contains 5 variants

0.1199

Cluster X0148

log Bayes Factor = 315.237

contains 11 variants

0.1171

Cluster X0026

log Bayes Factor = 232.119

contains 9 variants

0.1160

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.1159

Cluster X0070

log Bayes Factor = 421.182

contains 15 variants

0.1159

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.1153

Cluster X0327

log Bayes Factor = 118.248

contains 3 variants

0.1143

Cluster X0117

log Bayes Factor = 453.246

contains 21 variants

0.1138

Cluster X0028

log Bayes Factor = 120.445

contains 7 variants

0.1113

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.1093

Cluster X0040

log Bayes Factor = 542.747

contains 16 variants

0.1080

Cluster X0170

log Bayes Factor = 264.081

contains 11 variants

0.1077

Cluster X0076

log Bayes Factor = 310.928

contains 15 variants

0.1010

Cluster X0075

log Bayes Factor = 431.344

contains 16 variants

0.1009

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.0999

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.0990

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.0989

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.0987

Cluster X0080

log Bayes Factor = 455.123

contains 21 variants

0.0968

Cluster X0005

log Bayes Factor = 282.915

contains 11 variants

0.0945

Cluster X0210

log Bayes Factor = 426.159

contains 17 variants

0.0939

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.0859

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.0857

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.0848

Cluster X0145

log Bayes Factor = 274.587

contains 11 variants

0.0843

Cluster X0213

log Bayes Factor = 405.918

contains 15 variants

0.0797

Cluster X0147

log Bayes Factor = 133.509

contains 9 variants

0.0739

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.0738

Cluster X0033

log Bayes Factor = 379.444

contains 13 variants

0.0720

Cluster X0085

log Bayes Factor = 138.902

contains 6 variants

0.0694

Cluster X0137

log Bayes Factor = 120.748

contains 4 variants

0.0675

Cluster X0077

log Bayes Factor = 571.533

contains 17 variants

0.0669

Cluster X0155

log Bayes Factor = 348.568

contains 12 variants

0.0665

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.0664

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.0642

Cluster X0082

log Bayes Factor = 496.905

contains 17 variants

0.0619

Cluster X0237

log Bayes Factor = 123.902

contains 6 variants

0.0614

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.0546

Cluster X0095

log Bayes Factor = 179.348

contains 8 variants

0.0506

Cluster X0240

log Bayes Factor = 104.862

contains 6 variants

0.0504

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Parent term	Z30-Z39 Persons encountering health services in circumstances related to reproduction
Nested terms	Z30.0 General counselling and advice on contraception Z30.1 Insertion of (intra-uterine) contraceptive device Z30.2 Sterilisation Z30.3 Menstrual extraction Z30.4 Surveillance of contraceptive drugs Z30.5 Surveillance of (intra-uterine) contraceptive device Z30.8 Other contraceptive management Z30.9 Contraceptive management, unspecified

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)