TreeWAS – [N87.1] Moderate cervical dysplasia

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs79816080 lBF = `14.832` Chr`8` : `36,420,485`	0.860	0.140	0.000
rs7001413 lBF = `5.40312` Chr`8` : `75,010,233`	0.836	0.164	0.000
rs28603047 lBF = `14.1451` Chr`8` : `108,826,197`	0.737	0.263	0.000
rs16879552 lBF = `5.16584` Chr`8` : `32,411,216`	0.674	0.326	0.000
rs186868868 lBF = `23.5439` Chr`8` : `19,863,803`	0.612	0.388	0.000
rs73210044 lBF = `15.2486` Chr`8` : `13,392,360`	0.601	0.399	0.000
rs111726812 lBF = `16.437` Chr`8` : `123,965,193`	0.592	0.408	0.000
rs4921542 lBF = `5.71395` Chr`8` : `17,205,577`	0.573	0.427	0.000
rs61729951 lBF = `15.1399` Chr`8` : `10,532,188`	0.564	0.435	0.000
rs112767144 lBF = `30.2394` Chr`8` : `134,263,916`	0.552	0.448	0.000
rs117405208 lBF = `11.2682` Chr`8` : `134,967,408`	0.543	0.457	0.000
rs11784918 lBF = `15.2667` Chr`8` : `24,457,456`	0.532	0.468	0.000
rs188420713 lBF = `2.98848` Chr`8` : `37,134,189`	0.509	0.491	0.000
rs117984108 lBF = `20.8253` Chr`8` : `22,983,095`	0.490	0.510	0.000
rs16905439 lBF = `6.71325` Chr`8` : `136,989,204`	0.435	0.565	0.000
rs35868637 lBF = `14.7865` Chr`8` : `94,743,876`	0.408	0.592	0.000
rs1441759 lBF = `22.8185` Chr`8` : `19,865,563`	0.406	0.594	0.000
rs17673138 lBF = `1.89994` Chr`8` : `32,697,958`	0.405	0.595	0.000
rs6995588 lBF = `1.80835` Chr`8` : `61,003,897`	0.398	0.602	0.000
rs113040697 lBF = `28.1855` Chr`8` : `118,185,308`	0.393	0.607	0.000
rs75417855 lBF = `21.8115` Chr`8` : `8,966,147`	0.393	0.607	0.000
rs187162159 lBF = `0.854917` Chr`8` : `25,111,606`	0.384	0.615	0.000
rs75729198 lBF = `19.6792` Chr`8` : `15,885,087`	0.384	0.616	0.000
rs142507408 lBF = `2.75227` Chr`8` : `106,455,558`	0.362	0.637	0.000
rs7833294 lBF = `1.28762` Chr`8` : `58,008,281`	0.347	0.653	0.000
rs117873316 lBF = `14.6834` Chr`8` : `135,652,254`	0.323	0.676	0.001
rs78198802 lBF = `14.2898` Chr`8` : `22,900,168`	0.301	0.699	0.000
rs80054318 lBF = `14.188` Chr`8` : `50,129,604`	0.300	0.700	0.001
rs268 lBF = `17.5199` Chr`8` : `19,813,529`	0.292	0.707	0.001
rs191939331 lBF = `1.86657` Chr`8` : `84,717,650`	0.284	0.716	0.000
rs2103225 lBF = `7.68348` Chr`8` : `77,219,328`	0.270	0.730	0.000
rs116086868 lBF = `14.4058` Chr`8` : `17,448,828`	0.265	0.735	0.000
rs80029792 lBF = `24.0731` Chr`8` : `134,781,276`	0.250	0.749	0.000
rs78714084 lBF = `18.8347` Chr`8` : `89,031,066`	0.234	0.766	0.000
rs16876083 lBF = `1.85429` Chr`8` : `29,716,261`	0.233	0.766	0.000
rs138042437 lBF = `17.9564` Chr`8` : `128,208,369`	0.229	0.771	0.000
rs145959269 lBF = `3.70784` Chr`8` : `143,357,023`	0.221	0.779	0.001
rs147368169 lBF = `2.47816` Chr`8` : `143,470,843`	0.217	0.782	0.001
rs74566133 lBF = `21.6776` Chr`8` : `134,778,342`	0.217	0.782	0.000
rs118030566 lBF = `27.3147` Chr`8` : `144,403,041`	0.214	0.785	0.000
rs75835816 lBF = `7.35402` Chr`8` : `19,885,513`	0.206	0.793	0.001
rs17423218 lBF = `17.6829` Chr`8` : `67,758,401`	0.202	0.797	0.000
rs11992011 lBF = `14.5451` Chr`8` : `4,263,916`	0.190	0.810	0.000
rs79767168 lBF = `18.8427` Chr`8` : `131,516,058`	0.181	0.818	0.001
rs479798 lBF = `14.5952` Chr`8` : `29,112,073`	0.170	0.829	0.000
rs4873403 lBF = `0.22757` Chr`8` : `50,974,319`	0.161	0.839	0.000
rs117192105 lBF = `15.7523` Chr`8` : `24,498,050`	0.154	0.846	0.000
rs187899339 lBF = `1.40307` Chr`8` : `111,118,450`	0.136	0.864	0.000
rs118053264 lBF = `15.1239` Chr`8` : `19,356,779`	0.131	0.868	0.000
rs140273521 lBF = `15.1391` Chr`8` : `136,277,752`	0.127	0.873	0.000
rs16938910 lBF = `0.223122` Chr`8` : `75,373,948`	0.120	0.880	0.000
rs79917365 lBF = `15.1303` Chr`8` : `67,459,400`	0.110	0.890	0.000
rs117531883 lBF = `20.9443` Chr`8` : `8,309,054`	0.103	0.897	0.000
rs72630661 lBF = `19.6221` Chr`8` : `38,329,982`	0.097	0.903	0.000
rs6989010 lBF = `0.220835` Chr`8` : `12,772,755`	0.096	0.904	0.000
rs79512063 lBF = `24.6388` Chr`8` : `89,533,747`	0.094	0.905	0.000
rs17372597 lBF = `15.796` Chr`8` : `125,595,153`	0.094	0.906	0.000
rs11784849 lBF = `14.957` Chr`8` : `75,144,736`	0.091	0.909	0.000
rs140355816 lBF = `6.61367` Chr`8` : `117,574,515`	0.083	0.917	0.000
rs117262625 lBF = `15.8812` Chr`8` : `21,089,037`	0.082	0.917	0.000
rs183826639 lBF = `0.489777` Chr`8` : `76,817,264`	0.069	0.931	0.000
rs188140481 lBF = `18.2034` Chr`8` : `128,191,672`	0.059	0.941	0.000
rs6601606 lBF = `0.475405` Chr`8` : `11,638,244`	0.057	0.943	0.000
rs4397449 lBF = `0.0854969` Chr`8` : `90,342,186`	0.000	0.951	0.048
rs117500008 lBF = `15.3496` Chr`8` : `101,671,045`	0.046	0.954	0.000
rs56010636 lBF = `0.0531187` Chr`8` : `96,866,349`	0.000	0.959	0.041
rs17797221 lBF = `24.1427` Chr`8` : `97,995,627`	0.041	0.959	0.000
rs75779669 lBF = `19.3932` Chr`8` : `20,955,032`	0.039	0.960	0.001
rs4872511 lBF = `0.0384953` Chr`8` : `22,400,989`	0.035	0.965	0.000
rs184060364 lBF = `1.31395` Chr`8` : `84,120,968`	0.029	0.970	0.000
rs185206099 lBF = `1.92922` Chr`8` : `6,477,298`	0.017	0.976	0.008
rs28359524 lBF = `12.4863` Chr`8` : `18,076,854`	0.023	0.977	0.000
rs2220321 lBF = `2.73724` Chr`8` : `127,911,596`	0.000	0.979	0.021
rs4871750 lBF = `2.92135` Chr`8` : `127,902,003`	0.000	0.980	0.020
rs77237430 lBF = `10.8581` Chr`8` : `117,500,622`	0.018	0.982	0.000
rs72659626 lBF = `18.2705` Chr`8` : `72,920,433`	0.016	0.983	0.000
rs7011581 lBF = `17.2432` Chr`8` : `9,000,465`	0.016	0.984	0.000
rs16902048 lBF = `13.4263` Chr`8` : `128,243,131`	0.015	0.985	0.000
rs78586881 lBF = `15.3006` Chr`8` : `37,144,739`	0.012	0.987	0.001
rs117194321 lBF = `19.8711` Chr`8` : `22,491,317`	0.012	0.988	0.000
rs72649226 lBF = `15.4053` Chr`8` : `64,550,665`	0.011	0.988	0.001
rs17829719 lBF = `15.2172` Chr`8` : `1,824,454`	0.011	0.989	0.000
rs117336177 lBF = `15.6541` Chr`8` : `66,701,846`	0.010	0.990	0.000
rs10503887 lBF = `-0.0590776` Chr`8` : `31,633,447`	0.000	0.990	0.010
rs59294057 lBF = `0.0130314` Chr`8` : `21,506,668`	0.009	0.990	0.000
rs117809070 lBF = `22.8902` Chr`8` : `67,282,208`	0.009	0.991	0.000
rs62494762 lBF = `-0.0668579` Chr`8` : `5,373,540`	0.009	0.991	0.000
rs74896277 lBF = `17.349` Chr`8` : `131,131,148`	0.009	0.991	0.000
rs7823724 lBF = `6.06735` Chr`8` : `141,404,329`	0.009	0.991	0.000
rs3115775 lBF = `0.0195883` Chr`8` : `118,707,726`	0.000	0.991	0.009
rs140707667 lBF = `0.322695` Chr`8` : `84,028,528`	0.008	0.991	0.000
rs7461897 lBF = `-0.0288878` Chr`8` : `26,894,544`	0.008	0.992	0.000
rs6586977 lBF = `0.0140925` Chr`8` : `21,156,593`	0.008	0.992	0.000
rs116951791 lBF = `8.04751` Chr`8` : `93,219,721`	0.008	0.992	0.000
rs117402109 lBF = `17.7054` Chr`8` : `108,708,382`	0.000	0.993	0.007
rs77959025 lBF = `16.9241` Chr`8` : `128,761,169`	0.007	0.993	0.000
rs117926607 lBF = `23.2066` Chr`8` : `55,468,849`	0.007	0.993	0.000
rs16887217 lBF = `0.00876989` Chr`8` : `38,004,425`	0.006	0.993	0.000
rs3748140 lBF = `15.9864` Chr`8` : `8,999,019`	0.006	0.993	0.001
rs74664674 lBF = `18.0774` Chr`8` : `105,468,730`	0.006	0.994	0.000
rs2280890 lBF = `0.00592004` Chr`8` : `22,404,840`	0.006	0.994	0.000
rs150335055 lBF = `0.00517963` Chr`8` : `9,244,264`	0.005	0.994	0.000
rs80299072 lBF = `15.8593` Chr`8` : `36,556,762`	0.005	0.995	0.000
rs75631105 lBF = `17.5459` Chr`8` : `141,449,601`	0.005	0.995	0.000
rs7459527 lBF = `0.0670646` Chr`8` : `118,909,260`	0.005	0.995	0.001
rs2351326 lBF = `12.3551` Chr`8` : `111,847,246`	0.005	0.995	0.000
rs62501302 lBF = `17.5576` Chr`8` : `50,545,426`	0.004	0.995	0.000
rs34120730 lBF = `12.3059` Chr`8` : `75,405,303`	0.005	0.995	0.000
rs117366179 lBF = `16.6572` Chr`8` : `14,733,658`	0.004	0.995	0.000
rs7819937 lBF = `0.532275` Chr`8` : `3,118,779`	0.000	0.996	0.004
rs16867579 lBF = `0.536426` Chr`8` : `102,375,267`	0.004	0.996	0.000
rs74617895 lBF = `13.7107` Chr`8` : `3,646,688`	0.004	0.996	0.000
rs1870805 lBF = `-0.10755` Chr`8` : `140,995,243`	0.004	0.996	0.000
rs75583295 lBF = `19.5736` Chr`8` : `63,596,650`	0.004	0.996	0.000
rs71522756 lBF = `14.0585` Chr`8` : `106,746,337`	0.004	0.996	0.000
rs10108669 lBF = `24.3176` Chr`8` : `108,685,885`	0.000	0.996	0.004
rs113373865 lBF = `13.4513` Chr`8` : `67,091,991`	0.004	0.996	0.000
rs117857023 lBF = `14.423` Chr`8` : `10,675,065`	0.004	0.996	0.000
rs3793427 lBF = `-0.0555615` Chr`8` : `17,143,830`	0.004	0.996	0.000
rs1594829 lBF = `-0.00694046` Chr`8` : `26,206,077`	0.000	0.996	0.004
rs12216812 lBF = `-0.0208649` Chr`8` : `82,151,747`	0.004	0.996	0.000
rs7000921 lBF = `-0.0634135` Chr`8` : `20,393,206`	0.004	0.996	0.000
rs16910714 lBF = `6.38134` Chr`8` : `140,496,702`	0.004	0.996	0.000
rs1454292 lBF = `0.028062` Chr`8` : `4,926,465`	0.000	0.996	0.004
rs72657954 lBF = `0.0302208` Chr`8` : `72,770,306`	0.003	0.996	0.000
rs117172322 lBF = `9.83651` Chr`8` : `39,522,372`	0.000	0.996	0.004
rs76115211 lBF = `-0.0328686` Chr`8` : `66,134,454`	0.000	0.996	0.004
rs28680850 lBF = `-0.07512` Chr`8` : `1,373,720`	0.004	0.996	0.000
rs118182320 lBF = `24.3873` Chr`8` : `80,951,882`	0.003	0.996	0.000
rs76670418 lBF = `10.9855` Chr`8` : `60,334,045`	0.003	0.997	0.000
rs4735738 lBF = `0.0576628` Chr`8` : `77,611,625`	0.003	0.997	0.000
rs2927021 lBF = `7.556` Chr`8` : `120,363,974`	0.003	0.997	0.000
rs16935279 lBF = `0.0089337` Chr`8` : `69,873,452`	0.003	0.997	0.000
rs1447295 lBF = `15.7554` Chr`8` : `128,485,038`	0.003	0.997	0.000
rs62495153 lBF = `7.67204` Chr`8` : `8,136,656`	0.003	0.997	0.000
rs3870371 lBF = `-0.0683153` Chr`8` : `122,697,132`	0.003	0.997	0.000
rs4736655 lBF = `0.00443393` Chr`8` : `134,350,106`	0.003	0.997	0.000
rs2882926 lBF = `-0.0585463` Chr`8` : `63,621,569`	0.003	0.997	0.000
rs17232789 lBF = `-0.0673264` Chr`8` : `122,622,500`	0.000	0.997	0.003
rs11986220 lBF = `18.5256` Chr`8` : `128,531,689`	0.000	0.997	0.003
rs28514585 lBF = `20.0653` Chr`8` : `129,636,084`	0.003	0.997	0.000
rs150639459 lBF = `11.2123` Chr`8` : `18,804,686`	0.003	0.997	0.000
rs7844647 lBF = `1.14055` Chr`8` : `34,503,776`	0.003	0.997	0.000
rs4242384 lBF = `18.3481` Chr`8` : `128,518,554`	0.003	0.997	0.000
rs10090154 lBF = `18.423` Chr`8` : `128,532,137`	0.000	0.997	0.003
rs10112574 lBF = `0.0416653` Chr`8` : `67,381,268`	0.003	0.997	0.000
rs4831760 lBF = `0.00033072` Chr`8` : `15,532,585`	0.003	0.997	0.000
rs1579834 lBF = `-0.0389399` Chr`8` : `81,813,346`	0.000	0.997	0.003
rs16893349 lBF = `16.5225` Chr`8` : `134,207,963`	0.002	0.997	0.000
rs75609241 lBF = `0.288686` Chr`8` : `29,082,285`	0.003	0.997	0.000
rs2106212 lBF = `24.403` Chr`8` : `12,569,241`	0.002	0.997	0.000
rs2741200 lBF = `0.163349` Chr`8` : `134,071,833`	0.003	0.997	0.000
rs7006742 lBF = `-0.00894551` Chr`8` : `73,236,810`	0.002	0.997	0.000
rs4242382 lBF = `18.3507` Chr`8` : `128,517,573`	0.002	0.998	0.000
rs56156301 lBF = `0.00794506` Chr`8` : `104,147,804`	0.000	0.998	0.002
rs7014346 lBF = `34.9397` Chr`8` : `128,424,792`	0.000	0.998	0.002
rs73302752 lBF = `21.6628` Chr`8` : `73,279,185`	0.002	0.998	0.000
rs2255327 lBF = `0.00267889` Chr`8` : `11,409,992`	0.002	0.998	0.000
rs4831269 lBF = `8.89457` Chr`8` : `13,898,600`	0.002	0.998	0.000
rs13270892 lBF = `-0.0278743` Chr`8` : `20,497,183`	0.000	0.998	0.002
rs2978263 lBF = `-0.00965483` Chr`8` : `30,498,859`	0.000	0.998	0.002
rs77205825 lBF = `25.6929` Chr`8` : `140,470,489`	0.002	0.998	0.000
rs12546767 lBF = `-0.0108878` Chr`8` : `126,082,565`	0.002	0.998	0.000
rs16924527 lBF = `0.0720799` Chr`8` : `59,974,175`	0.002	0.998	0.000
rs35925379 lBF = `0.00225855` Chr`8` : `144,802,456`	0.002	0.998	0.000
rs7837688 lBF = `15.6076` Chr`8` : `128,539,360`	0.002	0.998	0.000
rs2129782 lBF = `-0.0095127` Chr`8` : `89,459,234`	0.002	0.998	0.000
rs5029317 lBF = `-0.0208752` Chr`8` : `129,126,853`	0.000	0.998	0.002
rs118124984 lBF = `22.9554` Chr`8` : `106,184,779`	0.002	0.998	0.000
rs73542936 lBF = `11.6477` Chr`8` : `1,839,557`	0.002	0.998	0.000
rs4645543 lBF = `3.51242` Chr`8` : `140,496,242`	0.002	0.998	0.000
rs2407314 lBF = `0.0128268` Chr`8` : `4,078,353`	0.000	0.998	0.002
rs998731 lBF = `-0.0793837` Chr`8` : `81,095,395`	0.000	0.998	0.002
rs118061259 lBF = `-0.00006118` Chr`8` : `107,828,078`	0.002	0.998	0.000
rs76308827 lBF = `22.5688` Chr`8` : `80,264,727`	0.002	0.998	0.000
rs16872085 lBF = `0.197457` Chr`8` : `105,957,540`	0.002	0.998	0.000
rs76316943 lBF = `2.76867` Chr`8` : `117,848,307`	0.002	0.998	0.000
rs13268726 lBF = `-0.0085601` Chr`8` : `126,013,134`	0.002	0.998	0.000
rs2046315 lBF = `0.00340521` Chr`8` : `90,211,100`	0.000	0.998	0.002
rs78894544 lBF = `7.29453` Chr`8` : `138,323,083`	0.000	0.998	0.002
rs7826834 lBF = `0.00116616` Chr`8` : `62,401,962`	0.002	0.998	0.000
rs141088253 lBF = `0.00162185` Chr`8` : `5,284,296`	0.001	0.998	0.000
rs9772809 lBF = `-0.0281998` Chr`8` : `42,658,181`	0.000	0.998	0.002
rs2279590 lBF = `-0.109202` Chr`8` : `27,456,253`	0.002	0.998	0.000
rs17250031 lBF = `17.4462` Chr`8` : `75,077,959`	0.001	0.998	0.000
rs16906293 lBF = `0.00055016` Chr`8` : `137,768,892`	0.001	0.998	0.000
rs17217757 lBF = `-0.0403255` Chr`8` : `106,613,321`	0.002	0.998	0.000
rs1801177 lBF = `13.37` Chr`8` : `19,805,708`	0.001	0.998	0.000
rs4590408 lBF = `0.0164474` Chr`8` : `96,106,037`	0.002	0.998	0.000
rs17658378 lBF = `0.180638` Chr`8` : `116,394,075`	0.000	0.998	0.002
rs10875423 lBF = `-0.0410514` Chr`8` : `139,301,378`	0.000	0.998	0.002
rs5003154 lBF = `1.76117` Chr`8` : `81,986,953`	0.000	0.998	0.002
rs7835454 lBF = `2.03289` Chr`8` : `40,034,434`	0.001	0.998	0.001
rs62522179 lBF = `0.0435349` Chr`8` : `142,154,696`	0.001	0.999	0.000
rs1460163 lBF = `-0.064761` Chr`8` : `80,227,448`	0.000	0.999	0.001
rs6987665 lBF = `17.3248` Chr`8` : `67,655,175`	0.001	0.999	0.000
rs7000782 lBF = `2.68223` Chr`8` : `81,308,150`	0.000	0.999	0.001
rs2720508 lBF = `0.0204018` Chr`8` : `17,329,827`	0.001	0.999	0.001
rs79560598 lBF = `14.8051` Chr`8` : `40,540,751`	0.001	0.999	0.001
rs2936519 lBF = `0.0602152` Chr`8` : `6,639,240`	0.000	0.999	0.001
rs150281976 lBF = `0.00104432` Chr`8` : `25,131,459`	0.001	0.999	0.000
rs903027 lBF = `0.0196467` Chr`8` : `62,409,428`	0.001	0.999	0.000
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rs1393902 lBF = `1.75937` Chr`8` : `68,421,565`	0.001	0.999	0.000
rs4295623 lBF = `0.788904` Chr`8` : `11,522,784`	0.001	0.999	0.000
rs10504906 lBF = `0.0985992` Chr`8` : `92,418,628`	0.001	0.999	0.000
rs10504249 lBF = `0.015296` Chr`8` : `58,789,081`	0.000	0.999	0.000
rs118149821 lBF = `-0.00756704` Chr`8` : `85,276,067`	0.000	0.999	0.000
rs6983561 lBF = `16.9301` Chr`8` : `128,106,880`	0.000	0.999	0.000
rs10505483 lBF = `15.7887` Chr`8` : `128,125,195`	0.000	0.999	0.000
rs12679556 lBF = `0.196355` Chr`8` : `72,514,228`	0.001	0.999	0.000
rs2946504 lBF = `0.0882884` Chr`8` : `12,811,580`	0.000	0.999	0.001
rs11784536 lBF = `0.0764394` Chr`8` : `144,839,147`	0.000	0.999	0.001
rs118152978 lBF = `-0.00568444` Chr`8` : `127,353,538`	0.000	0.999	0.000
rs7833426 lBF = `-0.0117422` Chr`8` : `21,662,848`	0.000	0.999	0.000
rs77265424 lBF = `-0.0328043` Chr`8` : `5,227,102`	0.001	0.999	0.000
rs7830341 lBF = `16.3042` Chr`8` : `128,109,930`	0.000	0.999	0.000
rs12682344 lBF = `16.2953` Chr`8` : `128,106,784`	0.000	0.999	0.000
rs16901979 lBF = `15.3333` Chr`8` : `128,124,916`	0.000	0.999	0.000
rs77544976 lBF = `8.34279` Chr`8` : `143,465,481`	0.000	0.999	0.000
rs79845597 lBF = `6.34669` Chr`8` : `10,319,327`	0.001	0.999	0.000
rs1875714 lBF = `1.72401` Chr`8` : `68,427,547`	0.001	0.999	0.000
rs2859998 lBF = `0.145979` Chr`8` : `59,324,162`	0.001	0.999	0.000
rs76794758 lBF = `0.0753432` Chr`8` : `47,052,818`	0.000	0.999	0.000
rs58605417 lBF = `0.0597869` Chr`8` : `89,294,322`	0.000	0.999	0.000
rs142816172 lBF = `0.016328` Chr`8` : `3,156,220`	0.000	0.999	0.000
rs149232124 lBF = `-0.00106835` Chr`8` : `107,335,395`	0.000	0.999	0.000
rs17060993 lBF = `-0.0123407` Chr`8` : `26,922,112`	0.000	0.999	0.000
rs1442407 lBF = `-0.0522984` Chr`8` : `3,091,584`	0.001	0.999	0.000
rs1504749 lBF = `-0.055441` Chr`8` : `55,310,711`	0.001	0.999	0.000
rs10504229 lBF = `-0.0580822` Chr`8` : `58,196,495`	0.000	0.999	0.001
rs10808739 lBF = `-0.0697806` Chr`8` : `65,640,260`	0.000	0.999	0.001
rs72655627 lBF = `15.4721` Chr`8` : `55,287,974`	0.000	0.999	0.000
rs17066040 lBF = `8.08905` Chr`8` : `3,270,667`	0.000	0.999	0.000
rs7827317 lBF = `6.24435` Chr`8` : `140,985,389`	0.000	0.999	0.000
rs12056809 lBF = `5.66393` Chr`8` : `107,927,732`	0.000	0.999	0.000
rs4269515 lBF = `0.332843` Chr`8` : `107,909,009`	0.000	0.999	0.000
rs2517388 lBF = `0.210378` Chr`8` : `37,977,732`	0.001	0.999	0.000
rs189087047 lBF = `0.0259282` Chr`8` : `118,651,389`	0.000	0.999	0.000
rs7828135 lBF = `0.0246949` Chr`8` : `81,058,819`	0.000	0.999	0.000
rs1460237 lBF = `0.0194697` Chr`8` : `105,841,855`	0.000	0.999	0.000
rs2622590 lBF = `-0.0395154` Chr`8` : `56,358,274`	0.001	0.999	0.000
rs77541621 lBF = `26.0542` Chr`8` : `128,077,146`	0.000	0.999	0.000
rs10089409 lBF = `7.8989` Chr`8` : `111,665,189`	0.000	0.999	0.000
rs1296028 lBF = `2.87067` Chr`8` : `11,698,747`	0.000	0.999	0.001
rs1160133 lBF = `0.301225` Chr`8` : `59,305,290`	0.000	0.999	0.000
rs11787341 lBF = `0.0273871` Chr`8` : `19,102,564`	0.000	0.999	0.000
rs36061340 lBF = `0.0265434` Chr`8` : `101,807,230`	0.000	0.999	0.000
rs11777345 lBF = `-0.0602902` Chr`8` : `5,426,531`	0.000	0.999	0.000
rs12681792 lBF = `-0.0722975` Chr`8` : `62,054,463`	0.000	0.999	0.000
rs2271920 lBF = `-0.0756172` Chr`8` : `27,316,117`	0.000	0.999	0.000
rs56109708 lBF = `17.2043` Chr`8` : `140,438,978`	0.000	1.000	0.000
rs17727296 lBF = `13.2947` Chr`8` : `72,558,829`	0.000	1.000	0.000
rs11985561 lBF = `0.34567` Chr`8` : `3,452,262`	0.000	1.000	0.000
rs117628011 lBF = `0.242073` Chr`8` : `76,319,166`	0.000	1.000	0.000
rs2638663 lBF = `0.0226118` Chr`8` : `18,673,731`	0.000	1.000	0.000
rs62480124 lBF = `-0.00312859` Chr`8` : `3,778,636`	0.000	1.000	0.000
rs6999859 lBF = `-0.00609449` Chr`8` : `80,691,469`	0.000	1.000	0.000
rs11994937 lBF = `-0.0126183` Chr`8` : `59,508,580`	0.000	1.000	0.000
rs7011507 lBF = `-0.0303419` Chr`8` : `49,129,242`	0.000	1.000	0.000
rs7003257 lBF = `-0.0304051` Chr`8` : `68,613,390`	0.000	1.000	0.000
rs10481151 lBF = `-0.0472283` Chr`8` : `124,831,834`	0.000	1.000	0.000
rs16910486 lBF = `-0.0606078` Chr`8` : `140,352,359`	0.000	1.000	0.000
rs1395804 lBF = `-0.0661562` Chr`8` : `132,510,680`	0.000	1.000	0.000
rs4416828 lBF = `6.22936` Chr`8` : `24,468,982`	0.000	1.000	0.000
rs896854 lBF = `0.188603` Chr`8` : `95,960,511`	0.000	1.000	0.000
rs77378271 lBF = `0.165864` Chr`8` : `3,073,489`	0.000	1.000	0.000
rs7004484 lBF = `0.0286376` Chr`8` : `132,934,538`	0.000	1.000	0.000
rs17057051 lBF = `0.0233128` Chr`8` : `27,227,554`	0.000	1.000	0.000
rs1469039 lBF = `-0.0366272` Chr`8` : `140,651,779`	0.000	1.000	0.000
rs74834049 lBF = `-0.041421` Chr`8` : `13,029,877`	0.000	1.000	0.000
rs12677663 lBF = `-0.054517` Chr`8` : `74,007,347`	0.000	1.000	0.000
rs7017212 lBF = `-0.0777989` Chr`8` : `10,022,938`	0.000	1.000	0.000
rs6577655 lBF = `-0.0824192` Chr`8` : `135,593,725`	0.000	1.000	0.000
rs12155789 lBF = `-0.0968561` Chr`8` : `22,643,707`	0.000	1.000	0.000
rs77119043 lBF = `15.2787` Chr`8` : `48,313,295`	0.000	1.000	0.000
rs1059611 lBF = `3.30576` Chr`8` : `19,824,563`	0.000	1.000	0.000
rs149038799 lBF = `3.1664` Chr`8` : `123,458,462`	0.000	1.000	0.000
rs2898261 lBF = `1.10657` Chr`8` : `10,958,539`	0.000	1.000	0.000
rs10108684 lBF = `0.0286393` Chr`8` : `123,973,068`	0.000	1.000	0.000
rs74335301 lBF = `0.0262679` Chr`8` : `116,638,637`	0.000	1.000	0.000
rs9772881 lBF = `0.00326542` Chr`8` : `142,878,259`	0.000	1.000	0.000
rs6990255 lBF = `-0.0284721` Chr`8` : `34,126,948`	0.000	1.000	0.000
rs2860223 lBF = `-0.0335866` Chr`8` : `134,668,677`	0.000	1.000	0.000
rs7008026 lBF = `-0.0355462` Chr`8` : `70,950,280`	0.000	1.000	0.000
rs36056951 lBF = `-0.0362417` Chr`8` : `139,965,798`	0.000	1.000	0.000
rs75200691 lBF = `-0.0532288` Chr`8` : `13,054,869`	0.000	1.000	0.000
rs10505477 lBF = `58.5637` Chr`8` : `128,407,443`	0.000	1.000	0.000
rs13266556 lBF = `7.6967` Chr`8` : `85,657,036`	0.000	1.000	0.000
rs4642619 lBF = `1.51359` Chr`8` : `111,487,468`	0.000	1.000	0.000
rs36068923 lBF = `1.50278` Chr`8` : `111,485,761`	0.000	1.000	0.000
rs2623702 lBF = `0.390489` Chr`8` : `3,594,906`	0.000	1.000	0.000
rs72725879 lBF = `0.286854` Chr`8` : `128,103,969`	0.000	1.000	0.000
rs10086568 lBF = `0.258841` Chr`8` : `6,900,336`	0.000	1.000	0.000
rs2045966 lBF = `0.188035` Chr`8` : `98,594,154`	0.000	1.000	0.000
rs11773966 lBF = `0.0171022` Chr`8` : `54,555,200`	0.000	1.000	0.000
rs150432060 lBF = `0.00833644` Chr`8` : `4,087,035`	0.000	1.000	0.000
rs182934215 lBF = `-0.00154347` Chr`8` : `10,434,142`	0.000	1.000	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.8855

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.7970

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.7870

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.5333

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.5115

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.5065

Cluster X0154

log Bayes Factor = 282.084

contains 12 variants

0.4142

Cluster X0120

log Bayes Factor = 79.6695

contains 4 variants

0.3981

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.3772

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.3367

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.2927

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.2906

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.2678

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.2505

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.2498

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.2449

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.2386

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.1808

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.1737

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.1608

Cluster X0019

log Bayes Factor = 372.36

contains 16 variants

0.1548

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.1544

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.1445

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.1346

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.1026

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.0812

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.0800

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.0728

Cluster X0306

log Bayes Factor = 24.0492

contains 2 variants

0.0608

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.0583

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.0580

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)