TreeWAS – [N18.4] Chronic kidney disease, stage 4

Variant effects

Click on a variant to see its association results.

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Genome-wide Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22

Results table

Variant	Risk posterior probability	No effect posterior probability	Protective posterior probability
rs5744807 lBF = `13.1175` Chr`12` : `133,243,621`	0.947	0.053	0.000
rs73141422 lBF = `22.399` Chr`12` : `83,882,469`	0.888	0.112	0.000
rs77821460 lBF = `20.1742` Chr`12` : `20,274,936`	0.823	0.177	0.000
rs11611673 lBF = `13.5862` Chr`12` : `121,451,150`	0.789	0.211	0.000
rs12425131 lBF = `16.2355` Chr`12` : `82,984,879`	0.751	0.249	0.000
rs117139804 lBF = `18.4888` Chr`12` : `116,233,671`	0.740	0.259	0.000
rs73040424 lBF = `7.46879` Chr`12` : `5,665,454`	0.735	0.265	0.000
rs73164250 lBF = `17.0593` Chr`12` : `84,624,334`	0.729	0.271	0.000
rs187353341 lBF = `19.0434` Chr`12` : `121,557,376`	0.726	0.274	0.000
rs11115322 lBF = `13.8059` Chr`12` : `83,019,188`	0.721	0.279	0.000
rs114453043 lBF = `22.0948` Chr`12` : `25,461,756`	0.720	0.280	0.000
rs76409154 lBF = `20.1612` Chr`12` : `85,692,134`	0.687	0.313	0.000
rs76242156 lBF = `19.5711` Chr`12` : `65,043,774`	0.686	0.314	0.000
rs7294372 lBF = `0.932637` Chr`12` : `114,637,423`	0.674	0.326	0.000
rs117929870 lBF = `16.9839` Chr`12` : `108,524,849`	0.671	0.329	0.000
rs117091826 lBF = `24.5799` Chr`12` : `112,629,713`	0.665	0.334	0.000
rs117409850 lBF = `13.4266` Chr`12` : `106,057,582`	0.665	0.335	0.000
rs34574480 lBF = `13.3586` Chr`12` : `115,307,567`	0.657	0.343	0.000
rs7307889 lBF = `7.08994` Chr`12` : `5,981,353`	0.653	0.347	0.000
rs78321382 lBF = `14.0322` Chr`12` : `17,070,922`	0.645	0.355	0.000
rs117629949 lBF = `14.77` Chr`12` : `25,021,224`	0.641	0.359	0.000
rs78221103 lBF = `16.6479` Chr`12` : `104,562,673`	0.629	0.371	0.000
rs1653608 lBF = `16.5227` Chr`12` : `121,706,733`	0.623	0.376	0.000
rs17102257 lBF = `14.6206` Chr`12` : `54,126,061`	0.592	0.407	0.000
rs76775795 lBF = `13.6666` Chr`12` : `115,385,431`	0.591	0.409	0.000
rs73045775 lBF = `23.3857` Chr`12` : `8,674,905`	0.576	0.424	0.000
rs79476482 lBF = `14.9329` Chr`12` : `76,084,550`	0.575	0.425	0.000
rs117492744 lBF = `13.2788` Chr`12` : `29,747,631`	0.557	0.443	0.000
rs79944777 lBF = `10.9261` Chr`12` : `73,011,538`	0.555	0.445	0.000
rs117605016 lBF = `28.0976` Chr`12` : `129,614,385`	0.541	0.458	0.000
rs78008978 lBF = `13.3787` Chr`12` : `77,282,680`	0.527	0.473	0.000
rs61943445 lBF = `13.7019` Chr`12` : `118,861,521`	0.519	0.481	0.000
rs80132640 lBF = `11.0963` Chr`12` : `49,426,460`	0.519	0.481	0.000
rs10506821 lBF = `13.2804` Chr`12` : `80,496,923`	0.488	0.512	0.000
rs79015790 lBF = `14.8688` Chr`12` : `128,700,249`	0.474	0.525	0.000
rs75489010 lBF = `27.7624` Chr`12` : `115,986,702`	0.473	0.527	0.000
rs73217910 lBF = `14.853` Chr`12` : `118,450,865`	0.464	0.536	0.000
rs59753639 lBF = `4.25806` Chr`12` : `25,140,690`	0.456	0.543	0.000
rs117557466 lBF = `12.1727` Chr`12` : `69,802,569`	0.450	0.550	0.000
rs11608709 lBF = `15.4681` Chr`12` : `99,302,859`	0.414	0.586	0.000
rs188610 lBF = `2.31323` Chr`12` : `313,839`	0.406	0.594	0.000
rs17443266 lBF = `15.2354` Chr`12` : `19,169,453`	0.385	0.615	0.000
rs4238083 lBF = `14.8083` Chr`12` : `42,924,769`	0.382	0.618	0.000
rs3809128 lBF = `2.10909` Chr`12` : `56,709,919`	0.380	0.619	0.000
rs6580622 lBF = `15.5075` Chr`12` : `47,936,778`	0.379	0.620	0.000
rs7307123 lBF = `21.9581` Chr`12` : `54,524,397`	0.376	0.624	0.000
rs117863495 lBF = `14.7593` Chr`12` : `129,432,374`	0.365	0.635	0.000
rs12582659 lBF = `4.82974` Chr`12` : `76,064,528`	0.362	0.638	0.000
rs117624816 lBF = `14.1981` Chr`12` : `18,210,143`	0.348	0.652	0.000
rs182057829 lBF = `2.49683` Chr`12` : `97,412,327`	0.344	0.656	0.000
rs2279695 lBF = `6.13321` Chr`12` : `117,154,262`	0.341	0.658	0.000
rs12423247 lBF = `0.921356` Chr`12` : `96,858,362`	0.339	0.661	0.000
rs12582852 lBF = `14.3759` Chr`12` : `3,315,933`	0.325	0.674	0.000
rs1291621 lBF = `15.6995` Chr`12` : `46,340,821`	0.313	0.686	0.000
rs73313995 lBF = `22.0276` Chr`12` : `33,622,807`	0.312	0.687	0.000
rs61756485 lBF = `16.787` Chr`12` : `99,020,125`	0.307	0.693	0.000
rs116877397 lBF = `30.7668` Chr`12` : `121,162,996`	0.304	0.696	0.000
rs117029533 lBF = `21.9889` Chr`12` : `66,632,067`	0.290	0.710	0.000
rs78437391 lBF = `22.4064` Chr`12` : `129,229,615`	0.288	0.712	0.000
rs16914920 lBF = `12.1807` Chr`12` : `19,128,595`	0.286	0.714	0.000
rs118079879 lBF = `5.09035` Chr`12` : `41,713,306`	0.283	0.717	0.000
rs75311705 lBF = `0.456159` Chr`12` : `125,714,596`	0.281	0.719	0.000
rs117437287 lBF = `16.5299` Chr`12` : `23,389,839`	0.279	0.721	0.000
rs12422544 lBF = `1.68441` Chr`12` : `40,528,432`	0.275	0.724	0.000
rs11175593 lBF = `2.45774` Chr`12` : `40,601,940`	0.273	0.727	0.000
rs74911677 lBF = `20.5271` Chr`12` : `122,015,993`	0.269	0.731	0.000
rs181609621 lBF = `1.56948` Chr`12` : `32,810,759`	0.264	0.736	0.000
rs2417373 lBF = `14.5305` Chr`12` : `14,744,468`	0.264	0.736	0.000
rs17040357 lBF = `13.7026` Chr`12` : `108,665,316`	0.252	0.748	0.000
rs144700679 lBF = `7.09223` Chr`12` : `115,468,959`	0.246	0.754	0.000
rs215398 lBF = `19.4313` Chr`12` : `47,767,134`	0.238	0.762	0.000
rs11609031 lBF = `16.3836` Chr`12` : `99,307,725`	0.234	0.765	0.000
rs11065791 lBF = `12.9532` Chr`12` : `111,460,000`	0.231	0.769	0.000
rs17813263 lBF = `23.117` Chr`12` : `69,481,381`	0.228	0.772	0.000
rs79918060 lBF = `17.5524` Chr`12` : `58,407,669`	0.222	0.778	0.000
rs79680354 lBF = `22.0763` Chr`12` : `119,361,070`	0.222	0.778	0.000
rs117636037 lBF = `18.8537` Chr`12` : `38,519,375`	0.218	0.782	0.000
rs143136847 lBF = `1.54314` Chr`12` : `82,748,339`	0.216	0.784	0.000
rs11066313 lBF = `14.8578` Chr`12` : `112,893,414`	0.214	0.786	0.000
rs199710891 lBF = `5.87106` Chr`12` : `14,273,071`	0.206	0.794	0.000
rs74910874 lBF = `2.61067` Chr`12` : `67,086,810`	0.202	0.797	0.000
rs75876943 lBF = `15.0045` Chr`12` : `86,555,845`	0.202	0.798	0.000
rs9332958 lBF = `5.25634` Chr`12` : `16,519,263`	0.198	0.802	0.000
rs12371484 lBF = `19.7008` Chr`12` : `111,872,722`	0.190	0.810	0.000
rs12310380 lBF = `8.99711` Chr`12` : `104,478,790`	0.187	0.813	0.000
rs80160299 lBF = `15.0308` Chr`12` : `66,159,224`	0.186	0.813	0.000
rs5742692 lBF = `2.17819` Chr`12` : `102,799,598`	0.186	0.814	0.000
rs77662038 lBF = `13.6756` Chr`12` : `83,497,229`	0.172	0.828	0.000
rs118113273 lBF = `22.5923` Chr`12` : `128,300,100`	0.172	0.828	0.000
rs1388585 lBF = `0.675794` Chr`12` : `40,531,691`	0.000	0.829	0.171
rs141480969 lBF = `0.733874` Chr`12` : `62,496,278`	0.158	0.842	0.000
rs117761474 lBF = `15.8826` Chr`12` : `113,029,356`	0.158	0.842	0.000
rs78851502 lBF = `8.34221` Chr`12` : `40,811,944`	0.151	0.849	0.000
rs2160519 lBF = `9.54207` Chr`12` : `13,787,846`	0.149	0.851	0.000
rs117759274 lBF = `14.7453` Chr`12` : `23,131,855`	0.143	0.857	0.000
rs76595471 lBF = `13.0273` Chr`12` : `80,228,443`	0.142	0.858	0.000
rs2722223 lBF = `24.9818` Chr`12` : `90,233,876`	0.141	0.859	0.000
rs11837432 lBF = `16.9657` Chr`12` : `2,170,893`	0.133	0.867	0.000
rs187986843 lBF = `15.061` Chr`12` : `69,080,770`	0.132	0.867	0.000
rs117303215 lBF = `9.21583` Chr`12` : `129,627,812`	0.113	0.887	0.000
rs35587409 lBF = `12.2827` Chr`12` : `100,841,306`	0.112	0.888	0.000
rs3217863 lBF = `9.55969` Chr`12` : `4,399,496`	0.111	0.889	0.000
rs11044722 lBF = `15.4222` Chr`12` : `19,781,710`	0.109	0.891	0.000
rs7309269 lBF = `13.6679` Chr`12` : `7,757,834`	0.103	0.897	0.000
rs74565952 lBF = `16.1651` Chr`12` : `71,112,797`	0.095	0.905	0.000
rs73201485 lBF = `11.279` Chr`12` : `114,791,319`	0.092	0.907	0.000
rs2608700 lBF = `16.0704` Chr`12` : `41,884,414`	0.091	0.909	0.000
rs116938548 lBF = `0.178688` Chr`12` : `4,808,251`	0.086	0.914	0.000
rs76001134 lBF = `19.3411` Chr`12` : `23,209,903`	0.085	0.915	0.000
rs191780267 lBF = `4.50227` Chr`12` : `89,289,255`	0.083	0.916	0.000
rs12423747 lBF = `15.1947` Chr`12` : `71,084,299`	0.082	0.918	0.000
rs144288546 lBF = `0.146461` Chr`12` : `129,069,682`	0.081	0.919	0.000
rs75289085 lBF = `19.4964` Chr`12` : `18,147,653`	0.080	0.919	0.000
rs149104283 lBF = `2.00778` Chr`12` : `21,083,862`	0.079	0.921	0.000
rs1528287 lBF = `13.6349` Chr`12` : `80,985,872`	0.078	0.922	0.000
rs80002652 lBF = `18.6612` Chr`12` : `107,437,422`	0.076	0.924	0.000
rs76859191 lBF = `0.57087` Chr`12` : `114,545,274`	0.074	0.925	0.000
rs2292303 lBF = `0.924716` Chr`12` : `102,513,531`	0.071	0.928	0.000
rs1235153 lBF = `9.04692` Chr`12` : `48,110,325`	0.069	0.931	0.000
rs35729753 lBF = `17.3029` Chr`12` : `66,672,379`	0.069	0.931	0.000
rs12370770 lBF = `24.384` Chr`12` : `112,277,084`	0.067	0.933	0.000
rs76796201 lBF = `14.1948` Chr`12` : `23,091,755`	0.066	0.933	0.000
rs79235855 lBF = `16.45` Chr`12` : `1,537,749`	0.066	0.934	0.000
Affx-8411664 lBF = `18.4862` Chr`12` : `71,094,955`	0.061	0.939	0.000
rs61919599 lBF = `9.83827` Chr`12` : `528,351`	0.060	0.940	0.000
rs4149639 lBF = `0.234732` Chr`12` : `6,442,001`	0.050	0.948	0.003
rs12230170 lBF = `6.64286` Chr`12` : `129,247,383`	0.050	0.950	0.000
rs112742247 lBF = `13.3959` Chr`12` : `85,030,619`	0.045	0.954	0.001
rs3794288 lBF = `0.216509` Chr`12` : `2,789,221`	0.045	0.955	0.000
rs78294386 lBF = `14.58` Chr`12` : `107,963,652`	0.041	0.959	0.000
rs41279092 lBF = `7.635` Chr`12` : `112,924,706`	0.000	0.959	0.041
rs12814941 lBF = `12.4883` Chr`12` : `106,408,172`	0.037	0.963	0.000
rs16906714 lBF = `0.0571485` Chr`12` : `30,860,557`	0.035	0.964	0.000
rs12322695 lBF = `0.0399753` Chr`12` : `117,199,414`	0.032	0.967	0.000
rs117458579 lBF = `15.4218` Chr`12` : `15,351,989`	0.029	0.971	0.000
rs61921073 lBF = `6.44028` Chr`12` : `30,660,861`	0.028	0.972	0.000
rs11065611 lBF = `0.0973389` Chr`12` : `110,704,487`	0.026	0.974	0.000
rs111825271 lBF = `10.5466` Chr`12` : `66,344,706`	0.024	0.975	0.000
rs12282 lBF = `0.00394501` Chr`12` : `133,345,809`	0.024	0.976	0.000
rs116910038 lBF = `0.0694182` Chr`12` : `85,424,093`	0.022	0.978	0.000
rs183825572 lBF = `0.0255777` Chr`12` : `101,264,845`	0.018	0.982	0.000
rs12304534 lBF = `8.83589` Chr`12` : `89,683,643`	0.018	0.982	0.000
rs11564258 lBF = `0.0464349` Chr`12` : `40,792,300`	0.017	0.983	0.000
rs10773087 lBF = `5.56414` Chr`12` : `124,878,404`	0.017	0.983	0.000
rs11065979 lBF = `94.2904` Chr`12` : `112,059,557`	0.017	0.983	0.000
rs13328933 lBF = `0.0463028` Chr`12` : `41,353,749`	0.000	0.984	0.016
rs188255132 lBF = `0.0230843` Chr`12` : `81,723,188`	0.015	0.985	0.000
rs117825839 lBF = `16.5381` Chr`12` : `28,978,196`	0.015	0.985	0.000
rs61944384 lBF = `10.148` Chr`12` : `111,952,215`	0.000	0.986	0.014
rs76450399 lBF = `14.1937` Chr`12` : `9,143,781`	0.013	0.987	0.000
rs11168249 lBF = `-0.0953362` Chr`12` : `48,208,368`	0.000	0.987	0.013
rs3782889 lBF = `-0.0106893` Chr`12` : `111,350,655`	0.010	0.990	0.000
rs75626916 lBF = `11.7941` Chr`12` : `108,663,870`	0.010	0.990	0.000
rs144148493 lBF = `0.015726` Chr`12` : `87,360,221`	0.010	0.990	0.000
rs12308914 lBF = `12.8877` Chr`12` : `104,633,842`	0.010	0.990	0.000
rs4594074 lBF = `0.0140546` Chr`12` : `41,032,092`	0.009	0.990	0.000
rs187293782 lBF = `0.0145963` Chr`12` : `76,157,356`	0.009	0.990	0.000
rs78574971 lBF = `12.9395` Chr`12` : `52,023,925`	0.009	0.991	0.000
rs71455379 lBF = `-0.0353711` Chr`12` : `11,558,877`	0.009	0.991	0.000
rs77628219 lBF = `0.0129624` Chr`12` : `87,404,130`	0.008	0.992	0.000
rs75593565 lBF = `13.6234` Chr`12` : `32,115,266`	0.008	0.992	0.000
rs187039407 lBF = `0.0120709` Chr`12` : `87,341,774`	0.008	0.992	0.000
rs17466626 lBF = `0.0332799` Chr`12` : `40,760,631`	0.008	0.992	0.000
rs78730305 lBF = `9.92833` Chr`12` : `104,669,564`	0.008	0.992	0.000
rs117439611 lBF = `14.8831` Chr`12` : `520,944`	0.008	0.992	0.000
rs6581612 lBF = `0.0439212` Chr`12` : `65,534,624`	0.008	0.992	0.000
rs79002142 lBF = `11.7979` Chr`12` : `85,143,591`	0.003	0.992	0.005
rs7298767 lBF = `17.6072` Chr`12` : `22,475,701`	0.007	0.993	0.000
rs2731006 lBF = `-0.0616696` Chr`12` : `43,160,825`	0.007	0.993	0.000
rs74452899 lBF = `12.3113` Chr`12` : `89,024,239`	0.007	0.993	0.000
rs11168187 lBF = `-0.0470456` Chr`12` : `48,044,011`	0.006	0.994	0.000
rs12815303 lBF = `-0.113448` Chr`12` : `62,387,183`	0.000	0.994	0.006
rs11174267 lBF = `-0.113046` Chr`12` : `62,386,600`	0.000	0.994	0.006
rs77649004 lBF = `14.247` Chr`12` : `96,135,916`	0.006	0.994	0.000
rs12817007 lBF = `-0.114843` Chr`12` : `62,387,282`	0.000	0.994	0.006
rs35444 lBF = `13.1451` Chr`12` : `115,552,437`	0.000	0.994	0.006
rs11108227 lBF = `16.4201` Chr`12` : `96,134,001`	0.005	0.994	0.000
rs142494129 lBF = `0.0386533` Chr`12` : `95,161,353`	0.005	0.994	0.000
rs73114523 lBF = `14.6366` Chr`12` : `54,602,032`	0.006	0.994	0.000
rs12817011 lBF = `-0.115072` Chr`12` : `62,387,287`	0.000	0.994	0.006
rs4760636 lBF = `-0.0548218` Chr`12` : `48,173,352`	0.000	0.994	0.006
rs117154046 lBF = `0.0198739` Chr`12` : `29,542,777`	0.005	0.995	0.000
rs7299341 lBF = `5.99167` Chr`12` : `83,224,324`	0.005	0.995	0.000
rs12321507 lBF = `16.2879` Chr`12` : `96,134,818`	0.004	0.995	0.000
rs187035304 lBF = `0.00715419` Chr`12` : `87,229,742`	0.004	0.996	0.000
rs117089640 lBF = `23.0292` Chr`12` : `125,048,557`	0.004	0.996	0.000
rs17126180 lBF = `0.00493889` Chr`12` : `52,263,956`	0.000	0.996	0.004
rs115720202 lBF = `18.7627` Chr`12` : `89,746,581`	0.004	0.996	0.001
rs887304 lBF = `0.00426339` Chr`12` : `3,757,548`	0.000	0.996	0.004
rs16926789 lBF = `-0.0139818` Chr`12` : `24,006,406`	0.004	0.996	0.000
rs146238395 lBF = `0.00960375` Chr`12` : `118,443,870`	0.004	0.996	0.000
rs2733283 lBF = `17.1055` Chr`12` : `41,935,977`	0.004	0.996	0.000
rs189010983 lBF = `0.0387565` Chr`12` : `84,086,176`	0.004	0.996	0.000
rs183032784 lBF = `0.00474184` Chr`12` : `118,257,214`	0.003	0.996	0.000
rs11174650 lBF = `-0.0389025` Chr`12` : `63,179,929`	0.004	0.996	0.000
rs55922880 lBF = `0.00435799` Chr`12` : `115,617,641`	0.003	0.996	0.000
rs56269309 lBF = `12.8645` Chr`12` : `127,453,025`	0.003	0.997	0.000
rs183244340 lBF = `0.0050197` Chr`12` : `87,005,576`	0.003	0.997	0.000
rs3782455 lBF = `0.0156366` Chr`12` : `114,359,265`	0.003	0.997	0.000
rs56360506 lBF = `10.2114` Chr`12` : `53,222,800`	0.003	0.997	0.000
rs11174454 lBF = `8.97302` Chr`12` : `62,781,002`	0.003	0.997	0.000
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rs4474514 lBF = `0.605549` Chr`12` : `88,953,959`	0.000	0.999	0.001
rs114588203 lBF = `-0.0114496` Chr`12` : `68,956,185`	0.001	0.999	0.000
rs10880855 lBF = `-0.0803642` Chr`12` : `46,144,855`	0.000	0.999	0.001
rs2261181 lBF = `5.79392` Chr`12` : `66,212,318`	0.001	0.999	0.000
rs2036225 lBF = `-0.0670661` Chr`12` : `99,190,372`	0.001	0.999	0.000
rs73211928 lBF = `9.06643` Chr`12` : `118,039,876`	0.000	0.999	0.000
rs2460882 lBF = `2.95136` Chr`12` : `53,787,953`	0.001	0.999	0.000
rs57514780 lBF = `1.0288` Chr`12` : `69,397,789`	0.000	0.999	0.000
rs12316703 lBF = `-0.0111268` Chr`12` : `118,840,457`	0.001	0.999	0.000
rs2965667 lBF = `-0.019105` Chr`12` : `17,444,733`	0.000	0.999	0.001
rs10849004 lBF = `-0.0224511` Chr`12` : `4,292,862`	0.000	0.999	0.001
rs10219673 lBF = `-0.0290688` Chr`12` : `17,639,951`	0.000	0.999	0.001
rs4964805 lBF = `-0.070251` Chr`12` : `104,192,824`	0.001	0.999	0.000
rs11065987 lBF = `90.6309` Chr`12` : `112,072,424`	0.001	0.999	0.000
rs11171846 lBF = `1.1123` Chr`12` : `56,828,056`	0.000	0.999	0.001
rs12817488 lBF = `0.741885` Chr`12` : `123,296,294`	0.001	0.999	0.000
rs7136716 lBF = `0.141371` Chr`12` : `7,691,134`	0.001	0.999	0.000
rs150516896 lBF = `-0.0114489` Chr`12` : `68,955,572`	0.001	0.999	0.000
rs11046207 lBF = `-0.0250733` Chr`12` : `21,996,045`	0.001	0.999	0.000
rs247929 lBF = `-0.0709715` Chr`12` : `46,294,908`	0.000	0.999	0.001
rs61941274 lBF = `0.00529695` Chr`12` : `112,132,610`	0.001	0.999	0.000
rs1882496 lBF = `-0.00032723` Chr`12` : `104,900,584`	0.000	0.999	0.000
rs17539289 lBF = `-0.0209531` Chr`12` : `41,126,330`	0.000	0.999	0.001
rs201412 lBF = `-0.033668` Chr`12` : `99,290,313`	0.001	0.999	0.000
rs61144803 lBF = `0.00541419` Chr`12` : `94,235,165`	0.000	0.999	0.001
rs11109072 lBF = `0.00527338` Chr`12` : `97,901,270`	0.000	0.999	0.001
rs17121944 lBF = `-0.0102276` Chr`12` : `59,440,232`	0.000	0.999	0.001
rs116075389 lBF = `-0.0115206` Chr`12` : `68,957,164`	0.000	0.999	0.000
rs4761097 lBF = `-0.0568683` Chr`12` : `85,187,511`	0.001	0.999	0.000
rs10506418 lBF = `0.0272495` Chr`12` : `61,488,772`	0.001	0.999	0.000
rs11063421 lBF = `0.0122143` Chr`12` : `5,058,393`	0.000	0.999	0.001
rs7955374 lBF = `0.00082072` Chr`12` : `47,880,149`	0.000	0.999	0.001
rs678069 lBF = `-0.0175837` Chr`12` : `53,102,196`	0.001	0.999	0.000
rs703842 lBF = `-0.0489243` Chr`12` : `58,162,739`	0.000	0.999	0.000
rs895470 lBF = `-0.072321` Chr`12` : `118,146,742`	0.000	0.999	0.001
rs517020 lBF = `-0.0823316` Chr`12` : `129,462,703`	0.000	0.999	0.001
rs11170116 lBF = `5.50057` Chr`12` : `52,806,798`	0.001	0.999	0.000
rs10431397 lBF = `0.624202` Chr`12` : `118,106,194`	0.000	0.999	0.000
rs3782181 lBF = `0.616058` Chr`12` : `88,953,561`	0.000	0.999	0.001
rs10466868 lBF = `0.108617` Chr`12` : `131,939,920`	0.000	0.999	0.001
rs4765623 lBF = `0.00216448` Chr`12` : `125,320,850`	0.000	0.999	0.001
rs12370001 lBF = `-0.00554657` Chr`12` : `73,044,622`	0.000	0.999	0.001
rs2120991 lBF = `-0.0505507` Chr`12` : `54,270,228`	0.000	0.999	0.001
rs73200436 lBF = `2.81861` Chr`12` : `110,062,693`	0.000	0.999	0.000
rs11062987 lBF = `0.437239` Chr`12` : `4,173,126`	0.000	0.999	0.001
rs11115148 lBF = `-0.0616645` Chr`12` : `82,389,124`	0.000	0.999	0.001
rs12367448 lBF = `0.0638072` Chr`12` : `69,581,222`	0.001	0.999	0.000
rs11051170 lBF = `0.0176364` Chr`12` : `31,085,399`	0.000	0.999	0.001
rs10843164 lBF = `-0.0703736` Chr`12` : `28,569,714`	0.001	0.999	0.000
rs248812 lBF = `-0.123272` Chr`12` : `98,061,146`	0.000	0.999	0.001
rs117291831 lBF = `7.6951` Chr`12` : `127,045,967`	0.000	0.999	0.000
rs1511589 lBF = `0.272335` Chr`12` : `84,061,431`	0.000	0.999	0.001
rs77206607 lBF = `0.0407578` Chr`12` : `126,554,363`	0.001	0.999	0.000
rs186586221 lBF = `0.00794423` Chr`12` : `75,574,323`	0.000	0.999	0.000
rs79946301 lBF = `-0.00185935` Chr`12` : `130,117,149`	0.000	0.999	0.000
rs11177669 lBF = `-0.00206854` Chr`12` : `69,828,681`	0.000	0.999	0.000
rs17095830 lBF = `-0.0101787` Chr`12` : `45,774,908`	0.000	0.999	0.001
rs17399946 lBF = `-0.0373469` Chr`12` : `24,077,509`	0.000	0.999	0.001
rs111341849 lBF = `13.9983` Chr`12` : `83,961,998`	0.000	0.999	0.000
rs12371778 lBF = `3.95458` Chr`12` : `28,156,081`	0.001	0.999	0.000
rs17040430 lBF = `0.425945` Chr`12` : `108,742,820`	0.000	0.999	0.000
rs17719439 lBF = `0.392579` Chr`12` : `116,211,863`	0.000	0.999	0.001
rs2172873 lBF = `0.108565` Chr`12` : `103,125,690`	0.001	0.999	0.000
rs2252518 lBF = `-0.0545461` Chr`12` : `52,381,026`	0.000	0.999	0.001
rs11049611 lBF = `-0.0625499` Chr`12` : `28,600,244`	0.001	0.999	0.000
rs3751196 lBF = `0.93961` Chr`12` : `104,157,502`	0.000	0.999	0.001
rs10859525 lBF = `0.200562` Chr`12` : `93,948,457`	0.001	0.999	0.000
rs12423712 lBF = `0.0543282` Chr`12` : `125,033,933`	0.001	0.999	0.000
rs1399439 lBF = `0.00947023` Chr`12` : `101,221,239`	0.001	0.999	0.000
rs1795708 lBF = `0.00830607` Chr`12` : `58,750,680`	0.000	0.999	0.001
rs9971637 lBF = `-0.00275548` Chr`12` : `17,373,739`	0.000	0.999	0.000
rs7299538 lBF = `-0.119961` Chr`12` : `46,085,330`	0.001	0.999	0.000
rs1442190 lBF = `0.0041724` Chr`12` : `41,365,640`	0.000	0.999	0.000
rs143888465 lBF = `0.00254406` Chr`12` : `52,010,108`	0.000	0.999	0.000
rs10876432 lBF = `-0.00163782` Chr`12` : `53,731,891`	0.000	0.999	0.001
rs11104877 lBF = `-0.0453462` Chr`12` : `88,837,244`	0.000	0.999	0.001
rs838886 lBF = `-0.0554773` Chr`12` : `125,264,287`	0.001	0.999	0.000
rs10506328 lBF = `-0.0563244` Chr`12` : `54,687,232`	0.000	0.999	0.001
rs12367822 lBF = `-0.0581335` Chr`12` : `57,204,160`	0.001	0.999	0.000
rs17824620 lBF = `0.0411077` Chr`12` : `113,100,994`	0.001	0.999	0.000
rs11064881 lBF = `0.0319045` Chr`12` : `120,146,925`	0.000	0.999	0.000
rs138850252 lBF = `0.0193022` Chr`12` : `126,567,246`	0.000	0.999	0.000
rs139680557 lBF = `0.0111233` Chr`12` : `108,061,589`	0.000	0.999	0.000
rs11058518 lBF = `0.0101956` Chr`12` : `126,582,613`	0.000	0.999	0.000
rs11175944 lBF = `0.00425637` Chr`12` : `66,256,395`	0.000	0.999	0.000
rs7964004 lBF = `-0.00274793` Chr`12` : `113,132,441`	0.001	0.999	0.000
rs7136572 lBF = `-0.00402774` Chr`12` : `95,959,788`	0.000	0.999	0.000
rs12309274 lBF = `-0.0621926` Chr`12` : `975,948`	0.000	0.999	0.000
rs11045000 lBF = `7.56762` Chr`12` : `20,184,146`	0.000	0.999	0.000
rs12310399 lBF = `3.09393` Chr`12` : `95,490,248`	0.000	0.999	0.000
rs80130819 lBF = `1.17567` Chr`12` : `48,419,618`	0.000	0.999	0.000
rs995030 lBF = `0.708423` Chr`12` : `88,890,671`	0.000	0.999	0.000
rs11180559 lBF = `0.335449` Chr`12` : `75,920,285`	0.000	0.999	0.000
rs66861122 lBF = `0.0602399` Chr`12` : `101,383,958`	0.000	0.999	0.000
rs3751237 lBF = `0.0264358` Chr`12` : `27,963,507`	0.000	0.999	0.000
rs4298948 lBF = `0.0247646` Chr`12` : `122,276,255`	0.000	0.999	0.000
rs148621641 lBF = `0.0227733` Chr`12` : `78,772,439`	0.000	0.999	0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0031

log Bayes Factor = 111.103

contains 3 variants

0.9609

Cluster X0333

log Bayes Factor = 38.671

contains 2 variants

0.6428

Cluster X0335

log Bayes Factor = 12.3689

contains 1 variants

0.5970

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0059

log Bayes Factor = 922.497

contains 26 variants

1.0000

Cluster X0332

log Bayes Factor = 65.2374

contains 3 variants

0.9985

Cluster X0073

log Bayes Factor = 785.614

contains 25 variants

0.9975

Cluster X0047

log Bayes Factor = 378.621

contains 14 variants

0.9971

Cluster X0152

log Bayes Factor = 331.156

contains 10 variants

0.9945

Cluster X0192

log Bayes Factor = 402.511

contains 14 variants

0.9935

Cluster X0029

log Bayes Factor = 709.102

contains 23 variants

0.9934

Cluster X0049

log Bayes Factor = 597.061

contains 18 variants

0.9918

Cluster X0057

log Bayes Factor = 439.35

contains 16 variants

0.9913

Cluster X0067

log Bayes Factor = 179.381

contains 8 variants

0.9912

Cluster X0020

log Bayes Factor = 557.721

contains 18 variants

0.9910

Cluster X0142

log Bayes Factor = 295.63

contains 12 variants

0.9890

Cluster X0111

log Bayes Factor = 403.183

contains 18 variants

0.9888

Cluster X0040

log Bayes Factor = 542.747

contains 16 variants

0.9844

Cluster X0150

log Bayes Factor = 861.091

contains 26 variants

0.9837

Cluster X0253

log Bayes Factor = 331.491

contains 13 variants

0.9810

Cluster X0098

log Bayes Factor = 246.226

contains 8 variants

0.9770

Cluster X0145

log Bayes Factor = 274.587

contains 11 variants

0.9758

Cluster X0277

log Bayes Factor = 726.213

contains 23 variants

0.9756

Cluster X0176

log Bayes Factor = 407.797

contains 14 variants

0.9743

Cluster X0039

log Bayes Factor = 463.231

contains 17 variants

0.9696

Cluster X0018

log Bayes Factor = 430.611

contains 18 variants

0.9673

Cluster X0264

log Bayes Factor = 205.833

contains 10 variants

0.9635

Cluster X0257

log Bayes Factor = 281.184

contains 10 variants

0.9582

Cluster X0212

log Bayes Factor = 300.777

contains 10 variants

0.9544

Cluster X0026

log Bayes Factor = 232.119

contains 9 variants

0.9518

Cluster X0213

log Bayes Factor = 405.918

contains 15 variants

0.9490

Cluster X0209

log Bayes Factor = 214.798

contains 8 variants

0.9474

Cluster X0124

log Bayes Factor = 336.468

contains 13 variants

0.9467

Cluster X0082

log Bayes Factor = 496.905

contains 17 variants

0.9460

Cluster X0177

log Bayes Factor = 254.872

contains 10 variants

0.9443

Cluster X0170

log Bayes Factor = 264.081

contains 11 variants

0.9420

Cluster X0030

log Bayes Factor = 216.364

contains 9 variants

0.9402

Cluster X0055

log Bayes Factor = 274.911

contains 10 variants

0.9353

Cluster X0153

log Bayes Factor = 328.394

contains 11 variants

0.9309

Cluster X0161

log Bayes Factor = 609.219

contains 20 variants

0.9245

Cluster X0189

log Bayes Factor = 149.681

contains 5 variants

0.9191

Cluster X0191

log Bayes Factor = 163.555

contains 8 variants

0.9191

Cluster X0164

log Bayes Factor = 463.793

contains 16 variants

0.9138

Cluster X0244

log Bayes Factor = 122.647

contains 5 variants

0.9103

Cluster X0072

log Bayes Factor = 1189.98

contains 37 variants

0.9099

Cluster X0126

log Bayes Factor = 384.432

contains 15 variants

0.9084

Cluster X0109

log Bayes Factor = 257.685

contains 11 variants

0.9077

Cluster X0054

log Bayes Factor = 197.338

contains 9 variants

0.9044

Cluster X0100

log Bayes Factor = 730.252

contains 26 variants

0.9004

Cluster X0174

log Bayes Factor = 214.209

contains 8 variants

0.8936

Cluster X0225

log Bayes Factor = 36.4143

contains 3 variants

0.8871

Cluster X0320

log Bayes Factor = 110.964

contains 6 variants

0.8810

Cluster X0110

log Bayes Factor = 721.325

contains 13 variants

0.8766

Cluster X0182

log Bayes Factor = 91.4459

contains 4 variants

0.8741

Cluster X0194

log Bayes Factor = 189.9

contains 5 variants

0.8735

Cluster X0070

log Bayes Factor = 421.182

contains 15 variants

0.8599

Cluster X0229

log Bayes Factor = 347.165

contains 13 variants

0.8596

Cluster X0259

log Bayes Factor = 246.237

contains 11 variants

0.8549

Cluster X0258

log Bayes Factor = 104.851

contains 6 variants

0.8509

Cluster X0003

log Bayes Factor = 195.6

contains 8 variants

0.8473

Cluster X0088

log Bayes Factor = 243.609

contains 9 variants

0.8420

Cluster X0037

log Bayes Factor = 171.712

contains 6 variants

0.8369

Cluster X0122

log Bayes Factor = 219.114

contains 9 variants

0.8345

Cluster X0205

log Bayes Factor = 674.183

contains 18 variants

0.8345

Cluster X0293

log Bayes Factor = 169.051

contains 7 variants

0.8298

Cluster X0007

log Bayes Factor = 107.567

contains 7 variants

0.8040

Cluster X0094

log Bayes Factor = 562.956

contains 18 variants

0.7989

Cluster X0021

log Bayes Factor = 338.631

contains 13 variants

0.7774

Cluster X0068

log Bayes Factor = 127.774

contains 6 variants

0.7716

Cluster X0024

log Bayes Factor = 309.44

contains 13 variants

0.7577

Cluster X0231

log Bayes Factor = 82.3185

contains 5 variants

0.7083

Cluster X0129

log Bayes Factor = 195.809

contains 7 variants

0.7073

Cluster X0077

log Bayes Factor = 571.533

contains 17 variants

0.6971

Cluster X0201

log Bayes Factor = 368.049

contains 13 variants

0.6725

Cluster X0028

log Bayes Factor = 120.445

contains 7 variants

0.6716

Cluster X0268

log Bayes Factor = 213.591

contains 8 variants

0.6605

Cluster X0139

log Bayes Factor = 304.555

contains 10 variants

0.6559

Cluster X0178

log Bayes Factor = 225.6

contains 9 variants

0.6008

Cluster X0248

log Bayes Factor = 254.854

contains 10 variants

0.5952

Cluster X0146

log Bayes Factor = 686.343

contains 22 variants

0.5887

Cluster X0141

log Bayes Factor = 742.063

contains 30 variants

0.5828

Cluster X0185

log Bayes Factor = 84.7127

contains 6 variants

0.5799

Cluster X0224

log Bayes Factor = 278.692

contains 11 variants

0.5713

Cluster X0014

log Bayes Factor = 131.677

contains 6 variants

0.5492

Cluster X0159

log Bayes Factor = 152.327

contains 7 variants

0.5157

Cluster X0075

log Bayes Factor = 431.344

contains 16 variants

0.5127

Cluster X0045

log Bayes Factor = 446.264

contains 16 variants

0.5110

Cluster X0081

log Bayes Factor = 278.568

contains 10 variants

0.5004

Cluster X0184

log Bayes Factor = 188.416

contains 8 variants

0.4935

Cluster X0051

log Bayes Factor = 376.793

contains 14 variants

0.4445

Cluster X0012

log Bayes Factor = 112.432

contains 5 variants

0.4254

Cluster X0166

log Bayes Factor = 230.746

contains 8 variants

0.4249

Cluster X0084

log Bayes Factor = 433.078

contains 21 variants

0.4129

Cluster X0032

log Bayes Factor = 255.737

contains 12 variants

0.4002

Cluster X0156

log Bayes Factor = 226.954

contains 9 variants

0.3841

Cluster X0246

log Bayes Factor = 121.08

contains 5 variants

0.3835

Cluster X0004

log Bayes Factor = 32.8452

contains 2 variants

0.3785

Cluster X0121

log Bayes Factor = 131.08

contains 9 variants

0.3674

Cluster X0237

log Bayes Factor = 123.902

contains 6 variants

0.3264

Cluster X0095

log Bayes Factor = 179.348

contains 8 variants

0.3140

Cluster X0290

log Bayes Factor = 333.908

contains 13 variants

0.3123

Cluster X0155

log Bayes Factor = 348.568

contains 12 variants

0.3094

Cluster X0222

log Bayes Factor = 431.582

contains 17 variants

0.3075

Cluster X0165

log Bayes Factor = 303.727

contains 12 variants

0.2991

Cluster X0274

log Bayes Factor = 454.783

contains 18 variants

0.2627

Cluster X0102

log Bayes Factor = 99.5678

contains 5 variants

0.2598

Cluster X0074

log Bayes Factor = 353.38

contains 15 variants

0.2312

Cluster X0203

log Bayes Factor = 363.522

contains 11 variants

0.2300

Cluster X0058

log Bayes Factor = 183.199

contains 8 variants

0.2166

Cluster X0249

log Bayes Factor = 244.457

contains 11 variants

0.2033

Cluster X0267

log Bayes Factor = 92.4806

contains 5 variants

0.2001

Cluster X0050

log Bayes Factor = 397.79

contains 16 variants

0.1933

Cluster X0106

log Bayes Factor = 980.916

contains 30 variants

0.1924

Cluster X0157

log Bayes Factor = 172.957

contains 8 variants

0.1662

Cluster X0278

log Bayes Factor = 173.437

contains 11 variants

0.1464

Cluster X0044

log Bayes Factor = 1165.44

contains 34 variants

0.1398

Cluster X0171

log Bayes Factor = 291.293

contains 14 variants

0.1379

Cluster X0005

log Bayes Factor = 282.915

contains 11 variants

0.1341

Cluster X0214

log Bayes Factor = 186.582

contains 8 variants

0.1214

Cluster X0275

log Bayes Factor = 219.726

contains 10 variants

0.1159

Cluster X0276

log Bayes Factor = 187.108

contains 9 variants

0.1101

Cluster X0033

log Bayes Factor = 379.444

contains 13 variants

0.1008

Cluster X0232

log Bayes Factor = 695.273

contains 23 variants

0.1004

Cluster X0271

log Bayes Factor = 256.743

contains 10 variants

0.0960

Cluster X0079

log Bayes Factor = 413.803

contains 22 variants

0.0941

Cluster X0300

log Bayes Factor = 109.684

contains 3 variants

0.0817

Cluster X0143

log Bayes Factor = 179.808

contains 8 variants

0.0761

Cluster X0181

log Bayes Factor = 141.396

contains 6 variants

0.0730

Cluster X0132

log Bayes Factor = 267.393

contains 11 variants

0.0694

Cluster X0087

log Bayes Factor = 894.58

contains 26 variants

0.0632

Cluster X0063

log Bayes Factor = 107.557

contains 5 variants

0.0608

Cluster X0147

log Bayes Factor = 133.509

contains 9 variants

0.0562

Cluster X0069

log Bayes Factor = 519.392

contains 20 variants

0.0547

Cluster X0062

log Bayes Factor = 68.7461

contains 4 variants

0.0502

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

Diagnostic term associations

Hospitalization Episode Statistics (`HES`)

(posterior probability > 0.05)

(posterior probability > 0.05)

Diagnostic term associations

Hospitalization Episode Statistics (HES)

(posterior probability > 0.05)

(posterior probability > 0.05)

Hospitalization Episode Statistics (`HES`)