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Variant clusters
Hospitalization Episode Statistics (HES)
Genetic variants: 36,212
Diagnostic terms: × 19,155
Association results: = 693,640,860
Self-Reported Statistics (SRS)
Genetic variants: 28,458
Diagnostic terms: × 474
Association results: = 13,489,092
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Diagnostic term associations

Hospitalization Episode Statistics (HES)

J15.2
Pneumonia due to staphylococcus
Parent term
J15 Bacterial pneumonia, not elsewhere classified
What are diagnostic terms?
Variant effects

Click on a variant to see its association results.

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Genome-wide   Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Results table
Variant Risk
posterior probability
 No effect
posterior probability
 Protective
posterior probability
  
rs75660786 lBF = 15.6938   Chr15 : 96,161,741
0.652 0.348 0.000
rs4775078 lBF = 6.96311   Chr15 : 45,165,400
0.625 0.375 0.000
rs76918861 lBF = 18.3265   Chr15 : 72,847,656
0.620 0.380 0.000
rs118056006 lBF = 8.25296   Chr15 : 60,087,231
0.617 0.383 0.000
rs76954458 lBF = 13.8611   Chr15 : 35,189,409
0.585 0.415 0.000
rs72763071 lBF = 14.1776   Chr15 : 101,347,950
0.584 0.416 0.000
rs117932080 lBF = 25.9049   Chr15 : 93,875,227
0.582 0.417 0.000
rs12900158 lBF = 1.30405   Chr15 : 47,879,627
0.570 0.430 0.000
rs74651669 lBF = 14.1557   Chr15 : 87,206,617
0.558 0.442 0.000
rs2009746 lBF = 28.1293   Chr15 : 78,754,102
0.551 0.449 0.000
rs2656065 lBF = 26.5315   Chr15 : 78,750,549
0.546 0.454 0.000
rs118036322 lBF = 17.3823   Chr15 : 54,331,986
0.545 0.455 0.000
rs12101657 lBF = 11.5945   Chr15 : 49,043,765
0.541 0.459 0.000
rs28392903 lBF = 14.0654   Chr15 : 26,106,644
0.539 0.461 0.000
rs1394371 lBF = 15.6461   Chr15 : 78,724,469
0.528 0.472 0.000
rs72738736 lBF = 27.4686   Chr15 : 78,765,122
0.523 0.477 0.000
rs113223489 lBF = 11.3029   Chr15 : 64,262,688
0.522 0.477 0.000
rs116299775 lBF = 29.8285   Chr15 : 91,445,276
0.522 0.478 0.000
rs17269740 lBF = 11.1226   Chr15 : 59,998,058
0.522 0.478 0.000
rs117598275 lBF = 13.4863   Chr15 : 26,580,611
0.521 0.479 0.000
rs78236847 lBF = 19.6533   Chr15 : 33,294,717
0.517 0.483 0.000
rs79434560 lBF = 18.5118   Chr15 : 67,049,150
0.517 0.483 0.000
rs1504550 lBF = 28.0315   Chr15 : 78,766,250
0.517 0.483 0.000
rs951984 lBF = 16.3665   Chr15 : 78,720,915
0.515 0.485 0.000
rs4243084 lBF = 33.5439   Chr15 : 78,911,672
0.514 0.486 0.000
rs138570705 lBF = 3.70168   Chr15 : 44,266,730
0.514 0.486 0.000
rs16953998 lBF = 15.2931   Chr15 : 70,264,186
0.513 0.487 0.000
rs75034815 lBF = 18.297   Chr15 : 31,315,963
0.512 0.487 0.000
rs2233070 lBF = 23.8275   Chr15 : 23,889,739
0.505 0.494 0.000
rs150844304 lBF = 10.501   Chr15 : 43,726,625
0.504 0.496 0.000
rs2568494 lBF = 27.2675   Chr15 : 78,740,964
0.502 0.498 0.000
rs2656052 lBF = 27.2675   Chr15 : 78,740,932
0.502 0.498 0.000
rs2938670 lBF = 27.281   Chr15 : 78,740,688
0.502 0.498 0.000
rs117040525 lBF = 29.602   Chr15 : 36,563,570
0.502 0.498 0.000
rs72738732 lBF = 27.0931   Chr15 : 78,752,188
0.499 0.501 0.000
rs17484235 lBF = 27.2436   Chr15 : 78,761,414
0.498 0.502 0.000
rs72740964 lBF = 33.6534   Chr15 : 78,868,636
0.494 0.505 0.000
rs72738718 lBF = 27.0339   Chr15 : 78,735,438
0.494 0.506 0.000
rs55983731 lBF = 27.0981   Chr15 : 78,735,269
0.494 0.506 0.000
rs17483721 lBF = 26.7496   Chr15 : 78,733,731
0.493 0.506 0.000
rs17483686 lBF = 26.6681   Chr15 : 78,733,390
0.493 0.507 0.000
rs7181486 lBF = 27.5074   Chr15 : 78,741,618
0.493 0.507 0.000
rs17483929 lBF = 27.504   Chr15 : 78,742,376
0.493 0.507 0.000
rs56219465 lBF = 27.4857   Chr15 : 78,742,579
0.493 0.507 0.000
rs12593811 lBF = 5.9761   Chr15 : 101,721,892
0.488 0.512 0.000
rs58365910 lBF = 33.0716   Chr15 : 78,849,034
0.487 0.513 0.000
rs17484524 lBF = 27.2953   Chr15 : 78,772,676
0.487 0.513 0.000
rs75683534 lBF = 22.4278   Chr15 : 65,116,390
0.486 0.514 0.000
rs183775327 lBF = 14.3545   Chr15 : 67,274,514
0.484 0.516 0.000
rs4606657 lBF = 14.3358   Chr15 : 61,601,952
0.483 0.517 0.000
rs1834640 lBF = 8.70364   Chr15 : 48,392,165
0.482 0.518 0.000
rs72743158 lBF = 30.527   Chr15 : 78,926,445
0.477 0.523 0.000
rs17522649 lBF = 26.3622   Chr15 : 93,084,746
0.477 0.523 0.000
rs11852372 lBF = 36.0283   Chr15 : 78,801,394
0.475 0.525 0.000
rs138117236 lBF = 16.8457   Chr15 : 83,309,422
0.473 0.527 0.000
rs72738786 lBF = 35.6113   Chr15 : 78,828,086
0.472 0.528 0.000
rs72740955 lBF = 35.6443   Chr15 : 78,849,779
0.469 0.530 0.000
rs3934516 lBF = 7.69858   Chr15 : 61,603,979
0.466 0.534 0.000
rs78425542 lBF = 16.392   Chr15 : 69,399,885
0.465 0.535 0.000
rs34684276 lBF = 35.4107   Chr15 : 78,813,155
0.462 0.537 0.000
rs10519203 lBF = 35.4283   Chr15 : 78,814,046
0.461 0.539 0.000
rs117207033 lBF = 17.1989   Chr15 : 97,116,274
0.460 0.540 0.000
rs117023793 lBF = 15.2441   Chr15 : 32,065,095
0.459 0.541 0.000
rs2089162 lBF = 27.397   Chr15 : 78,739,763
0.457 0.543 0.000
rs72738704 lBF = 27.7313   Chr15 : 78,719,832
0.455 0.545 0.000
rs8036080 lBF = 3.38637   Chr15 : 41,196,384
0.455 0.545 0.000
rs951985 lBF = 28.7452   Chr15 : 78,720,923
0.454 0.546 0.000
rs8042849 lBF = 34.3643   Chr15 : 78,817,929
0.000 0.546 0.454
rs8034191 lBF = 35.1825   Chr15 : 78,806,023
0.453 0.547 0.000
rs8039449 lBF = 31.2562   Chr15 : 78,914,534
0.453 0.547 0.000
rs148060237 lBF = 12.4871   Chr15 : 72,180,440
0.453 0.547 0.000
rs138544659 lBF = 35.1469   Chr15 : 78,900,701
0.453 0.547 0.000
rs146009840 lBF = 35.6058   Chr15 : 78,906,177
0.452 0.547 0.000
rs55676755 lBF = 35.5939   Chr15 : 78,898,932
0.451 0.549 0.000
rs931794 lBF = 32.9732   Chr15 : 78,826,180
0.448 0.552 0.000
rs78275630 lBF = 11.943   Chr15 : 58,202,985
0.448 0.552 0.000
rs2036527 lBF = 35.645   Chr15 : 78,851,615
0.447 0.553 0.000
rs147144681 lBF = 35.355   Chr15 : 78,900,908
0.446 0.554 0.000
rs77603112 lBF = 33.2101   Chr15 : 47,488,446
0.444 0.556 0.000
rs8031948 lBF = 35.5145   Chr15 : 78,816,057
0.442 0.558 0.000
rs55853698 lBF = 35.1234   Chr15 : 78,857,939
0.437 0.562 0.000
rs118020484 lBF = 8.51253   Chr15 : 56,818,990
0.436 0.564 0.000
rs1916149 lBF = 16.6286   Chr15 : 38,464,431
0.432 0.568 0.000
rs144442299 lBF = 5.60539   Chr15 : 54,295,192
0.430 0.570 0.000
rs72733851 lBF = 13.422   Chr15 : 47,804,552
0.429 0.571 0.000
rs117473873 lBF = 9.65269   Chr15 : 53,024,679
0.426 0.574 0.000
rs72736802 lBF = 25.9302   Chr15 : 78,719,501
0.425 0.574 0.000
rs17483548 lBF = 26.6396   Chr15 : 78,730,313
0.425 0.575 0.000
rs17405217 lBF = 26.5269   Chr15 : 78,731,149
0.425 0.575 0.000
rs55988292 lBF = 23.2665   Chr15 : 78,936,168
0.424 0.575 0.000
rs9788721 lBF = 35.3476   Chr15 : 78,802,869
0.421 0.579 0.000
rs11858836 lBF = 29.0725   Chr15 : 78,783,277
0.420 0.580 0.000
rs72732571 lBF = 15.1337   Chr15 : 78,424,369
0.416 0.584 0.000
rs67426328 lBF = 23.1344   Chr15 : 78,934,318
0.414 0.586 0.000
rs11634027 lBF = 15.0934   Chr15 : 26,637,415
0.412 0.588 0.000
rs55958997 lBF = 29.1415   Chr15 : 78,915,872
0.411 0.589 0.000
rs62009784 lBF = 6.38483   Chr15 : 49,494,566
0.410 0.589 0.000
rs147577476 lBF = 13.9193   Chr15 : 60,432,921
0.406 0.594 0.000
rs113652541 lBF = 18.6299   Chr15 : 53,573,692
0.402 0.597 0.000
rs17486278 lBF = 34.4524   Chr15 : 78,867,482
0.399 0.601 0.000
rs140330585 lBF = 34.1551   Chr15 : 78,866,445
0.394 0.605 0.000
rs10851371 lBF = 35.9133   Chr15 : 39,224,945
0.394 0.606 0.000
rs2869548 lBF = 30.3012   Chr15 : 78,922,638
0.391 0.609 0.000
rs1317286 lBF = 34.488   Chr15 : 78,896,129
0.391 0.609 0.000
rs56390833 lBF = 34.8717   Chr15 : 78,877,381
0.387 0.613 0.000
rs17487223 lBF = 29.7655   Chr15 : 78,923,987
0.387 0.613 0.000
rs55781567 lBF = 35.7647   Chr15 : 78,857,986
0.386 0.613 0.000
rs17486195 lBF = 34.277   Chr15 : 78,865,197
0.383 0.617 0.000
rs11633958 lBF = 33.9624   Chr15 : 78,862,064
0.382 0.618 0.000
rs79774432 lBF = 14.4188   Chr15 : 38,172,034
0.377 0.623 0.000
rs691655 lBF = 19.4694   Chr15 : 50,020,318
0.376 0.624 0.000
rs16977508 lBF = 17.5006   Chr15 : 57,743,603
0.370 0.630 0.000
rs8192482 lBF = 35.1524   Chr15 : 78,886,198
0.370 0.630 0.000
rs7172118 lBF = 33.7853   Chr15 : 78,862,453
0.369 0.631 0.000
rs4887067 lBF = 35.132   Chr15 : 78,886,947
0.368 0.631 0.000
rs56077333 lBF = 35.5067   Chr15 : 78,899,003
0.365 0.634 0.000
rs951266 lBF = 34.0189   Chr15 : 78,878,541
0.362 0.638 0.000
rs56190744 lBF = 18.1608   Chr15 : 78,170,282
0.359 0.641 0.000
Affx-52173688 lBF = 17.4903   Chr15 : 99,671,741
0.343 0.656 0.000
rs16969968 lBF = 35.0833   Chr15 : 78,882,925
0.334 0.666 0.000
rs34069323 lBF = 7.33643   Chr15 : 85,187,245
0.334 0.666 0.000
rs56117933 lBF = 22.0577   Chr15 : 78,832,349
0.333 0.667 0.000
rs74752048 lBF = 15.608   Chr15 : 50,060,632
0.332 0.668 0.000
rs78820411 lBF = 24.1897   Chr15 : 26,478,903
0.327 0.673 0.000
rs12101726 lBF = 0.434619   Chr15 : 94,581,942
0.327 0.673 0.000
rs149916999 lBF = 5.74278   Chr15 : 31,408,269
0.317 0.683 0.000
rs117508732 lBF = 10.2984   Chr15 : 67,824,170
0.316 0.684 0.000
rs75312808 lBF = 17.1131   Chr15 : 47,918,724
0.310 0.690 0.000
rs117654141 lBF = 19.1486   Chr15 : 38,120,376
0.303 0.697 0.000
rs75367305 lBF = 9.30397   Chr15 : 74,511,630
0.302 0.698 0.000
rs75421114 lBF = 9.7401   Chr15 : 98,217,518
0.298 0.702 0.000
rs12909281 lBF = 12.1942   Chr15 : 33,345,389
0.293 0.707 0.000
rs4461039 lBF = 19.9477   Chr15 : 78,817,447
0.000 0.713 0.287
rs112044143 lBF = 9.4375   Chr15 : 33,800,749
0.285 0.714 0.000
rs10518960 lBF = 17.1635   Chr15 : 45,334,829
0.283 0.717 0.000
rs7181447 lBF = 19.7385   Chr15 : 78,814,567
0.000 0.718 0.282
rs7181245 lBF = 19.7337   Chr15 : 78,814,389
0.000 0.720 0.280
rs12438181 lBF = 19.7958   Chr15 : 78,812,098
0.000 0.721 0.278
rs35216196 lBF = 26.0859   Chr15 : 38,193,234
0.277 0.723 0.000
rs77457385 lBF = 15.4395   Chr15 : 69,979,587
0.277 0.723 0.000
rs7163730 lBF = 19.767   Chr15 : 78,814,681
0.000 0.723 0.277
rs61204066 lBF = 19.8116   Chr15 : 78,815,298
0.000 0.724 0.276
rs145013933 lBF = 9.5117   Chr15 : 33,091,102
0.270 0.729 0.000
rs79336250 lBF = 15.5463   Chr15 : 57,308,475
0.258 0.742 0.000
rs74850597 lBF = 17.1584   Chr15 : 98,129,804
0.258 0.742 0.000
rs1426654 lBF = 0.663903   Chr15 : 48,426,484
0.254 0.746 0.000
rs17819946 lBF = 15.2912   Chr15 : 57,428,671
0.253 0.747 0.000
rs12441426 lBF = 19.9601   Chr15 : 78,812,329
0.000 0.749 0.251
rs28498264 lBF = 18.6374   Chr15 : 78,837,673
0.000 0.751 0.249
rs7180002 lBF = 32.6488   Chr15 : 78,873,993
0.249 0.751 0.000
rs192229215 lBF = 1.12807   Chr15 : 48,048,566
0.242 0.758 0.000
rs1051730 lBF = 32.0934   Chr15 : 78,894,339
0.241 0.759 0.000
rs28502093 lBF = 12.5607   Chr15 : 78,024,644
0.239 0.760 0.000
rs59683676 lBF = 19.0249   Chr15 : 78,833,453
0.000 0.761 0.239
rs117206795 lBF = 31.2014   Chr15 : 67,270,650
0.238 0.762 0.000
rs59133824 lBF = 19.0998   Chr15 : 78,833,450
0.000 0.763 0.237
rs56331483 lBF = 8.45622   Chr15 : 38,903,824
0.235 0.765 0.000
rs77145174 lBF = 21.2117   Chr15 : 57,177,676
0.235 0.765 0.000
rs905739 lBF = 18.6441   Chr15 : 78,845,110
0.000 0.766 0.234
rs114897391 lBF = 14.311   Chr15 : 96,065,019
0.231 0.768 0.000
rs34664138 lBF = 18.8882   Chr15 : 78,831,624
0.000 0.771 0.229
rs34138960 lBF = 18.8882   Chr15 : 78,831,668
0.000 0.771 0.229
rs4575512 lBF = 12.8191   Chr15 : 97,941,122
0.229 0.771 0.000
rs7169584 lBF = 19.7428   Chr15 : 78,822,660
0.000 0.772 0.228
rs35212593 lBF = 18.8452   Chr15 : 78,831,826
0.000 0.772 0.228
rs2036534 lBF = 19.5552   Chr15 : 78,826,948
0.000 0.778 0.222
rs7164594 lBF = 20.61   Chr15 : 78,803,057
0.000 0.778 0.222
rs3813570 lBF = 18.5201   Chr15 : 78,832,832
0.000 0.780 0.220
rs57064725 lBF = 19.2808   Chr15 : 78,833,036
0.000 0.781 0.219
rs17238859 lBF = 22.6845   Chr15 : 56,957,179
0.211 0.788 0.000
rs117599750 lBF = 11.7875   Chr15 : 40,091,332
0.211 0.789 0.000
rs12438659 lBF = 19.3395   Chr15 : 78,824,924
0.000 0.790 0.210
rs12439240 lBF = 18.4763   Chr15 : 78,829,091
0.000 0.790 0.210
rs74609360 lBF = 1.8041   Chr15 : 31,540,395
0.209 0.790 0.000
rs79925068 lBF = 11.1608   Chr15 : 100,363,930
0.208 0.792 0.000
rs12441354 lBF = 19.2446   Chr15 : 78,821,016
0.000 0.796 0.204
rs28437878 lBF = 19.8604   Chr15 : 78,807,872
0.000 0.796 0.204
rs62002515 lBF = 10.786   Chr15 : 59,296,838
0.202 0.797 0.000
rs785427 lBF = 9.18741   Chr15 : 30,182,766
0.198 0.801 0.000
rs6576557 lBF = 17.711   Chr15 : 26,540,811
0.181 0.819 0.000
rs7179400 lBF = 8.3148   Chr15 : 94,739,583
0.179 0.820 0.000
rs62012778 lBF = 9.84005   Chr15 : 63,873,443
0.178 0.822 0.000
rs9788682 lBF = 16.534   Chr15 : 78,802,586
0.000 0.823 0.177
Affx-12152382 lBF = 7.18149   Chr15 : 89,745,122
0.172 0.827 0.000
rs116448368 lBF = 23.9738   Chr15 : 52,600,590
0.171 0.829 0.000
rs75905933 lBF = 1.53062   Chr15 : 31,548,996
0.171 0.829 0.000
rs1800407 lBF = 5.62045   Chr15 : 28,230,318
0.165 0.835 0.000
rs8033755 lBF = 6.27132   Chr15 : 28,381,546
0.161 0.838 0.000
rs28459338 lBF = 6.27018   Chr15 : 67,097,927
0.159 0.840 0.000
rs56062135 lBF = 22.0047   Chr15 : 67,455,630
0.155 0.845 0.000
rs578776 lBF = 12.2576   Chr15 : 78,888,400
0.000 0.847 0.153
rs12901682 lBF = 2.81371   Chr15 : 78,833,223
0.145 0.854 0.000
rs11637630 lBF = 20.2397   Chr15 : 78,899,719
0.143 0.856 0.000
rs2965324 lBF = 13.1575   Chr15 : 48,274,460
0.143 0.857 0.000
rs7183604 lBF = 20.2205   Chr15 : 78,899,213
0.143 0.857 0.000
rs76280009 lBF = 6.73436   Chr15 : 30,228,071
0.136 0.863 0.000
rs17228058 lBF = 21.7381   Chr15 : 67,450,305
0.136 0.864 0.000
rs113352275 lBF = 14.4672   Chr15 : 78,840,567
0.000 0.864 0.136
rs8192477 lBF = 10.322   Chr15 : 78,910,463
0.000 0.866 0.134
rs62020330 lBF = 7.2423   Chr15 : 50,562,847
0.133 0.867 0.000
rs8040868 lBF = 34.6813   Chr15 : 78,911,181
0.129 0.871 0.000
rs6495308 lBF = 18.9316   Chr15 : 78,907,656
0.000 0.872 0.128
rs189218934 lBF = 19.6831   Chr15 : 78,903,987
0.128 0.872 0.000
rs938682 lBF = 19.6295   Chr15 : 78,896,547
0.000 0.873 0.127
rs10851907 lBF = 34.54   Chr15 : 78,915,864
0.124 0.876 0.000
rs7171869 lBF = 19.4273   Chr15 : 78,900,909
0.122 0.877 0.000
rs72727381 lBF = 15.1333   Chr15 : 38,823,527
0.121 0.878 0.000
rs72743461 lBF = 21.8932   Chr15 : 67,441,750
0.121 0.878 0.000
rs8192478 lBF = 9.51953   Chr15 : 78,910,462
0.000 0.881 0.119
rs664172 lBF = 16.0595   Chr15 : 78,862,762
0.000 0.881 0.119
rs503464 lBF = 18.1753   Chr15 : 78,857,896
0.000 0.884 0.116
rs12900968 lBF = 10.5004   Chr15 : 58,108,764
0.115 0.885 0.000
rs3825845 lBF = 17.8544   Chr15 : 78,910,258
0.000 0.885 0.115
rs3743078 lBF = 19.1869   Chr15 : 78,894,759
0.114 0.886 0.000
rs141308780 lBF = 0.577437   Chr15 : 84,260,542
0.113 0.887 0.000
rs117803799 lBF = 13.8032   Chr15 : 59,431,200
0.110 0.890 0.000
rs7173514 lBF = 19.2089   Chr15 : 78,849,918
0.000 0.894 0.106
rs7359276 lBF = 19.2626   Chr15 : 78,892,661
0.105 0.895 0.000
rs2869045 lBF = 9.17967   Chr15 : 78,718,899
0.101 0.899 0.000
rs72744450 lBF = 6.48395   Chr15 : 66,432,798
0.101 0.899 0.000
rs4887053 lBF = 8.75008   Chr15 : 78,712,699
0.100 0.900 0.000
rs80184563 lBF = 6.16302   Chr15 : 79,151,207
0.100 0.900 0.000
rs518425 lBF = 10.5967   Chr15 : 78,883,813
0.000 0.901 0.099
rs12910916 lBF = 24.3202   Chr15 : 47,675,655
0.099 0.901 0.000
rs2869032 lBF = 8.80467   Chr15 : 78,714,561
0.099 0.901 0.000
rs17293632 lBF = 21.6143   Chr15 : 67,442,596
0.098 0.902 0.000
rs8042374 lBF = 18.7395   Chr15 : 78,908,032
0.000 0.902 0.098
rs8042059 lBF = 18.7395   Chr15 : 78,907,859
0.000 0.902 0.098
rs117458067 lBF = 15.4786   Chr15 : 61,951,318
0.096 0.904 0.000
rs8042494 lBF = 18.6762   Chr15 : 78,908,010
0.000 0.907 0.093
rs7177514 lBF = 18.6876   Chr15 : 78,907,406
0.000 0.909 0.091
rs117655850 lBF = 10.086   Chr15 : 87,222,097
0.087 0.913 0.000
rs684513 lBF = 14.0992   Chr15 : 78,858,400
0.000 0.913 0.087
rs12899351 lBF = 23.481   Chr15 : 78,792,398
0.086 0.914 0.000
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0.080 0.920 0.000
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0.000 0.930 0.070
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0.001 0.999 0.001
rs281229 lBF = 0.0001434   Chr15 : 47,718,455
0.001 0.999 0.000
rs7164035 lBF = 0.00010418   Chr15 : 58,102,241
0.001 0.999 0.000
rs8025093 lBF = 0.00007081   Chr15 : 25,602,950
0.001 0.999 0.000
rs1014922 lBF = -0.0186381   Chr15 : 95,165,580
0.001 0.999 0.000
rs3743162 lBF = 0.842466   Chr15 : 85,430,969
0.000 0.999 0.001
rs6495706 lBF = 0.333486   Chr15 : 34,976,870
0.000 0.999 0.001
rs891288 lBF = 0.00004609   Chr15 : 85,377,015
0.001 0.999 0.000
rs75393192 lBF = 0.00004102   Chr15 : 75,870,551
0.001 0.999 0.000
rs190065944 lBF = 0.0000287   Chr15 : 78,859,610
0.001 0.999 0.000
rs57017013 lBF = 0.00000415   Chr15 : 63,891,961
0.001 0.999 0.000
rs144587541 lBF = 0   Chr15 : 80,919,708
0.001 0.999 0.001
rs1378214 lBF = 0   Chr15 : 47,579,004
0.001 0.999 0.001
rs142859932 lBF = 0   Chr15 : 73,730,683
0.001 0.999 0.001
rs4775602 lBF = 0   Chr15 : 46,856,928
0.001 0.999 0.001
rs140011970 lBF = 0   Chr15 : 92,650,280
0.001 0.999 0.001
rs75646498 lBF = 0   Chr15 : 29,876,649
0.001 0.999 0.001
rs2414208 lBF = 0   Chr15 : 53,203,301
0.001 0.999 0.001
rs140526800 lBF = 0   Chr15 : 58,089,335
0.001 0.999 0.001
rs114831632 lBF = 0   Chr15 : 58,085,372
0.001 0.999 0.001
rs79238367 lBF = 0   Chr15 : 37,347,665
0.001 0.999 0.001
rs8028579 lBF = 0   Chr15 : 48,005,470
0.001 0.999 0.001
rs191299947 lBF = 0   Chr15 : 80,877,557
0.001 0.999 0.001
rs16958536 lBF = 0   Chr15 : 47,029,906
0.001 0.999 0.001
rs113870173 lBF = 0   Chr15 : 58,104,799
0.001 0.999 0.001
rs8038108 lBF = 0   Chr15 : 90,089,276
0.001 0.999 0.001
rs4775302 lBF = 0   Chr15 : 46,639,808
0.001 0.999 0.001
rs145330511 lBF = 0   Chr15 : 58,100,592
0.001 0.999 0.001
rs147415896 lBF = 0   Chr15 : 92,626,515
0.001 0.999 0.001
rs60283548 lBF = 0   Chr15 : 97,454,880
0.001 0.999 0.001

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

 
Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0335
log Bayes Factor = 12.3689
contains 1 variants
0.1657
Cluster X0338
log Bayes Factor = 26.5485
contains 1 variants
0.0801
Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0193
log Bayes Factor = 303.265
contains 16 variants
0.9959
Cluster X0074
log Bayes Factor = 353.38
contains 15 variants
0.9907
Cluster X0141
log Bayes Factor = 742.063
contains 30 variants
0.9780
Cluster X0117
log Bayes Factor = 453.246
contains 21 variants
0.9769
Cluster X0100
log Bayes Factor = 730.252
contains 26 variants
0.9695
Cluster X0050
log Bayes Factor = 397.79
contains 16 variants
0.9673
Cluster X0057
log Bayes Factor = 439.35
contains 16 variants
0.9652
Cluster X0221
log Bayes Factor = 149.378
contains 10 variants
0.9615
Cluster X0106
log Bayes Factor = 980.916
contains 30 variants
0.9596
Cluster X0052
log Bayes Factor = 654.387
contains 25 variants
0.9561
Cluster X0249
log Bayes Factor = 244.457
contains 11 variants
0.9560
Cluster X0169
log Bayes Factor = 331.98
contains 16 variants
0.9548
Cluster X0020
log Bayes Factor = 557.721
contains 18 variants
0.9521
Cluster X0227
log Bayes Factor = 249.287
contains 11 variants
0.9461
Cluster X0223
log Bayes Factor = 122.347
contains 7 variants
0.9455
Cluster X0132
log Bayes Factor = 267.393
contains 11 variants
0.9404
Cluster X0163
log Bayes Factor = 122.554
contains 6 variants
0.9366
Cluster X0084
log Bayes Factor = 433.078
contains 21 variants
0.9346
Cluster X0073
log Bayes Factor = 785.614
contains 25 variants
0.9340
Cluster X0029
log Bayes Factor = 709.102
contains 23 variants
0.9334
Cluster X0259
log Bayes Factor = 246.237
contains 11 variants
0.9327
Cluster X0087
log Bayes Factor = 894.58
contains 26 variants
0.9275
Cluster X0078
log Bayes Factor = 203.49
contains 11 variants
0.9265
Cluster X0110
log Bayes Factor = 721.325
contains 13 variants
0.9251
Cluster X0188
log Bayes Factor = 222.629
contains 14 variants
0.9246
Cluster X0059
log Bayes Factor = 922.497
contains 26 variants
0.9184
Cluster X0111
log Bayes Factor = 403.183
contains 18 variants
0.9177
Cluster X0180
log Bayes Factor = 410.88
contains 15 variants
0.9108
Cluster X0124
log Bayes Factor = 336.468
contains 13 variants
0.9098
Cluster X0024
log Bayes Factor = 309.44
contains 13 variants
0.9092
Cluster X0061
log Bayes Factor = 293.105
contains 15 variants
0.9089
Cluster X0079
log Bayes Factor = 413.803
contains 22 variants
0.8973
Cluster X0142
log Bayes Factor = 295.63
contains 12 variants
0.8963
Cluster X0072
log Bayes Factor = 1189.98
contains 37 variants
0.8953
Cluster X0123
log Bayes Factor = 382.779
contains 14 variants
0.8947
Cluster X0171
log Bayes Factor = 291.293
contains 14 variants
0.8943
Cluster X0054
log Bayes Factor = 197.338
contains 9 variants
0.8941
Cluster X0046
log Bayes Factor = 387.972
contains 16 variants
0.8918
Cluster X0076
log Bayes Factor = 310.928
contains 15 variants
0.8877
Cluster X0094
log Bayes Factor = 562.956
contains 18 variants
0.8809
Cluster X0220
log Bayes Factor = 142.284
contains 7 variants
0.8771
Cluster X0021
log Bayes Factor = 338.631
contains 13 variants
0.8757
Cluster X0170
log Bayes Factor = 264.081
contains 11 variants
0.8729
Cluster X0075
log Bayes Factor = 431.344
contains 16 variants
0.8696
Cluster X0070
log Bayes Factor = 421.182
contains 15 variants
0.8566
Cluster X0019
log Bayes Factor = 372.36
contains 16 variants
0.8533
Cluster X0133
log Bayes Factor = 224.204
contains 11 variants
0.8522
Cluster X0164
log Bayes Factor = 463.793
contains 16 variants
0.8515
Cluster X0086
log Bayes Factor = 131.002
contains 8 variants
0.8512
Cluster X0192
log Bayes Factor = 402.511
contains 14 variants
0.8510
Cluster X0146
log Bayes Factor = 686.343
contains 22 variants
0.8506
Cluster X0213
log Bayes Factor = 405.918
contains 15 variants
0.8504
Cluster X0044
log Bayes Factor = 1165.44
contains 34 variants
0.8475
Cluster X0129
log Bayes Factor = 195.809
contains 7 variants
0.8456
Cluster X0232
log Bayes Factor = 695.273
contains 23 variants
0.8436
Cluster X0069
log Bayes Factor = 519.392
contains 20 variants
0.8408
Cluster X0043
log Bayes Factor = 517.108
contains 20 variants
0.8378
Cluster X0222
log Bayes Factor = 431.582
contains 17 variants
0.8366
Cluster X0162
log Bayes Factor = 144.479
contains 9 variants
0.8325
Cluster X0053
log Bayes Factor = 218.825
contains 12 variants
0.8283
Cluster X0080
log Bayes Factor = 455.123
contains 21 variants
0.8273
Cluster X0181
log Bayes Factor = 141.396
contains 6 variants
0.8247
Cluster X0157
log Bayes Factor = 172.957
contains 8 variants
0.8220
Cluster X0287
log Bayes Factor = 33.3095
contains 4 variants
0.8206
Cluster X0048
log Bayes Factor = 358.819
contains 19 variants
0.8195
Cluster X0261
log Bayes Factor = 420.614
contains 20 variants
0.8184
Cluster X0147
log Bayes Factor = 133.509
contains 9 variants
0.8182
Cluster X0256
log Bayes Factor = 211.588
contains 9 variants
0.8172
Cluster X0083
log Bayes Factor = 351.917
contains 13 variants
0.8112
Cluster X0224
log Bayes Factor = 278.692
contains 11 variants
0.8077
Cluster X0126
log Bayes Factor = 384.432
contains 15 variants
0.8056
Cluster X0274
log Bayes Factor = 454.783
contains 18 variants
0.8044
Cluster X0118
log Bayes Factor = 91.1908
contains 5 variants
0.8023
Cluster X0091
log Bayes Factor = 303.64
contains 12 variants
0.7966
Cluster X0030
log Bayes Factor = 216.364
contains 9 variants
0.7963
Cluster X0197
log Bayes Factor = 158.582
contains 8 variants
0.7916
Cluster X0071
log Bayes Factor = 131.269
contains 6 variants
0.7913
Cluster X0109
log Bayes Factor = 257.685
contains 11 variants
0.7873
Cluster X0042
log Bayes Factor = 307.243
contains 12 variants
0.7868
Cluster X0150
log Bayes Factor = 861.091
contains 26 variants
0.7835
Cluster X0026
log Bayes Factor = 232.119
contains 9 variants
0.7828
Cluster X0095
log Bayes Factor = 179.348
contains 8 variants
0.7809
Cluster X0018
log Bayes Factor = 430.611
contains 18 variants
0.7799
Cluster X0184
log Bayes Factor = 188.416
contains 8 variants
0.7786
Cluster X0166
log Bayes Factor = 230.746
contains 8 variants
0.7773
Cluster X0140
log Bayes Factor = 164.536
contains 8 variants
0.7759
Cluster X0013
log Bayes Factor = 548.265
contains 23 variants
0.7744
Cluster X0040
log Bayes Factor = 542.747
contains 16 variants
0.7729
Cluster X0203
log Bayes Factor = 363.522
contains 11 variants
0.7697
Cluster X0154
log Bayes Factor = 282.084
contains 12 variants
0.7694
Cluster X0107
log Bayes Factor = 151.016
contains 1 variants
0.7648
Cluster X0032
log Bayes Factor = 255.737
contains 12 variants
0.7607
Cluster X0218
log Bayes Factor = 425.579
contains 18 variants
0.7591
Cluster X0077
log Bayes Factor = 571.533
contains 17 variants
0.7536
Cluster X0003
log Bayes Factor = 195.6
contains 8 variants
0.7533
Cluster X0033
log Bayes Factor = 379.444
contains 13 variants
0.7524
Cluster X0041
log Bayes Factor = 306.192
contains 14 variants
0.7520
Cluster X0047
log Bayes Factor = 378.621
contains 14 variants
0.7456
Cluster X0065
log Bayes Factor = 53.0717
contains 3 variants
0.7431
Cluster X0156
log Bayes Factor = 226.954
contains 9 variants
0.7417
Cluster X0201
log Bayes Factor = 368.049
contains 13 variants
0.7416
Cluster X0253
log Bayes Factor = 331.491
contains 13 variants
0.7413
Cluster X0248
log Bayes Factor = 254.854
contains 10 variants
0.7389
Cluster X0089
log Bayes Factor = 308.747
contains 13 variants
0.7277
Cluster X0093
log Bayes Factor = 289.878
contains 10 variants
0.7264
Cluster X0085
log Bayes Factor = 138.902
contains 6 variants
0.7261
Cluster X0152
log Bayes Factor = 331.156
contains 10 variants
0.7221
Cluster X0148
log Bayes Factor = 315.237
contains 11 variants
0.7217
Cluster X0182
log Bayes Factor = 91.4459
contains 4 variants
0.7182
Cluster X0067
log Bayes Factor = 179.381
contains 8 variants
0.7091
Cluster X0014
log Bayes Factor = 131.677
contains 6 variants
0.7086
Cluster X0271
log Bayes Factor = 256.743
contains 10 variants
0.7053
Cluster X0051
log Bayes Factor = 376.793
contains 14 variants
0.6981
Cluster X0194
log Bayes Factor = 189.9
contains 5 variants
0.6973
Cluster X0277
log Bayes Factor = 726.213
contains 23 variants
0.6947
Cluster X0229
log Bayes Factor = 347.165
contains 13 variants
0.6908
Cluster X0127
log Bayes Factor = 276.004
contains 14 variants
0.6874
Cluster X0269
log Bayes Factor = 155.455
contains 9 variants
0.6870
Cluster X0225
log Bayes Factor = 36.4143
contains 3 variants
0.6835
Cluster X0210
log Bayes Factor = 426.159
contains 17 variants
0.6835
Cluster X0049
log Bayes Factor = 597.061
contains 18 variants
0.6805
Cluster X0098
log Bayes Factor = 246.226
contains 8 variants
0.6715
Cluster X0055
log Bayes Factor = 274.911
contains 10 variants
0.6699
Cluster X0015
log Bayes Factor = 356.23
contains 15 variants
0.6670
Cluster X0208
log Bayes Factor = 40.6733
contains 2 variants
0.6560
Cluster X0039
log Bayes Factor = 463.231
contains 17 variants
0.6557
Cluster X0238
log Bayes Factor = 97.9307
contains 4 variants
0.6524
Cluster X0122
log Bayes Factor = 219.114
contains 9 variants
0.6512
Cluster X0178
log Bayes Factor = 225.6
contains 9 variants
0.6495
Cluster X0045
log Bayes Factor = 446.264
contains 16 variants
0.6492
Cluster X0244
log Bayes Factor = 122.647
contains 5 variants
0.6442
Cluster X0082
log Bayes Factor = 496.905
contains 17 variants
0.6348
Cluster X0121
log Bayes Factor = 131.08
contains 9 variants
0.6346
Cluster X0209
log Bayes Factor = 214.798
contains 8 variants
0.6339
Cluster X0131
log Bayes Factor = 143.942
contains 8 variants
0.6323
Cluster X0145
log Bayes Factor = 274.587
contains 11 variants
0.6318
Cluster X0176
log Bayes Factor = 407.797
contains 14 variants
0.6232
Cluster X0275
log Bayes Factor = 219.726
contains 10 variants
0.6220
Cluster X0185
log Bayes Factor = 84.7127
contains 6 variants
0.6174
Cluster X0234
log Bayes Factor = 28.8983
contains 2 variants
0.6161
Cluster X0212
log Bayes Factor = 300.777
contains 10 variants
0.6074
Cluster X0174
log Bayes Factor = 214.209
contains 8 variants
0.6072
Cluster X0139
log Bayes Factor = 304.555
contains 10 variants
0.6049
Cluster X0177
log Bayes Factor = 254.872
contains 10 variants
0.5902
Cluster X0327
log Bayes Factor = 118.248
contains 3 variants
0.5890
Cluster X0159
log Bayes Factor = 152.327
contains 7 variants
0.5872
Cluster X0165
log Bayes Factor = 303.727
contains 12 variants
0.5755
Cluster X0290
log Bayes Factor = 333.908
contains 13 variants
0.5703
Cluster X0088
log Bayes Factor = 243.609
contains 9 variants
0.5648
Cluster X0153
log Bayes Factor = 328.394
contains 11 variants
0.5629
Cluster X0138
log Bayes Factor = 43.7891
contains 4 variants
0.5607
Cluster X0007
log Bayes Factor = 107.567
contains 7 variants
0.5515
Cluster X0001
log Bayes Factor = 167.541
contains 7 variants
0.5509
Cluster X0263
log Bayes Factor = 240.36
contains 13 variants
0.5474
Cluster X0231
log Bayes Factor = 82.3185
contains 5 variants
0.5447
Cluster X0119
log Bayes Factor = 114.358
contains 6 variants
0.5435
Cluster X0167
log Bayes Factor = 136.48
contains 6 variants
0.5431
Cluster X0137
log Bayes Factor = 120.748
contains 4 variants
0.5405
Cluster X0264
log Bayes Factor = 205.833
contains 10 variants
0.5395
Cluster X0012
log Bayes Factor = 112.432
contains 5 variants
0.5303
Cluster X0284
log Bayes Factor = 192.532
contains 9 variants
0.5287
Cluster X0063
log Bayes Factor = 107.557
contains 5 variants
0.5280
Cluster X0161
log Bayes Factor = 609.219
contains 20 variants
0.5257
Cluster X0205
log Bayes Factor = 674.183
contains 18 variants
0.5140
Cluster X0268
log Bayes Factor = 213.591
contains 8 variants
0.5140
Cluster X0189
log Bayes Factor = 149.681
contains 5 variants
0.5140
Cluster X0155
log Bayes Factor = 348.568
contains 12 variants
0.5049
Cluster X0143
log Bayes Factor = 179.808
contains 8 variants
0.4950
Cluster X0081
log Bayes Factor = 278.568
contains 10 variants
0.4923
Cluster X0293
log Bayes Factor = 169.051
contains 7 variants
0.4915
Cluster X0283
log Bayes Factor = 162.98
contains 9 variants
0.4897
Cluster X0320
log Bayes Factor = 110.964
contains 6 variants
0.4882
Cluster X0064
log Bayes Factor = 166.06
contains 10 variants
0.4865
Cluster X0246
log Bayes Factor = 121.08
contains 5 variants
0.4651
Cluster X0214
log Bayes Factor = 186.582
contains 8 variants
0.4527
Cluster X0037
log Bayes Factor = 171.712
contains 6 variants
0.4416
Cluster X0058
log Bayes Factor = 183.199
contains 8 variants
0.4388
Cluster X0004
log Bayes Factor = 32.8452
contains 2 variants
0.4360
Cluster X0125
log Bayes Factor = 215.738
contains 7 variants
0.4301
Cluster X0068
log Bayes Factor = 127.774
contains 6 variants
0.4227
Cluster X0226
log Bayes Factor = 145.726
contains 8 variants
0.4189
Cluster X0257
log Bayes Factor = 281.184
contains 10 variants
0.3943
Cluster X0237
log Bayes Factor = 123.902
contains 6 variants
0.3886
Cluster X0204
log Bayes Factor = 169.796
contains 8 variants
0.3838
Cluster X0134
log Bayes Factor = 151.731
contains 8 variants
0.3720
Cluster X0005
log Bayes Factor = 282.915
contains 11 variants
0.3542
Cluster X0219
log Bayes Factor = 230.324
contains 15 variants
0.3229
Cluster X0326
log Bayes Factor = 112.92
contains 5 variants
0.3182
Cluster X0247
log Bayes Factor = 98.6507
contains 6 variants
0.3054
Cluster X0199
log Bayes Factor = 350.038
contains 3 variants
0.3049
Cluster X0062
log Bayes Factor = 68.7461
contains 4 variants
0.2457
Cluster X0243
log Bayes Factor = 104.974
contains 6 variants
0.2448
Cluster X0038
log Bayes Factor = 31.1234
contains 2 variants
0.2219
Cluster X0113
log Bayes Factor = 49.7598
contains 3 variants
0.2158
Cluster X0120
log Bayes Factor = 79.6695
contains 4 variants
0.1812
Cluster X0276
log Bayes Factor = 187.108
contains 9 variants
0.1144
Cluster X0273
log Bayes Factor = 109.896
contains 6 variants
0.0943
Cluster X0322
log Bayes Factor = 70.0115
contains 3 variants
0.0771
Cluster X0028
log Bayes Factor = 120.445
contains 7 variants
0.0564
 
 

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

This website was created, designed, and edited by ORCID iD iconPatrick K. Albers

The contents of TreeWAS.org are available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) with attribution (citation) required.

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