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Variant clusters
Hospitalization Episode Statistics (HES)
Genetic variants: 36,212
Diagnostic terms: × 19,155
Association results: = 693,640,860
Self-Reported Statistics (SRS)
Genetic variants: 28,458
Diagnostic terms: × 474
Association results: = 13,489,092
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Diagnostic term associations

Hospitalization Episode Statistics (HES)

L43
Lichen planus
Parent term
L40-L45 Papulosquamous disorders
Nested terms
L43.0 Hypertrophic lichen planus
L43.1 Bullous lichen planus
L43.2 Lichenoid drug reaction
L43.3 Subacute (active) lichen planus
L43.8 Other lichen planus
L43.9 Lichen planus, unspecified
What are diagnostic terms?
Variant effects

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Genome-wide   Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Results table
Variant Risk
posterior probability
 No effect
posterior probability
 Protective
posterior probability
  
rs113278181 lBF = 16.158   Chr3 : 181,528,099
0.860 0.140 0.000
rs9845885 lBF = 20.2448   Chr3 : 149,061,913
0.818 0.182 0.000
rs79423378 lBF = 19.4481   Chr3 : 101,810,579
0.759 0.241 0.000
rs11719004 lBF = 11.3543   Chr3 : 100,349
0.759 0.241 0.000
rs6785320 lBF = 10.9668   Chr3 : 130,202,456
0.746 0.254 0.000
rs62262721 lBF = 9.29228   Chr3 : 49,768,927
0.674 0.326 0.000
rs79019069 lBF = 4.63997   Chr3 : 148,481,023
0.674 0.326 0.000
rs75580679 lBF = 22.8822   Chr3 : 77,420,959
0.669 0.331 0.000
rs77817374 lBF = 19.5179   Chr3 : 185,841,654
0.668 0.332 0.000
rs116485796 lBF = 8.88422   Chr3 : 133,612,103
0.647 0.353 0.000
rs79394537 lBF = 24.4434   Chr3 : 77,399,960
0.626 0.374 0.000
rs113934085 lBF = 13.4975   Chr3 : 151,627,433
0.624 0.376 0.000
rs77583790 lBF = 5.04409   Chr3 : 159,694,053
0.624 0.376 0.000
rs116438991 lBF = 14.2398   Chr3 : 65,698,107
0.618 0.382 0.000
rs116367285 lBF = 12.3707   Chr3 : 65,094,139
0.615 0.385 0.000
rs112472535 lBF = 16.0956   Chr3 : 130,285,880
0.610 0.390 0.000
rs79224527 lBF = 25.2596   Chr3 : 193,132,284
0.608 0.392 0.000
rs17880984 lBF = 14.3287   Chr3 : 3,127,122
0.607 0.393 0.000
rs61129840 lBF = 17.9422   Chr3 : 16,363,529
0.604 0.396 0.000
rs73165246 lBF = 10.4101   Chr3 : 164,952,146
0.593 0.407 0.000
rs41291189 lBF = 5.43607   Chr3 : 69,074,878
0.590 0.410 0.000
rs35144609 lBF = 18.4605   Chr3 : 188,053,678
0.585 0.415 0.000
rs78613695 lBF = 14.371   Chr3 : 140,106,659
0.578 0.422 0.000
rs77425173 lBF = 10.1827   Chr3 : 16,991,193
0.566 0.434 0.000
rs80170259 lBF = 21.9182   Chr3 : 5,724,208
0.565 0.434 0.000
rs115684255 lBF = 12.9903   Chr3 : 84,304,714
0.564 0.436 0.000
rs9832761 lBF = 14.5966   Chr3 : 4,431,283
0.554 0.446 0.000
rs74378727 lBF = 16.4978   Chr3 : 88,374,390
0.553 0.446 0.000
rs78489084 lBF = 16.6721   Chr3 : 132,240,307
0.547 0.453 0.000
rs78687901 lBF = 17.8934   Chr3 : 173,074,141
0.543 0.457 0.000
rs181319480 lBF = 9.5655   Chr3 : 58,793,057
0.542 0.458 0.000
rs2526391 lBF = 5.75868   Chr3 : 50,169,266
0.541 0.458 0.000
rs114239030 lBF = 16.2356   Chr3 : 84,228,854
0.541 0.459 0.000
rs1050602 lBF = 18.9048   Chr3 : 115,439,578
0.540 0.460 0.000
rs114561626 lBF = 19.183   Chr3 : 44,188,954
0.530 0.470 0.000
rs73137637 lBF = 6.05154   Chr3 : 85,006,865
0.524 0.476 0.000
rs115310313 lBF = 22.9207   Chr3 : 51,811,751
0.510 0.490 0.000
rs73125111 lBF = 7.02008   Chr3 : 85,110,971
0.509 0.491 0.000
rs148838820 lBF = 16.8302   Chr3 : 157,221,258
0.506 0.494 0.000
rs79858132 lBF = 12.9845   Chr3 : 181,589,717
0.502 0.498 0.000
rs114946066 lBF = 5.04818   Chr3 : 185,653,097
0.501 0.499 0.000
rs116155186 lBF = 6.15229   Chr3 : 85,368,819
0.498 0.501 0.000
rs4685943 lBF = 1.3179   Chr3 : 5,535,277
0.498 0.501 0.000
rs148691683 lBF = 20.3785   Chr3 : 81,821,483
0.497 0.503 0.000
rs73130739 lBF = 7.84824   Chr3 : 85,287,296
0.497 0.503 0.000
rs188135659 lBF = 15.5868   Chr3 : 19,839,062
0.495 0.505 0.000
rs79034905 lBF = 16.0754   Chr3 : 189,981,934
0.494 0.506 0.000
rs73176713 lBF = 14.4642   Chr3 : 174,685,918
0.493 0.507 0.000
rs114361094 lBF = 23.0255   Chr3 : 32,794,806
0.489 0.511 0.000
rs9835928 lBF = 17.3241   Chr3 : 114,296,725
0.485 0.515 0.000
rs115754869 lBF = 17.8128   Chr3 : 152,084,816
0.484 0.516 0.000
rs115044935 lBF = 24.1643   Chr3 : 175,446,721
0.483 0.517 0.000
rs61791114 lBF = 15.9998   Chr3 : 170,748,859
0.481 0.519 0.000
rs71323034 lBF = 16.6347   Chr3 : 31,072,353
0.481 0.519 0.000
rs148743497 lBF = 31.1946   Chr3 : 43,743,914
0.480 0.519 0.000
rs149049329 lBF = 6.27065   Chr3 : 187,597,927
0.480 0.519 0.000
rs112312290 lBF = 16.2925   Chr3 : 52,094,201
0.480 0.520 0.000
rs17791975 lBF = 7.13706   Chr3 : 85,118,035
0.479 0.521 0.000
rs114807680 lBF = 13.419   Chr3 : 134,804,491
0.478 0.522 0.000
rs147922770 lBF = 13.4146   Chr3 : 185,588,941
0.476 0.524 0.000
rs116660070 lBF = 17.3726   Chr3 : 19,939,758
0.473 0.527 0.000
rs190548655 lBF = 14.709   Chr3 : 45,388,151
0.470 0.530 0.000
rs116094500 lBF = 19.4328   Chr3 : 136,004,961
0.469 0.531 0.000
rs115020061 lBF = 13.9152   Chr3 : 13,548,716
0.468 0.531 0.000
rs79470404 lBF = 28.8963   Chr3 : 136,509,875
0.464 0.536 0.000
rs115023769 lBF = 14.1062   Chr3 : 153,241,084
0.463 0.536 0.000
rs79843152 lBF = 32.6845   Chr3 : 185,749,963
0.459 0.541 0.000
Affx-21291542 lBF = 12.1623   Chr3 : 141,344,672
0.459 0.541 0.000
rs77685854 lBF = 10.8777   Chr3 : 32,897,040
0.455 0.545 0.000
rs919096 lBF = 16.1252   Chr3 : 41,209,869
0.455 0.545 0.000
rs75548506 lBF = 21.2834   Chr3 : 35,532,707
0.454 0.546 0.000
rs1948390 lBF = 10.3593   Chr3 : 161,624,890
0.451 0.548 0.000
rs73134752 lBF = 11.2492   Chr3 : 85,437,738
0.451 0.549 0.000
rs74736071 lBF = 21.8989   Chr3 : 136,604,687
0.443 0.557 0.000
rs3828380 lBF = 11.1618   Chr3 : 145,923,751
0.443 0.557 0.000
rs116927146 lBF = 15.0921   Chr3 : 152,264,287
0.442 0.558 0.000
rs111797345 lBF = 22.7323   Chr3 : 69,168,628
0.442 0.558 0.000
rs73052920 lBF = 29.3216   Chr3 : 37,760,669
0.441 0.559 0.000
rs138869894 lBF = 0.628894   Chr3 : 158,844,941
0.440 0.559 0.000
rs73116718 lBF = 18.3781   Chr3 : 78,952,189
0.434 0.565 0.000
rs114101798 lBF = 17.9738   Chr3 : 135,286,950
0.434 0.566 0.000
rs73138705 lBF = 14.0343   Chr3 : 85,470,361
0.433 0.566 0.000
rs17036170 lBF = 4.42318   Chr3 : 12,330,411
0.433 0.566 0.000
rs79143957 lBF = 12.6617   Chr3 : 23,125,989
0.428 0.572 0.000
rs112854017 lBF = 12.0702   Chr3 : 151,621,829
0.422 0.577 0.000
rs114097330 lBF = 13.9687   Chr3 : 34,717,222
0.403 0.596 0.000
rs150021639 lBF = 15.8327   Chr3 : 49,689,642
0.403 0.596 0.000
rs111863112 lBF = 18.891   Chr3 : 46,449,863
0.401 0.599 0.000
rs73045695 lBF = 7.26665   Chr3 : 177,547,836
0.399 0.601 0.000
rs79677038 lBF = 13.4106   Chr3 : 177,664,059
0.398 0.601 0.000
rs73023170 lBF = 12.1533   Chr3 : 11,630,099
0.398 0.602 0.000
rs17023661 lBF = 2.09285   Chr3 : 86,968,509
0.398 0.602 0.000
rs116740811 lBF = 5.20808   Chr3 : 76,718,625
0.397 0.603 0.000
rs77330364 lBF = 16.5387   Chr3 : 79,373,033
0.397 0.603 0.000
rs35727241 lBF = 15.5892   Chr3 : 191,366,444
0.397 0.603 0.000
rs77923412 lBF = 11.2716   Chr3 : 101,886,745
0.394 0.605 0.000
rs118068306 lBF = 14.8013   Chr3 : 14,273,131
0.394 0.606 0.000
rs76503726 lBF = 17.5831   Chr3 : 36,613,237
0.392 0.608 0.000
rs112475278 lBF = 12.7647   Chr3 : 103,347,707
0.391 0.609 0.000
rs114850483 lBF = 16.0626   Chr3 : 5,754,763
0.386 0.614 0.000
rs28582745 lBF = 2.00824   Chr3 : 169,459,325
0.382 0.617 0.000
rs79349737 lBF = 15.1686   Chr3 : 190,888,250
0.382 0.618 0.000
rs56319538 lBF = 14.9989   Chr3 : 78,406,226
0.381 0.619 0.000
rs115573344 lBF = 14.0832   Chr3 : 27,887,025
0.381 0.619 0.000
rs78417298 lBF = 19.5275   Chr3 : 52,723,309
0.379 0.621 0.000
rs114771627 lBF = 15.3109   Chr3 : 107,564,852
0.379 0.621 0.000
rs61740470 lBF = 25.1179   Chr3 : 46,491,985
0.378 0.622 0.000
rs80031977 lBF = 14.0549   Chr3 : 49,599,902
0.375 0.625 0.000
rs112458845 lBF = 1.1883   Chr3 : 138,675,741
0.374 0.625 0.000
Affx-21645068 lBF = 13.8948   Chr3 : 17,152,151
0.372 0.628 0.000
rs17033506 lBF = 6.61563   Chr3 : 35,639,826
0.372 0.628 0.000
rs77869481 lBF = 13.1447   Chr3 : 191,374,294
0.371 0.629 0.000
rs78046234 lBF = 9.70863   Chr3 : 149,328,575
0.370 0.630 0.000
rs9846232 lBF = 0.991521   Chr3 : 13,743,132
0.367 0.632 0.000
rs56201661 lBF = 19.276   Chr3 : 189,658,609
0.368 0.632 0.000
rs12492298 lBF = 14.9582   Chr3 : 65,720,358
0.366 0.634 0.000
rs145669774 lBF = 5.67804   Chr3 : 185,545,502
0.364 0.636 0.000
rs116186330 lBF = 20.4189   Chr3 : 38,631,145
0.364 0.636 0.000
rs77496368 lBF = 12.4165   Chr3 : 122,923,739
0.364 0.636 0.000
rs62263033 lBF = 4.70416   Chr3 : 48,370,424
0.361 0.639 0.000
rs115081579 lBF = 14.3442   Chr3 : 178,513,059
0.358 0.642 0.001
rs73174703 lBF = 9.45524   Chr3 : 174,408,711
0.353 0.647 0.000
rs115772630 lBF = 20.8791   Chr3 : 115,179,396
0.353 0.647 0.000
rs114794549 lBF = 16.077   Chr3 : 105,878,935
0.352 0.648 0.000
rs74367560 lBF = 21.2296   Chr3 : 32,019,627
0.348 0.651 0.000
rs13320408 lBF = 12.2803   Chr3 : 95,441,862
0.344 0.656 0.000
rs74427637 lBF = 7.16635   Chr3 : 792,827
0.342 0.658 0.000
rs147786325 lBF = 1.81622   Chr3 : 70,725,902
0.341 0.659 0.000
rs3731189 lBF = 12.1962   Chr3 : 14,186,238
0.339 0.661 0.000
rs17665462 lBF = 11.2129   Chr3 : 117,325,769
0.338 0.662 0.000
rs17006842 lBF = 1.77826   Chr3 : 70,259,702
0.333 0.666 0.000
rs115509457 lBF = 15.7024   Chr3 : 140,430,992
0.332 0.668 0.000
rs73214037 lBF = 13.6585   Chr3 : 197,395,630
0.330 0.670 0.000
rs75430906 lBF = 0.726655   Chr3 : 20,717,929
0.328 0.672 0.000
rs62262521 lBF = 5.68817   Chr3 : 49,173,197
0.328 0.672 0.000
rs79156452 lBF = 15.6605   Chr3 : 188,651,313
0.328 0.672 0.000
rs7650851 lBF = 15.9621   Chr3 : 69,152,546
0.324 0.676 0.000
rs79733042 lBF = 12.0741   Chr3 : 146,691,517
0.316 0.684 0.000
rs80281317 lBF = 8.78243   Chr3 : 26,726,399
0.312 0.688 0.000
rs13434190 lBF = 12.8988   Chr3 : 23,150,127
0.304 0.696 0.000
rs78857545 lBF = 9.68973   Chr3 : 150,863,573
0.301 0.699 0.000
rs2290161 lBF = 15.2998   Chr3 : 12,633,168
0.301 0.699 0.000
rs78766240 lBF = 19.5029   Chr3 : 12,067,966
0.300 0.700 0.000
rs138585571 lBF = 9.02766   Chr3 : 98,188,580
0.300 0.700 0.000
rs7633054 lBF = 0.568848   Chr3 : 62,138,954
0.299 0.700 0.000
rs111771141 lBF = 14.5556   Chr3 : 6,413,411
0.299 0.701 0.000
rs295318 lBF = 14.2072   Chr3 : 141,363,176
0.299 0.701 0.000
rs78536404 lBF = 15.3069   Chr3 : 29,168,440
0.298 0.701 0.000
rs73050577 lBF = 29.1953   Chr3 : 23,853,409
0.297 0.703 0.000
rs72955118 lBF = 14.2942   Chr3 : 71,869,056
0.294 0.705 0.000
rs9813389 lBF = 7.33298   Chr3 : 131,837,290
0.295 0.705 0.000
rs12632235 lBF = 6.76759   Chr3 : 100,536,284
0.294 0.706 0.000
rs73049732 lBF = 12.0096   Chr3 : 25,343,723
0.294 0.706 0.000
rs79635565 lBF = 14.2779   Chr3 : 42,538,627
0.288 0.712 0.000
rs77678215 lBF = 11.9237   Chr3 : 186,296,358
0.283 0.716 0.000
rs116256340 lBF = 8.67079   Chr3 : 62,704,734
0.283 0.717 0.000
rs77471165 lBF = 21.1513   Chr3 : 111,395,880
0.283 0.717 0.000
rs62294780 lBF = 11.4238   Chr3 : 192,379,613
0.282 0.718 0.000
rs115860471 lBF = 16.459   Chr3 : 4,063,676
0.282 0.718 0.000
rs9310385 lBF = 12.836   Chr3 : 11,611,146
0.277 0.723 0.000
rs55962141 lBF = 15.8691   Chr3 : 194,667,220
0.276 0.724 0.000
rs62243877 lBF = 8.18156   Chr3 : 62,175,417
0.275 0.725 0.000
rs143244591 lBF = 0.893723   Chr3 : 149,013,935
0.273 0.727 0.000
rs6764132 lBF = 1.60069   Chr3 : 39,788,891
0.271 0.728 0.000
rs73020465 lBF = 10.5688   Chr3 : 3,967,749
0.271 0.729 0.000
rs73030540 lBF = 13.1929   Chr3 : 10,065,254
0.267 0.733 0.000
rs73181128 lBF = 14.6376   Chr3 : 178,122,115
0.261 0.739 0.000
rs55968350 lBF = 15.4456   Chr3 : 126,904,733
0.258 0.742 0.000
rs10490877 lBF = 11.5182   Chr3 : 188,654,595
0.254 0.746 0.001
rs190500289 lBF = 0.587391   Chr3 : 133,430,895
0.254 0.746 0.000
rs4234593 lBF = 6.52578   Chr3 : 186,074,972
0.253 0.747 0.000
rs17005356 lBF = 14.871   Chr3 : 69,153,225
0.250 0.750 0.000
rs185934952 lBF = 1.00439   Chr3 : 6,811,321
0.249 0.751 0.000
rs35348828 lBF = 15.0337   Chr3 : 177,179,941
0.242 0.758 0.000
rs76622691 lBF = 11.0479   Chr3 : 138,345,150
0.238 0.762 0.000
rs79962977 lBF = 17.5516   Chr3 : 177,306,170
0.238 0.762 0.000
rs1081575 lBF = 12.1523   Chr3 : 101,624,854
0.235 0.765 0.000
rs13085381 lBF = 10.9304   Chr3 : 145,972,179
0.234 0.766 0.000
rs56393337 lBF = 24.0855   Chr3 : 69,638,365
0.234 0.766 0.000
rs79223353 lBF = 0.90905   Chr3 : 123,139,863
0.233 0.767 0.000
rs112634398 lBF = 2.25528   Chr3 : 50,075,494
0.227 0.773 0.000
rs116063918 lBF = 15.0826   Chr3 : 187,268,411
0.225 0.775 0.000
rs114266608 lBF = 12.9331   Chr3 : 7,233,078
0.225 0.775 0.000
rs77345130 lBF = 9.73262   Chr3 : 163,126,687
0.221 0.779 0.000
rs77434118 lBF = 11.4517   Chr3 : 144,965,710
0.221 0.779 0.000
rs75024436 lBF = 14.4606   Chr3 : 50,046,446
0.217 0.782 0.001
rs13063872 lBF = 1.31572   Chr3 : 71,464,335
0.217 0.783 0.000
rs3773651 lBF = 0.54872   Chr3 : 30,718,532
0.213 0.787 0.000
rs74608138 lBF = 14.7458   Chr3 : 103,241,467
0.209 0.791 0.001
rs1397230 lBF = 10.2387   Chr3 : 161,797,310
0.209 0.791 0.000
rs9816217 lBF = 24.6833   Chr3 : 37,960,045
0.207 0.793 0.000
rs62266819 lBF = 12.7445   Chr3 : 75,016,331
0.204 0.796 0.001
rs8177313 lBF = 8.14533   Chr3 : 133,464,102
0.200 0.800 0.000
rs77960981 lBF = 12.5233   Chr3 : 35,874,989
0.199 0.801 0.000
rs111947356 lBF = 19.0029   Chr3 : 18,348,007
0.198 0.802 0.000
rs78297488 lBF = 12.029   Chr3 : 114,058,769
0.195 0.804 0.001
rs74745420 lBF = 15.0287   Chr3 : 125,702,812
0.194 0.806 0.000
rs116350627 lBF = 18.5363   Chr3 : 1,467,635
0.191 0.809 0.000
rs55786114 lBF = 1.40338   Chr3 : 48,982,335
0.189 0.811 0.000
rs1679153 lBF = 6.7364   Chr3 : 138,151,971
0.182 0.818 0.000
rs13061465 lBF = 14.9946   Chr3 : 72,568,369
0.181 0.819 0.000
rs76027185 lBF = 15.5405   Chr3 : 65,669,218
0.179 0.820 0.000
rs78889204 lBF = 11.4029   Chr3 : 36,863,059
0.176 0.824 0.000
rs55841186 lBF = 0.5772   Chr3 : 6,305,909
0.175 0.825 0.000
rs77268103 lBF = 18.4795   Chr3 : 111,483,042
0.174 0.826 0.000
rs140647181 lBF = 1.49311   Chr3 : 99,180,668
0.169 0.830 0.001
rs17038828 lBF = 6.28601   Chr3 : 39,475,342
0.168 0.832 0.000
rs73030679 lBF = 10.1305   Chr3 : 15,937,127
0.168 0.832 0.000
rs147686985 lBF = 6.61696   Chr3 : 166,728,917
0.166 0.834 0.000
rs73889852 lBF = 5.62659   Chr3 : 189,561,323
0.164 0.835 0.000
rs17237098 lBF = 8.24732   Chr3 : 185,176,901
0.163 0.836 0.000
rs116044577 lBF = 12.8773   Chr3 : 173,023,621
0.160 0.839 0.000
rs41527949 lBF = 5.62004   Chr3 : 97,728,775
0.159 0.841 0.000
rs74349719 lBF = 17.1061   Chr3 : 46,650,701
0.155 0.844 0.000
rs194706 lBF = 38.6345   Chr3 : 38,355,917
0.153 0.847 0.000
rs16861952 lBF = 10.2223   Chr3 : 149,252,824
0.152 0.848 0.000
rs9835374 lBF = 8.43592   Chr3 : 143,647,311
0.151 0.848 0.000
rs4502542 lBF = 0.221376   Chr3 : 59,921,020
0.000 0.850 0.150
rs1513326 lBF = 11.8646   Chr3 : 111,297,149
0.149 0.851 0.000
rs9837806 lBF = 20.5678   Chr3 : 161,064,585
0.149 0.851 0.000
rs189757960 lBF = 0.187248   Chr3 : 100,590,355
0.146 0.854 0.000
rs2654763 lBF = 7.55272   Chr3 : 114,043,124
0.145 0.855 0.000
rs76848853 lBF = 15.2835   Chr3 : 12,486,981
0.143 0.857 0.000
rs11919078 lBF = 43.0078   Chr3 : 37,996,268
0.142 0.858 0.000
rs62242686 lBF = 11.9408   Chr3 : 38,349,391
0.136 0.864 0.000
rs73029102 lBF = 9.63494   Chr3 : 12,009,771
0.132 0.868 0.000
rs76760096 lBF = 16.3547   Chr3 : 80,845,720
0.131 0.869 0.000
rs73184024 lBF = 7.44053   Chr3 : 121,830,755
0.129 0.871 0.000
rs16854874 lBF = 12.5904   Chr3 : 143,774,531
0.127 0.873 0.000
rs6798318 lBF = 15.5218   Chr3 : 81,391,273
0.127 0.873 0.000
rs73167108 lBF = 11.234   Chr3 : 166,673,121
0.122 0.877 0.000
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rs116317518 lBF = -0.0194502   Chr3 : 22,196,321
0.001 0.999 0.000
rs6599222 lBF = -0.0245281   Chr3 : 38,648,062
0.000 0.999 0.001
rs116554817 lBF = -0.00082088   Chr3 : 13,471,501
0.001 0.999 0.000
rs17603886 lBF = -0.010514   Chr3 : 10,484,726
0.001 0.999 0.000
rs1498095 lBF = 0.131705   Chr3 : 42,093,422
0.001 0.999 0.000
rs72995528 lBF = 0.0002031   Chr3 : 147,526,040
0.001 0.999 0.000
rs191390172 lBF = 0.00021584   Chr3 : 160,765,383
0.001 0.999 0.000
rs80021942 lBF = 0.11826   Chr3 : 161,455,962
0.001 0.999 0.000
rs146692665 lBF = 0.0265059   Chr3 : 45,384,683
0.001 0.999 0.000
rs79900979 lBF = 0.00006441   Chr3 : 195,150,497
0.001 0.999 0.000
rs9847987 lBF = -0.01068   Chr3 : 59,418,533
0.001 0.999 0.000
rs1699346 lBF = -0.119053   Chr3 : 12,504,295
0.001 0.999 0.000
rs9879311 lBF = -0.120484   Chr3 : 10,415,343
0.000 0.999 0.001
rs9825379 lBF = 0.205077   Chr3 : 141,137,035
0.001 0.999 0.000
rs1902341 lBF = -0.0607987   Chr3 : 31,795,570
0.000 0.999 0.001
rs1619599 lBF = -0.118897   Chr3 : 12,504,290
0.001 0.999 0.000
rs6795970 lBF = 1.48249   Chr3 : 38,766,675
0.000 0.999 0.001
rs150343078 lBF = 0.00011678   Chr3 : 2,873,173
0.001 0.999 0.000
rs141708090 lBF = 0.00008137   Chr3 : 14,803,109
0.001 0.999 0.000
rs187206368 lBF = 0.00007678   Chr3 : 29,081,262
0.001 0.999 0.000
rs77173971 lBF = 0.00204678   Chr3 : 147,879,431
0.001 0.999 0.000
rs144152585 lBF = 0.00006058   Chr3 : 158,912,830
0.001 0.999 0.000
rs115965187 lBF = 0.00002934   Chr3 : 178,983,060
0.001 0.999 0.000
rs17053026 lBF = 0.00002268   Chr3 : 53,418,798
0.001 0.999 0.000
rs181391108 lBF = 0.00001906   Chr3 : 22,430,822
0.001 0.999 0.000
rs138465513 lBF = 0.0000157   Chr3 : 158,734,795
0.001 0.999 0.000
rs181585632 lBF = 0.000005   Chr3 : 87,752,435
0.001 0.999 0.000
rs13082038 lBF = 0   Chr3 : 127,828,456
0.001 0.999 0.001
rs3851357 lBF = 0   Chr3 : 155,267,440
0.001 0.999 0.001
rs186451686 lBF = 0   Chr3 : 160,553,356
0.001 0.999 0.001
rs6789327 lBF = 0   Chr3 : 189,113,261
0.001 0.999 0.001
rs189326995 lBF = 0   Chr3 : 192,375,498
0.001 0.999 0.001
rs6796026 lBF = 0   Chr3 : 96,328,827
0.001 0.999 0.001

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

 
Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0186
log Bayes Factor = 35.9761
contains 2 variants
0.8795
Cluster X0108
log Bayes Factor = 155.083
contains 8 variants
0.1616
Cluster X0333
log Bayes Factor = 38.671
contains 2 variants
0.1320
Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0155
log Bayes Factor = 348.568
contains 12 variants
0.9940
Cluster X0013
log Bayes Factor = 548.265
contains 23 variants
0.9925
Cluster X0080
log Bayes Factor = 455.123
contains 21 variants
0.9090
Cluster X0189
log Bayes Factor = 149.681
contains 5 variants
0.9067
Cluster X0283
log Bayes Factor = 162.98
contains 9 variants
0.8572
Cluster X0052
log Bayes Factor = 654.387
contains 25 variants
0.8524
Cluster X0258
log Bayes Factor = 104.851
contains 6 variants
0.8485
Cluster X0014
log Bayes Factor = 131.677
contains 6 variants
0.8412
Cluster X0143
log Bayes Factor = 179.808
contains 8 variants
0.8281
Cluster X0257
log Bayes Factor = 281.184
contains 10 variants
0.8190
Cluster X0330
log Bayes Factor = 183.455
contains 2 variants
0.8168
Cluster X0109
log Bayes Factor = 257.685
contains 11 variants
0.7532
Cluster X0012
log Bayes Factor = 112.432
contains 5 variants
0.7391
Cluster X0074
log Bayes Factor = 353.38
contains 15 variants
0.7364
Cluster X0161
log Bayes Factor = 609.219
contains 20 variants
0.7102
Cluster X0038
log Bayes Factor = 31.1234
contains 2 variants
0.7001
Cluster X0120
log Bayes Factor = 79.6695
contains 4 variants
0.6908
Cluster X0018
log Bayes Factor = 430.611
contains 18 variants
0.6867
Cluster X0072
log Bayes Factor = 1189.98
contains 37 variants
0.6799
Cluster X0253
log Bayes Factor = 331.491
contains 13 variants
0.6677
Cluster X0065
log Bayes Factor = 53.0717
contains 3 variants
0.6610
Cluster X0133
log Bayes Factor = 224.204
contains 11 variants
0.6590
Cluster X0114
log Bayes Factor = 510.917
contains 25 variants
0.6575
Cluster X0067
log Bayes Factor = 179.381
contains 8 variants
0.6537
Cluster X0129
log Bayes Factor = 195.809
contains 7 variants
0.6360
Cluster X0162
log Bayes Factor = 144.479
contains 9 variants
0.6234
Cluster X0315
log Bayes Factor = 42.686
contains 2 variants
0.6163
Cluster X0222
log Bayes Factor = 431.582
contains 17 variants
0.6122
Cluster X0048
log Bayes Factor = 358.819
contains 19 variants
0.6060
Cluster X0218
log Bayes Factor = 425.579
contains 18 variants
0.6015
Cluster X0256
log Bayes Factor = 211.588
contains 9 variants
0.5794
Cluster X0274
log Bayes Factor = 454.783
contains 18 variants
0.5793
Cluster X0134
log Bayes Factor = 151.731
contains 8 variants
0.5767
Cluster X0095
log Bayes Factor = 179.348
contains 8 variants
0.5757
Cluster X0001
log Bayes Factor = 167.541
contains 7 variants
0.5728
Cluster X0119
log Bayes Factor = 114.358
contains 6 variants
0.5686
Cluster X0024
log Bayes Factor = 309.44
contains 13 variants
0.5662
Cluster X0229
log Bayes Factor = 347.165
contains 13 variants
0.5658
Cluster X0142
log Bayes Factor = 295.63
contains 12 variants
0.5579
Cluster X0227
log Bayes Factor = 249.287
contains 11 variants
0.5356
Cluster X0131
log Bayes Factor = 143.942
contains 8 variants
0.5344
Cluster X0073
log Bayes Factor = 785.614
contains 25 variants
0.5306
Cluster X0141
log Bayes Factor = 742.063
contains 30 variants
0.5234
Cluster X0070
log Bayes Factor = 421.182
contains 15 variants
0.5210
Cluster X0169
log Bayes Factor = 331.98
contains 16 variants
0.5194
Cluster X0184
log Bayes Factor = 188.416
contains 8 variants
0.5157
Cluster X0237
log Bayes Factor = 123.902
contains 6 variants
0.5144
Cluster X0039
log Bayes Factor = 463.231
contains 17 variants
0.5112
Cluster X0117
log Bayes Factor = 453.246
contains 21 variants
0.5098
Cluster X0164
log Bayes Factor = 463.793
contains 16 variants
0.5077
Cluster X0124
log Bayes Factor = 336.468
contains 13 variants
0.5042
Cluster X0071
log Bayes Factor = 131.269
contains 6 variants
0.5037
Cluster X0121
log Bayes Factor = 131.08
contains 9 variants
0.5006
Cluster X0053
log Bayes Factor = 218.825
contains 12 variants
0.4929
Cluster X0081
log Bayes Factor = 278.568
contains 10 variants
0.4880
Cluster X0213
log Bayes Factor = 405.918
contains 15 variants
0.4783
Cluster X0058
log Bayes Factor = 183.199
contains 8 variants
0.4755
Cluster X0185
log Bayes Factor = 84.7127
contains 6 variants
0.4751
Cluster X0194
log Bayes Factor = 189.9
contains 5 variants
0.4716
Cluster X0219
log Bayes Factor = 230.324
contains 15 variants
0.4709
Cluster X0153
log Bayes Factor = 328.394
contains 11 variants
0.4655
Cluster X0188
log Bayes Factor = 222.629
contains 14 variants
0.4520
Cluster X0106
log Bayes Factor = 980.916
contains 30 variants
0.4456
Cluster X0037
log Bayes Factor = 171.712
contains 6 variants
0.4449
Cluster X0085
log Bayes Factor = 138.902
contains 6 variants
0.4441
Cluster X0078
log Bayes Factor = 203.49
contains 11 variants
0.4405
Cluster X0051
log Bayes Factor = 376.793
contains 14 variants
0.4402
Cluster X0264
log Bayes Factor = 205.833
contains 10 variants
0.4355
Cluster X0032
log Bayes Factor = 255.737
contains 12 variants
0.4307
Cluster X0230
log Bayes Factor = 131.696
contains 7 variants
0.4265
Cluster X0267
log Bayes Factor = 92.4806
contains 5 variants
0.4212
Cluster X0150
log Bayes Factor = 861.091
contains 26 variants
0.4130
Cluster X0165
log Bayes Factor = 303.727
contains 12 variants
0.4120
Cluster X0083
log Bayes Factor = 351.917
contains 13 variants
0.4081
Cluster X0059
log Bayes Factor = 922.497
contains 26 variants
0.4080
Cluster X0275
log Bayes Factor = 219.726
contains 10 variants
0.4075
Cluster X0088
log Bayes Factor = 243.609
contains 9 variants
0.4074
Cluster X0180
log Bayes Factor = 410.88
contains 15 variants
0.4050
Cluster X0273
log Bayes Factor = 109.896
contains 6 variants
0.4017
Cluster X0204
log Bayes Factor = 169.796
contains 8 variants
0.3998
Cluster X0044
log Bayes Factor = 1165.44
contains 34 variants
0.3935
Cluster X0094
log Bayes Factor = 562.956
contains 18 variants
0.3929
Cluster X0197
log Bayes Factor = 158.582
contains 8 variants
0.3891
Cluster X0132
log Bayes Factor = 267.393
contains 11 variants
0.3890
Cluster X0084
log Bayes Factor = 433.078
contains 21 variants
0.3886
Cluster X0145
log Bayes Factor = 274.587
contains 11 variants
0.3753
Cluster X0269
log Bayes Factor = 155.455
contains 9 variants
0.3751
Cluster X0087
log Bayes Factor = 894.58
contains 26 variants
0.3718
Cluster X0047
log Bayes Factor = 378.621
contains 14 variants
0.3717
Cluster X0020
log Bayes Factor = 557.721
contains 18 variants
0.3707
Cluster X0049
log Bayes Factor = 597.061
contains 18 variants
0.3703
Cluster X0069
log Bayes Factor = 519.392
contains 20 variants
0.3599
Cluster X0249
log Bayes Factor = 244.457
contains 11 variants
0.3576
Cluster X0284
log Bayes Factor = 192.532
contains 9 variants
0.3496
Cluster X0268
log Bayes Factor = 213.591
contains 8 variants
0.3476
Cluster X0005
log Bayes Factor = 282.915
contains 11 variants
0.3375
Cluster X0082
log Bayes Factor = 496.905
contains 17 variants
0.3374
Cluster X0159
log Bayes Factor = 152.327
contains 7 variants
0.3369
Cluster X0276
log Bayes Factor = 187.108
contains 9 variants
0.3328
Cluster X0290
log Bayes Factor = 333.908
contains 13 variants
0.3315
Cluster X0205
log Bayes Factor = 674.183
contains 18 variants
0.3257
Cluster X0033
log Bayes Factor = 379.444
contains 13 variants
0.3239
Cluster X0171
log Bayes Factor = 291.293
contains 14 variants
0.3235
Cluster X0055
log Bayes Factor = 274.911
contains 10 variants
0.3170
Cluster X0042
log Bayes Factor = 307.243
contains 12 variants
0.3142
Cluster X0091
log Bayes Factor = 303.64
contains 12 variants
0.3120
Cluster X0079
log Bayes Factor = 413.803
contains 22 variants
0.3059
Cluster X0166
log Bayes Factor = 230.746
contains 8 variants
0.3004
Cluster X0089
log Bayes Factor = 308.747
contains 13 variants
0.3002
Cluster X0111
log Bayes Factor = 403.183
contains 18 variants
0.2972
Cluster X0113
log Bayes Factor = 49.7598
contains 3 variants
0.2916
Cluster X0193
log Bayes Factor = 303.265
contains 16 variants
0.2887
Cluster X0214
log Bayes Factor = 186.582
contains 8 variants
0.2860
Cluster X0209
log Bayes Factor = 214.798
contains 8 variants
0.2857
Cluster X0110
log Bayes Factor = 721.325
contains 13 variants
0.2823
Cluster X0167
log Bayes Factor = 136.48
contains 6 variants
0.2818
Cluster X0174
log Bayes Factor = 214.209
contains 8 variants
0.2808
Cluster X0224
log Bayes Factor = 278.692
contains 11 variants
0.2801
Cluster X0221
log Bayes Factor = 149.378
contains 10 variants
0.2797
Cluster X0046
log Bayes Factor = 387.972
contains 16 variants
0.2790
Cluster X0123
log Bayes Factor = 382.779
contains 14 variants
0.2770
Cluster X0128
log Bayes Factor = 148.918
contains 15 variants
0.2748
Cluster X0277
log Bayes Factor = 726.213
contains 23 variants
0.2724
Cluster X0157
log Bayes Factor = 172.957
contains 8 variants
0.2721
Cluster X0191
log Bayes Factor = 163.555
contains 8 variants
0.2593
Cluster X0271
log Bayes Factor = 256.743
contains 10 variants
0.2571
Cluster X0028
log Bayes Factor = 120.445
contains 7 variants
0.2514
Cluster X0147
log Bayes Factor = 133.509
contains 9 variants
0.2511
Cluster X0212
log Bayes Factor = 300.777
contains 10 variants
0.2505
Cluster X0263
log Bayes Factor = 240.36
contains 13 variants
0.2497
Cluster X0026
log Bayes Factor = 232.119
contains 9 variants
0.2497
Cluster X0220
log Bayes Factor = 142.284
contains 7 variants
0.2478
Cluster X0232
log Bayes Factor = 695.273
contains 23 variants
0.2477
Cluster X0093
log Bayes Factor = 289.878
contains 10 variants
0.2438
Cluster X0182
log Bayes Factor = 91.4459
contains 4 variants
0.2407
Cluster X0127
log Bayes Factor = 276.004
contains 14 variants
0.2382
Cluster X0126
log Bayes Factor = 384.432
contains 15 variants
0.2360
Cluster X0248
log Bayes Factor = 254.854
contains 10 variants
0.2343
Cluster X0240
log Bayes Factor = 104.862
contains 6 variants
0.2305
Cluster X0154
log Bayes Factor = 282.084
contains 12 variants
0.2291
Cluster X0181
log Bayes Factor = 141.396
contains 6 variants
0.2278
Cluster X0195
log Bayes Factor = 167.337
contains 13 variants
0.2255
Cluster X0030
log Bayes Factor = 216.364
contains 9 variants
0.2248
Cluster X0298
log Bayes Factor = 220.671
contains 1 variants
0.2245
Cluster X0301
log Bayes Factor = 297.489
contains 2 variants
0.2222
Cluster X0068
log Bayes Factor = 127.774
contains 6 variants
0.2212
Cluster X0086
log Bayes Factor = 131.002
contains 8 variants
0.2191
Cluster X0293
log Bayes Factor = 169.051
contains 7 variants
0.2183
Cluster X0261
log Bayes Factor = 420.614
contains 20 variants
0.2167
Cluster X0328
log Bayes Factor = 380.087
contains 8 variants
0.2130
Cluster X0050
log Bayes Factor = 397.79
contains 16 variants
0.2118
Cluster X0040
log Bayes Factor = 542.747
contains 16 variants
0.2099
Cluster X0043
log Bayes Factor = 517.108
contains 20 variants
0.2042
Cluster X0100
log Bayes Factor = 730.252
contains 26 variants
0.2030
Cluster X0332
log Bayes Factor = 65.2374
contains 3 variants
0.2015
Cluster X0064
log Bayes Factor = 166.06
contains 10 variants
0.1991
Cluster X0160
log Bayes Factor = 99.5328
contains 9 variants
0.1955
Cluster X0140
log Bayes Factor = 164.536
contains 8 variants
0.1917
Cluster X0210
log Bayes Factor = 426.159
contains 17 variants
0.1878
Cluster X0156
log Bayes Factor = 226.954
contains 9 variants
0.1868
Cluster X0063
log Bayes Factor = 107.557
contains 5 variants
0.1866
Cluster X0015
log Bayes Factor = 356.23
contains 15 variants
0.1863
Cluster X0029
log Bayes Factor = 709.102
contains 23 variants
0.1857
Cluster X0244
log Bayes Factor = 122.647
contains 5 variants
0.1856
Cluster X0178
log Bayes Factor = 225.6
contains 9 variants
0.1836
Cluster X0203
log Bayes Factor = 363.522
contains 11 variants
0.1813
Cluster X0098
log Bayes Factor = 246.226
contains 8 variants
0.1785
Cluster X0172
log Bayes Factor = 80.2701
contains 3 variants
0.1753
Cluster X0122
log Bayes Factor = 219.114
contains 9 variants
0.1734
Cluster X0075
log Bayes Factor = 431.344
contains 16 variants
0.1727
Cluster X0077
log Bayes Factor = 571.533
contains 17 variants
0.1713
Cluster X0057
log Bayes Factor = 439.35
contains 16 variants
0.1691
Cluster X0019
log Bayes Factor = 372.36
contains 16 variants
0.1686
Cluster X0163
log Bayes Factor = 122.554
contains 6 variants
0.1633
Cluster X0320
log Bayes Factor = 110.964
contains 6 variants
0.1612
Cluster X0226
log Bayes Factor = 145.726
contains 8 variants
0.1605
Cluster X0192
log Bayes Factor = 402.511
contains 14 variants
0.1564
Cluster X0259
log Bayes Factor = 246.237
contains 11 variants
0.1543
Cluster X0146
log Bayes Factor = 686.343
contains 22 variants
0.1536
Cluster X0021
log Bayes Factor = 338.631
contains 13 variants
0.1501
Cluster X0139
log Bayes Factor = 304.555
contains 10 variants
0.1491
Cluster X0170
log Bayes Factor = 264.081
contains 11 variants
0.1471
Cluster X0201
log Bayes Factor = 368.049
contains 13 variants
0.1459
Cluster X0177
log Bayes Factor = 254.872
contains 10 variants
0.1405
Cluster X0041
log Bayes Factor = 306.192
contains 14 variants
0.1373
Cluster X0061
log Bayes Factor = 293.105
contains 15 variants
0.1371
Cluster X0045
log Bayes Factor = 446.264
contains 16 variants
0.1335
Cluster X0152
log Bayes Factor = 331.156
contains 10 variants
0.1318
Cluster X0176
log Bayes Factor = 407.797
contains 14 variants
0.1313
Cluster X0223
log Bayes Factor = 122.347
contains 7 variants
0.1272
Cluster X0138
log Bayes Factor = 43.7891
contains 4 variants
0.1234
Cluster X0107
log Bayes Factor = 151.016
contains 1 variants
0.1226
Cluster X0054
log Bayes Factor = 197.338
contains 9 variants
0.1175
Cluster X0148
log Bayes Factor = 315.237
contains 11 variants
0.1124
Cluster X0035
log Bayes Factor = 620.567
contains 37 variants
0.0990
Cluster X0125
log Bayes Factor = 215.738
contains 7 variants
0.0975
Cluster X0004
log Bayes Factor = 32.8452
contains 2 variants
0.0886
Cluster X0208
log Bayes Factor = 40.6733
contains 2 variants
0.0880
Cluster X0007
log Bayes Factor = 107.567
contains 7 variants
0.0759
Cluster X0234
log Bayes Factor = 28.8983
contains 2 variants
0.0702
Cluster X0246
log Bayes Factor = 121.08
contains 5 variants
0.0698
Cluster X0238
log Bayes Factor = 97.9307
contains 4 variants
0.0664
Cluster X0324
log Bayes Factor = 32.1341
contains 1 variants
0.0636
Cluster X0323
log Bayes Factor = 180.399
contains 5 variants
0.0612
Cluster X0297
log Bayes Factor = 63.8292
contains 4 variants
0.0612
Cluster X0278
log Bayes Factor = 173.437
contains 11 variants
0.0601
Cluster X0236
log Bayes Factor = 83.9265
contains 3 variants
0.0568
Cluster X0199
log Bayes Factor = 350.038
contains 3 variants
0.0515
Cluster X0243
log Bayes Factor = 104.974
contains 6 variants
0.0506
 
 

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

This website was created, designed, and edited by ORCID iD iconPatrick K. Albers

The contents of TreeWAS.org are available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) with attribution (citation) required.

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