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Variant clusters
Hospitalization Episode Statistics (HES)
Genetic variants: 36,212
Diagnostic terms: × 19,155
Association results: = 693,640,860
Self-Reported Statistics (SRS)
Genetic variants: 28,458
Diagnostic terms: × 474
Association results: = 13,489,092
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Diagnostic term associations

Hospitalization Episode Statistics (HES)

Q04.2
Holoprosencephaly
Parent term
Q04 Other congenital malformations of brain
What are diagnostic terms?
Variant effects

Click on a variant to see its association results.

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Genome-wide   Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Results table
Variant Risk
posterior probability
 No effect
posterior probability
 Protective
posterior probability
  
rs3864302 lBF = 77.5578   Chr6 : 32,278,792
0.540 0.460 0.000
rs3096673 lBF = 78.873   Chr6 : 32,238,013
0.539 0.461 0.000
rs3130340 lBF = 76.5037   Chr6 : 32,244,627
0.537 0.463 0.000
rs7751896 lBF = 75.8342   Chr6 : 32,255,410
0.536 0.463 0.000
rs3132928 lBF = 75.6443   Chr6 : 32,234,015
0.536 0.464 0.000
rs1018430 lBF = 76.6565   Chr6 : 32,281,688
0.535 0.464 0.000
rs3115569 lBF = 76.7928   Chr6 : 32,224,139
0.535 0.465 0.000
rs6909427 lBF = 79.0866   Chr6 : 32,268,701
0.535 0.465 0.000
rs6935269 lBF = 77.7504   Chr6 : 32,260,350
0.535 0.465 0.000
rs9268055 lBF = 76.1528   Chr6 : 32,230,608
0.534 0.465 0.000
rs3115560 lBF = 76.4939   Chr6 : 32,236,142
0.534 0.466 0.000
rs3096681 lBF = 77.0179   Chr6 : 32,235,177
0.534 0.466 0.000
rs3749966 lBF = 76.6498   Chr6 : 32,261,507
0.534 0.466 0.000
rs7767325 lBF = 77.4929   Chr6 : 32,233,886
0.529 0.471 0.000
rs3115553 lBF = 75.8613   Chr6 : 32,245,827
0.528 0.472 0.000
rs3115563 lBF = 76.6493   Chr6 : 32,233,638
0.517 0.482 0.000
rs7742654 lBF = 78.9886   Chr6 : 32,271,443
0.507 0.493 0.000
rs9268167 lBF = 87.3034   Chr6 : 32,272,437
0.507 0.493 0.000
rs9268213 lBF = 86.1367   Chr6 : 32,282,081
0.505 0.494 0.000
rs7341328 lBF = 77.795   Chr6 : 32,275,194
0.505 0.495 0.000
rs1018434 lBF = 86.6385   Chr6 : 32,281,360
0.504 0.495 0.000
rs111945767 lBF = 255.895   Chr6 : 32,517,045
0.504 0.496 0.000
rs521828 lBF = 280.231   Chr6 : 32,291,643
0.502 0.497 0.000
rs6934429 lBF = 84.5686   Chr6 : 32,279,622
0.501 0.499 0.000
rs3864300 lBF = 83.9992   Chr6 : 32,271,807
0.500 0.500 0.000
rs6909790 lBF = 83.6247   Chr6 : 32,282,979
0.500 0.500 0.000
rs6915455 lBF = 82.932   Chr6 : 32,283,494
0.499 0.501 0.000
rs1018433 lBF = 85.4992   Chr6 : 32,281,510
0.499 0.501 0.000
rs2744971 lBF = 35.63   Chr6 : 34,581,636
0.497 0.503 0.000
rs241429 lBF = 122.708   Chr6 : 32,803,840
0.496 0.504 0.000
rs2814993 lBF = 37.1636   Chr6 : 34,618,893
0.495 0.505 0.000
rs9268165 lBF = 78.52   Chr6 : 32,272,327
0.495 0.505 0.000
rs6938239 lBF = 34.3464   Chr6 : 34,683,635
0.493 0.507 0.000
rs9268212 lBF = 85.5709   Chr6 : 32,281,889
0.492 0.508 0.000
rs2814944 lBF = 36.7641   Chr6 : 34,552,797
0.492 0.508 0.000
rs3132931 lBF = 84.3484   Chr6 : 32,235,895
0.491 0.508 0.000
rs9268176 lBF = 84.555   Chr6 : 32,274,079
0.491 0.509 0.000
rs9257182 lBF = 117.786   Chr6 : 28,754,817
0.491 0.509 0.000
rs1559873 lBF = 85.3626   Chr6 : 32,243,129
0.491 0.509 0.000
rs3130955 lBF = 179.933   Chr6 : 31,054,511
0.490 0.510 0.000
rs6934776 lBF = 85.8605   Chr6 : 32,279,816
0.490 0.510 0.000
rs7383287 lBF = 68.1186   Chr6 : 32,783,086
0.490 0.510 0.000
rs16894959 lBF = 30.3222   Chr6 : 34,825,662
0.489 0.511 0.000
rs9268137 lBF = 85.7285   Chr6 : 32,255,269
0.488 0.512 0.000
rs11735066 lBF = 5.27666   Chr4 : 53,298,388
0.488 0.512 0.000
rs9469890 lBF = 33.5115   Chr6 : 34,763,982
0.487 0.513 0.000
rs3800461 lBF = 38.5883   Chr6 : 34,616,322
0.486 0.513 0.000
rs9469913 lBF = 16.491   Chr6 : 34,827,085
0.486 0.514 0.000
rs2143462 lBF = 111.792   Chr6 : 32,335,204
0.485 0.514 0.000
rs9268125 lBF = 86.2747   Chr6 : 32,252,678
0.485 0.515 0.000
rs1559874 lBF = 81.7562   Chr6 : 32,243,155
0.485 0.515 0.000
rs761188 lBF = 150.768   Chr6 : 32,317,973
0.484 0.515 0.000
rs2143461 lBF = 117.85   Chr6 : 32,335,347
0.484 0.515 0.000
rs3129937 lBF = 115.647   Chr6 : 32,336,364
0.484 0.516 0.000
rs9268197 lBF = 84.1219   Chr6 : 32,277,934
0.483 0.517 0.000
rs3828840 lBF = 272.834   Chr6 : 32,520,907
0.482 0.518 0.000
rs3129926 lBF = 114.929   Chr6 : 32,333,480
0.482 0.518 0.000
rs9268135 lBF = 85.8206   Chr6 : 32,255,230
0.481 0.518 0.000
rs6457536 lBF = 82.0453   Chr6 : 32,273,765
0.481 0.519 0.000
rs3129939 lBF = 115.58   Chr6 : 32,336,766
0.481 0.519 0.000
rs17104944 lBF = 5.05105   Chr14 : 37,143,742
0.481 0.519 0.000
rs1033499 lBF = 120.165   Chr6 : 32,307,532
0.480 0.519 0.000
rs9271060 lBF = 261.575   Chr6 : 32,575,513
0.479 0.521 0.000
rs9271100 lBF = 261.675   Chr6 : 32,576,478
0.479 0.521 0.000
rs9271192 lBF = 261.325   Chr6 : 32,578,530
0.478 0.522 0.000
rs3129924 lBF = 114.495   Chr6 : 32,333,299
0.478 0.522 0.000
rs72851052 lBF = 261.226   Chr6 : 32,502,249
0.477 0.522 0.000
rs9268202 lBF = 81.6138   Chr6 : 32,279,340
0.476 0.524 0.000
rs9268231 lBF = 109.419   Chr6 : 32,287,754
0.475 0.525 0.000
rs9268153 lBF = 114.869   Chr6 : 32,264,179
0.475 0.525 0.000
rs2157338 lBF = 85.9562   Chr6 : 32,439,323
0.474 0.526 0.000
rs1150765 lBF = 304.593   Chr6 : 31,127,562
0.473 0.527 0.000
rs9276556 lBF = 47.6167   Chr6 : 32,723,233
0.472 0.528 0.000
rs9269149 lBF = 81.9951   Chr6 : 32,445,660
0.471 0.528 0.000
rs9268977 lBF = 81.7979   Chr6 : 32,434,939
0.471 0.529 0.000
rs4434496 lBF = 81.5662   Chr6 : 32,430,508
0.471 0.529 0.000
rs9268862 lBF = 82.0613   Chr6 : 32,430,167
0.471 0.529 0.000
rs3132564 lBF = 137.365   Chr6 : 31,047,620
0.471 0.529 0.000
rs9268856 lBF = 82.1309   Chr6 : 32,429,719
0.470 0.529 0.000
rs9268973 lBF = 82.169   Chr6 : 32,434,778
0.470 0.530 0.000
rs6910668 lBF = 115.058   Chr6 : 32,263,458
0.469 0.531 0.000
rs209181 lBF = 143.701   Chr6 : 28,792,477
0.469 0.531 0.000
rs915894 lBF = 219.818   Chr6 : 32,190,390
0.469 0.531 0.000
rs6912002 lBF = 178.474   Chr6 : 32,765,268
0.469 0.531 0.000
rs9268220 lBF = 115.296   Chr6 : 32,284,340
0.468 0.532 0.000
rs9276734 lBF = 178.832   Chr6 : 32,766,854
0.468 0.532 0.000
rs11742133 lBF = 8.36622   Chr5 : 155,268,373
0.468 0.532 0.000
rs345166 lBF = 7.71775   Chr17 : 58,209,589
0.468 0.532 0.000
rs2765220 lBF = 145.929   Chr6 : 28,769,671
0.468 0.532 0.000
rs1076712 lBF = 150.489   Chr6 : 32,300,152
0.468 0.532 0.000
rs2076537 lBF = 149.041   Chr6 : 32,317,635
0.467 0.532 0.000
rs9268885 lBF = 80.4183   Chr6 : 32,431,705
0.467 0.533 0.000
rs7381376 lBF = 178.508   Chr6 : 32,767,673
0.466 0.534 0.000
rs7382714 lBF = 181.162   Chr6 : 32,767,496
0.466 0.534 0.000
rs3129683 lBF = 143.965   Chr6 : 29,286,670
0.466 0.534 0.000
rs2734985 lBF = 103.334   Chr6 : 29,818,662
0.465 0.534 0.000
rs7383606 lBF = 179.21   Chr6 : 32,766,593
0.465 0.534 0.000
rs1383261 lBF = 177.515   Chr6 : 32,765,451
0.465 0.535 0.000
rs7756177 lBF = 109.274   Chr6 : 32,289,358
0.465 0.535 0.000
rs3129943 lBF = 105.956   Chr6 : 32,338,695
0.465 0.535 0.000
rs202118863 lBF = 260.489   Chr6 : 32,520,509
0.465 0.535 0.000
Affx-28471855 lBF = 148.585   Chr6 : 32,317,859
0.464 0.536 0.000
rs6899857 lBF = 178.897   Chr6 : 32,770,482
0.464 0.536 0.000
rs910050 lBF = 149.617   Chr6 : 32,315,654
0.464 0.536 0.000
rs9271894 lBF = 86.7233   Chr6 : 32,595,874
0.464 0.536 0.000
rs1015166 lBF = 175.874   Chr6 : 32,798,731
0.462 0.538 0.000
rs3095267 lBF = 105.681   Chr6 : 29,607,046
0.462 0.538 0.000
rs7382649 lBF = 178.914   Chr6 : 32,776,087
0.461 0.539 0.000
rs9271709 lBF = 90.5678   Chr6 : 32,593,392
0.460 0.540 0.000
rs29218 lBF = 105.895   Chr6 : 29,607,429
0.460 0.540 0.000
rs12612420 lBF = 8.25246   Chr2 : 201,158,122
0.459 0.540 0.000
rs9271489 lBF = 91.561   Chr6 : 32,589,051
0.459 0.541 0.000
rs74859699 lBF = 18.3331   Chr1 : 154,739,875
0.457 0.543 0.000
rs3129942 lBF = 107.994   Chr6 : 32,338,283
0.457 0.543 0.000
rs17574546 lBF = 13.6695   Chr15 : 38,902,476
0.457 0.543 0.000
rs16967103 lBF = 14.2899   Chr15 : 38,899,190
0.456 0.544 0.000
rs9276607 lBF = 45.6467   Chr6 : 32,737,257
0.455 0.544 0.000
rs80124314 lBF = 6.72987   Chr9 : 30,283,216
0.455 0.545 0.000
rs73727981 lBF = 257.099   Chr6 : 32,511,791
0.455 0.545 0.000
rs2858867 lBF = 291.547   Chr6 : 32,575,325
0.455 0.545 0.000
rs915895 lBF = 208.157   Chr6 : 32,190,217
0.455 0.545 0.000
rs9276606 lBF = 193.378   Chr6 : 32,736,695
0.454 0.545 0.000
rs73154010 lBF = 6.16515   Chr3 : 161,840,540
0.454 0.546 0.000
rs2747421 lBF = 99.6117   Chr6 : 29,645,118
0.454 0.546 0.000
rs13134336 lBF = 7.7124   Chr4 : 68,270,725
0.452 0.548 0.000
rs615672 lBF = 289.555   Chr6 : 32,574,171
0.452 0.548 0.000
rs2301601 lBF = 7.06119   Chr16 : 23,366,528
0.451 0.549 0.000
rs1062630 lBF = 299.357   Chr6 : 31,138,107
0.451 0.549 0.000
rs2535238 lBF = 100.36   Chr6 : 29,645,038
0.450 0.550 0.000
rs753057 lBF = 7.13839   Chr13 : 113,797,801
0.450 0.550 0.000
rs9276555 lBF = 47.5727   Chr6 : 32,722,754
0.449 0.550 0.000
rs9269831 lBF = 259.034   Chr6 : 32,550,012
0.449 0.551 0.000
rs375984 lBF = 101.301   Chr6 : 29,644,502
0.448 0.551 0.000
rs9273363 lBF = 489.584   Chr6 : 32,626,272
0.448 0.551 0.000
rs71562646 lBF = 9.54905   Chr7 : 104,827,587
0.448 0.552 0.000
rs5004277 lBF = 99.9987   Chr6 : 32,582,354
0.448 0.552 0.000
rs9271425 lBF = 129.757   Chr6 : 32,587,923
0.447 0.553 0.000
rs9269822 lBF = 259.668   Chr6 : 32,549,810
0.447 0.553 0.000
rs1611701 lBF = 159.353   Chr6 : 29,827,956
0.447 0.553 0.000
rs204993 lBF = 249.805   Chr6 : 32,155,581
0.447 0.553 0.000
rs204999 lBF = 225.279   Chr6 : 32,109,979
0.446 0.554 0.000
rs62406374 lBF = 10.4194   Chr6 : 49,872,818
0.446 0.554 0.000
rs3130455 lBF = 310.319   Chr6 : 31,125,978
0.445 0.555 0.000
rs7171171 lBF = 15.3328   Chr15 : 38,907,041
0.445 0.555 0.000
rs77637983 lBF = 255.816   Chr6 : 32,549,452
0.445 0.555 0.000
rs11755266 lBF = 10.3238   Chr6 : 35,162,141
0.445 0.555 0.000
rs7159950 lBF = 5.65025   Chr14 : 57,180,779
0.444 0.556 0.000
rs75730783 lBF = 6.34573   Chr1 : 158,404,601
0.444 0.556 0.000
rs113529884 lBF = 245.207   Chr6 : 32,553,828
0.444 0.556 0.000
rs1008977 lBF = 9.74733   Chr17 : 10,709,674
0.443 0.557 0.000
rs7853605 lBF = 7.60017   Chr9 : 96,213,529
0.442 0.558 0.000
rs3129890 lBF = 86.6135   Chr6 : 32,414,273
0.442 0.558 0.000
rs115302848 lBF = 9.63821   Chr2 : 210,941,688
0.442 0.558 0.000
rs204992 lBF = 357.269   Chr6 : 32,156,908
0.441 0.558 0.000
rs12589674 lBF = 5.86884   Chr14 : 54,246,353
0.441 0.558 0.000
rs17176768 lBF = 11.8039   Chr14 : 37,151,905
0.441 0.559 0.000
rs652888 lBF = 121.496   Chr6 : 31,851,234
0.441 0.559 0.000
rs176095 lBF = 360.117   Chr6 : 32,158,319
0.440 0.559 0.000
rs4151664 lBF = 61.8333   Chr6 : 31,920,873
0.440 0.559 0.000
rs3130457 lBF = 312.696   Chr6 : 31,147,194
0.440 0.560 0.000
rs9268861 lBF = 393.477   Chr6 : 32,429,894
0.439 0.561 0.000
rs75729340 lBF = 21.0937   Chr18 : 31,480,742
0.439 0.561 0.000
rs2814982 lBF = 11.8908   Chr6 : 34,546,560
0.438 0.562 0.000
rs74980942 lBF = 19.1141   Chr4 : 129,597,399
0.438 0.562 0.000
rs117464630 lBF = 8.83519   Chr10 : 81,006,391
0.437 0.562 0.000
rs10424702 lBF = 9.34888   Chr19 : 19,508,013
0.437 0.562 0.000
rs3094176 lBF = 164.456   Chr6 : 29,821,270
0.437 0.562 0.000
rs707928 lBF = 282.972   Chr6 : 31,742,590
0.437 0.563 0.000
rs13137792 lBF = 5.15648   Chr4 : 178,198,741
0.437 0.563 0.000
rs75355801 lBF = 8.34629   Chr1 : 50,185,751
0.437 0.563 0.000
rs9273364 lBF = 475.788   Chr6 : 32,626,302
0.437 0.563 0.000
rs1265159 lBF = 312.664   Chr6 : 31,140,047
0.436 0.564 0.000
rs12310380 lBF = 8.99711   Chr12 : 104,478,790
0.436 0.564 0.000
rs76754356 lBF = 6.7613   Chr20 : 10,719,667
0.436 0.564 0.000
rs16986856 lBF = 0.891232   Chr19 : 56,497,960
0.436 0.564 0.000
rs204995 lBF = 73.8651   Chr6 : 32,154,285
0.435 0.564 0.000
rs117231330 lBF = 14.3463   Chr15 : 81,214,019
0.435 0.565 0.000
rs3129063 lBF = 114.119   Chr6 : 29,645,613
0.435 0.565 0.000
rs3096674 lBF = 85.1077   Chr6 : 32,238,219
0.434 0.566 0.000
rs204994 lBF = 75.1027   Chr6 : 32,154,998
0.433 0.567 0.000
rs130071 lBF = 200.735   Chr6 : 31,116,210
0.433 0.567 0.000
rs707929 lBF = 287.181   Chr6 : 31,742,067
0.433 0.567 0.000
rs113373865 lBF = 13.4513   Chr8 : 67,091,991
0.432 0.568 0.000
rs8004189 lBF = 7.62138   Chr14 : 89,394,467
0.432 0.568 0.000
rs11244 lBF = 255.169   Chr6 : 32,780,724
0.432 0.568 0.000
rs78791620 lBF = 9.49824   Chr9 : 2,523,805
0.432 0.568 0.000
rs3129891 lBF = 352.967   Chr6 : 32,415,080
0.432 0.568 0.000
rs9276357 lBF = 44.734   Chr6 : 32,706,559
0.432 0.568 0.000
rs2517870 lBF = 101.883   Chr6 : 29,818,744
0.431 0.569 0.000
rs79665456 lBF = 13.4635   Chr17 : 36,203,084
0.431 0.569 0.000
rs130079 lBF = 308.561   Chr6 : 31,112,737
0.431 0.569 0.000
rs3094116 lBF = 185.203   Chr6 : 30,738,408
0.431 0.569 0.000
rs77685854 lBF = 10.8777   Chr3 : 32,897,040
0.430 0.570 0.000
rs1611635 lBF = 168.105   Chr6 : 29,836,463
0.429 0.571 0.000
rs77840280 lBF = 11.8941   Chr13 : 36,279,658
0.429 0.571 0.000
rs6911628 lBF = 183.308   Chr6 : 30,739,846
0.428 0.571 0.000
rs10485941 lBF = 13.0188   Chr7 : 49,439,427
0.428 0.571 0.000
rs887465 lBF = 316.44   Chr6 : 31,143,652
0.428 0.572 0.000
rs1265114 lBF = 217.1   Chr6 : 31,117,188
0.428 0.572 0.000
rs34509109 lBF = 14.2252   Chr7 : 108,364,500
0.428 0.572 0.000
rs111751241 lBF = 9.57727   Chr1 : 183,349,952
0.428 0.572 0.000
rs6901541 lBF = 390.408   Chr6 : 32,442,261
0.427 0.573 0.000
rs9276726 lBF = 191.154   Chr6 : 32,763,888
0.427 0.573 0.000
rs2107203 lBF = 78.4534   Chr6 : 29,669,830
0.426 0.573 0.000
rs10490871 lBF = 6.36422   Chr3 : 35,667,761
0.426 0.573 0.000
rs9275659 lBF = 44.8216   Chr6 : 32,686,103
0.426 0.574 0.000
rs12185044 lBF = 5.81853   Chr14 : 37,172,516
0.426 0.574 0.000
rs80106031 lBF = 15.0769   Chr10 : 13,083,001
0.425 0.575 0.000
rs7089656 lBF = 10.3905   Chr10 : 22,284,140
0.425 0.575 0.000
rs1622289 lBF = 17.2268   Chr7 : 157,567,732
0.425 0.575 0.000
rs9267677 lBF = 81.4571   Chr6 : 31,892,641
0.424 0.575 0.000
rs3132947 lBF = 120.316   Chr6 : 32,176,782
0.424 0.576 0.000
rs12910916 lBF = 24.3202   Chr15 : 47,675,655
0.424 0.576 0.000
rs4394270 lBF = 39.734   Chr6 : 32,709,964
0.424 0.576 0.000
rs7021724 lBF = 11.9942   Chr9 : 2,527,900
0.423 0.576 0.000
rs502771 lBF = 134.013   Chr6 : 32,578,970
0.423 0.577 0.000
rs9275660 lBF = 44.9982   Chr6 : 32,686,196
0.423 0.577 0.000
rs17156090 lBF = 8.64867   Chr7 : 108,339,862
0.423 0.577 0.000
rs17301128 lBF = 90.5348   Chr6 : 28,308,034
0.423 0.577 0.000
rs154980 lBF = 8.79518   Chr6 : 32,882,799
0.423 0.577 0.000
rs12437393 lBF = 11.2266   Chr14 : 21,635,714
0.423 0.577 0.000
rs12231974 lBF = 6.07834   Chr12 : 67,095,378
0.423 0.577 0.000
rs3135393 lBF = 255.761   Chr6 : 32,408,842
0.422 0.577 0.000
rs4349008 lBF = 7.91478   Chr13 : 105,803,056
0.422 0.577 0.000
rs2780226 lBF = 5.10037   Chr6 : 34,199,092
0.422 0.578 0.000
rs2859090 lBF = 49.2713   Chr6 : 32,700,833
0.422 0.578 0.000
rs9267673 lBF = 79.7719   Chr6 : 31,883,679
0.421 0.578 0.000
rs5013088 lBF = 102.704   Chr6 : 29,820,389
0.421 0.579 0.000
rs805294 lBF = 275.309   Chr6 : 31,688,217
0.421 0.579 0.000
rs11965763 lBF = 126.728   Chr6 : 33,076,682
0.421 0.579 0.000
rs3130573 lBF = 164.344   Chr6 : 31,106,268
0.421 0.579 0.000
rs2239805 lBF = 253.83   Chr6 : 32,411,376
0.421 0.579 0.000
rs3134605 lBF = 121.175   Chr6 : 32,159,956
0.421 0.579 0.000
rs3094114 lBF = 183.094   Chr6 : 30,738,921
0.420 0.580 0.000
rs9984110 lBF = 5.56   Chr21 : 31,447,366
0.420 0.580 0.000
rs1235162 lBF = 240.328   Chr6 : 29,537,224
0.420 0.580 0.000
rs17511643 lBF = 7.08446   Chr14 : 79,666,567
0.419 0.581 0.000
rs3129012 lBF = 168.733   Chr6 : 29,988,642
0.419 0.581 0.000
rs1980493 lBF = 273.275   Chr6 : 32,363,215
0.418 0.581 0.000
rs11702983 lBF = 16.3059   Chr22 : 29,737,071
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0.412 0.588 0.000
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0.412 0.588 0.000
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0.411 0.588 0.000
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0.411 0.589 0.000
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0.411 0.589 0.000
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0.409 0.591 0.000
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0.409 0.591 0.000
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0.408 0.592 0.000
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0.407 0.593 0.000
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0.406 0.594 0.000
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0.406 0.594 0.000
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0.405 0.595 0.000
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0.405 0.595 0.000
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0.397 0.602 0.000
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0.397 0.603 0.000
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rs1228075 lBF = 5.39429   Chr2 : 146,608,872
0.390 0.609 0.000
rs3134945 lBF = 100.753   Chr6 : 32,146,492
0.390 0.609 0.000
rs3131379 lBF = 372.271   Chr6 : 31,721,033
0.390 0.609 0.000
rs117414778 lBF = 9.84757   Chr11 : 122,198,886
0.390 0.609 0.000
rs3117575 lBF = 370.531   Chr6 : 31,726,253
0.390 0.609 0.000
rs78687901 lBF = 17.8934   Chr3 : 173,074,141
0.390 0.609 0.000
rs2763979 lBF = 290.128   Chr6 : 31,794,592
0.390 0.610 0.000
rs3117425 lBF = 206.73   Chr6 : 29,260,431
0.390 0.610 0.000
rs13194504 lBF = 204.013   Chr6 : 28,630,691
0.390 0.610 0.000
rs41272485 lBF = 12.7038   Chr1 : 170,135,693
0.390 0.610 0.000
rs3132449 lBF = 379.265   Chr6 : 31,626,013
0.390 0.610 0.000
rs75222804 lBF = 5.30224   Chr5 : 112,525,356
0.390 0.610 0.000
rs3131378 lBF = 371.074   Chr6 : 31,725,285
0.390 0.610 0.000
rs9272729 lBF = 402.73   Chr6 : 32,609,594
0.390 0.610 0.000
rs34393743 lBF = 12.8628   Chr10 : 90,304,313
0.390 0.610 0.000
rs17411949 lBF = 4.20269   Chr3 : 140,099,693
0.389 0.610 0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

 
Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0335
log Bayes Factor = 12.3689
contains 1 variants
0.2065
Cluster X0333
log Bayes Factor = 38.671
contains 2 variants
0.1726
Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0035
log Bayes Factor = 620.567
contains 37 variants
0.6633
Cluster X0193
log Bayes Factor = 303.265
contains 16 variants
0.5894
Cluster X0219
log Bayes Factor = 230.324
contains 15 variants
0.5687
Cluster X0028
log Bayes Factor = 120.445
contains 7 variants
0.5388
Cluster X0169
log Bayes Factor = 331.98
contains 16 variants
0.5277
Cluster X0053
log Bayes Factor = 218.825
contains 12 variants
0.5183
Cluster X0226
log Bayes Factor = 145.726
contains 8 variants
0.5162
Cluster X0266
log Bayes Factor = 95.1792
contains 5 variants
0.5138
Cluster X0072
log Bayes Factor = 1189.98
contains 37 variants
0.5136
Cluster X0052
log Bayes Factor = 654.387
contains 25 variants
0.5135
Cluster X0339
log Bayes Factor = 56.078
contains 2 variants
0.5131
Cluster X0106
log Bayes Factor = 980.916
contains 30 variants
0.5131
Cluster X0069
log Bayes Factor = 519.392
contains 20 variants
0.5126
Cluster X0171
log Bayes Factor = 291.293
contains 14 variants
0.5120
Cluster X0013
log Bayes Factor = 548.265
contains 23 variants
0.5118
Cluster X0146
log Bayes Factor = 686.343
contains 22 variants
0.5053
Cluster X0274
log Bayes Factor = 454.783
contains 18 variants
0.5040
Cluster X0043
log Bayes Factor = 517.108
contains 20 variants
0.5040
Cluster X0073
log Bayes Factor = 785.614
contains 25 variants
0.5040
Cluster X0150
log Bayes Factor = 861.091
contains 26 variants
0.5015
Cluster X0111
log Bayes Factor = 403.183
contains 18 variants
0.5006
Cluster X0051
log Bayes Factor = 376.793
contains 14 variants
0.4991
Cluster X0154
log Bayes Factor = 282.084
contains 12 variants
0.4957
Cluster X0021
log Bayes Factor = 338.631
contains 13 variants
0.4956
Cluster X0068
log Bayes Factor = 127.774
contains 6 variants
0.4948
Cluster X0100
log Bayes Factor = 730.252
contains 26 variants
0.4935
Cluster X0057
log Bayes Factor = 439.35
contains 16 variants
0.4932
Cluster X0059
log Bayes Factor = 922.497
contains 26 variants
0.4916
Cluster X0210
log Bayes Factor = 426.159
contains 17 variants
0.4912
Cluster X0139
log Bayes Factor = 304.555
contains 10 variants
0.4910
Cluster X0201
log Bayes Factor = 368.049
contains 13 variants
0.4883
Cluster X0218
log Bayes Factor = 425.579
contains 18 variants
0.4871
Cluster X0197
log Bayes Factor = 158.582
contains 8 variants
0.4864
Cluster X0246
log Bayes Factor = 121.08
contains 5 variants
0.4864
Cluster X0087
log Bayes Factor = 894.58
contains 26 variants
0.4857
Cluster X0275
log Bayes Factor = 219.726
contains 10 variants
0.4852
Cluster X0283
log Bayes Factor = 162.98
contains 9 variants
0.4838
Cluster X0047
log Bayes Factor = 378.621
contains 14 variants
0.4838
Cluster X0095
log Bayes Factor = 179.348
contains 8 variants
0.4827
Cluster X0123
log Bayes Factor = 382.779
contains 14 variants
0.4820
Cluster X0188
log Bayes Factor = 222.629
contains 14 variants
0.4809
Cluster X0044
log Bayes Factor = 1165.44
contains 34 variants
0.4806
Cluster X0263
log Bayes Factor = 240.36
contains 13 variants
0.4804
Cluster X0032
log Bayes Factor = 255.737
contains 12 variants
0.4802
Cluster X0080
log Bayes Factor = 455.123
contains 21 variants
0.4795
Cluster X0213
log Bayes Factor = 405.918
contains 15 variants
0.4791
Cluster X0315
log Bayes Factor = 42.686
contains 2 variants
0.4787
Cluster X0026
log Bayes Factor = 232.119
contains 9 variants
0.4784
Cluster X0114
log Bayes Factor = 510.917
contains 25 variants
0.4739
Cluster X0182
log Bayes Factor = 91.4459
contains 4 variants
0.4727
Cluster X0042
log Bayes Factor = 307.243
contains 12 variants
0.4719
Cluster X0094
log Bayes Factor = 562.956
contains 18 variants
0.4710
Cluster X0054
log Bayes Factor = 197.338
contains 9 variants
0.4686
Cluster X0070
log Bayes Factor = 421.182
contains 15 variants
0.4683
Cluster X0264
log Bayes Factor = 205.833
contains 10 variants
0.4671
Cluster X0232
log Bayes Factor = 695.273
contains 23 variants
0.4657
Cluster X0124
log Bayes Factor = 336.468
contains 13 variants
0.4648
Cluster X0249
log Bayes Factor = 244.457
contains 11 variants
0.4646
Cluster X0075
log Bayes Factor = 431.344
contains 16 variants
0.4642
Cluster X0122
log Bayes Factor = 219.114
contains 9 variants
0.4641
Cluster X0018
log Bayes Factor = 430.611
contains 18 variants
0.4640
Cluster X0227
log Bayes Factor = 249.287
contains 11 variants
0.4636
Cluster X0141
log Bayes Factor = 742.063
contains 30 variants
0.4630
Cluster X0277
log Bayes Factor = 726.213
contains 23 variants
0.4621
Cluster X0030
log Bayes Factor = 216.364
contains 9 variants
0.4621
Cluster X0125
log Bayes Factor = 215.738
contains 7 variants
0.4619
Cluster X0117
log Bayes Factor = 453.246
contains 21 variants
0.4615
Cluster X0039
log Bayes Factor = 463.231
contains 17 variants
0.4548
Cluster X0133
log Bayes Factor = 224.204
contains 11 variants
0.4545
Cluster X0248
log Bayes Factor = 254.854
contains 10 variants
0.4544
Cluster X0297
log Bayes Factor = 63.8292
contains 4 variants
0.4544
Cluster X0077
log Bayes Factor = 571.533
contains 17 variants
0.4540
Cluster X0121
log Bayes Factor = 131.08
contains 9 variants
0.4538
Cluster X0040
log Bayes Factor = 542.747
contains 16 variants
0.4522
Cluster X0127
log Bayes Factor = 276.004
contains 14 variants
0.4511
Cluster X0192
log Bayes Factor = 402.511
contains 14 variants
0.4488
Cluster X0029
log Bayes Factor = 709.102
contains 23 variants
0.4469
Cluster X0126
log Bayes Factor = 384.432
contains 15 variants
0.4466
Cluster X0061
log Bayes Factor = 293.105
contains 15 variants
0.4466
Cluster X0148
log Bayes Factor = 315.237
contains 11 variants
0.4461
Cluster X0164
log Bayes Factor = 463.793
contains 16 variants
0.4444
Cluster X0166
log Bayes Factor = 230.746
contains 8 variants
0.4437
Cluster X0001
log Bayes Factor = 167.541
contains 7 variants
0.4430
Cluster X0258
log Bayes Factor = 104.851
contains 6 variants
0.4424
Cluster X0224
log Bayes Factor = 278.692
contains 11 variants
0.4418
Cluster X0147
log Bayes Factor = 133.509
contains 9 variants
0.4417
Cluster X0332
log Bayes Factor = 65.2374
contains 3 variants
0.4397
Cluster X0243
log Bayes Factor = 104.974
contains 6 variants
0.4393
Cluster X0049
log Bayes Factor = 597.061
contains 18 variants
0.4371
Cluster X0020
log Bayes Factor = 557.721
contains 18 variants
0.4352
Cluster X0091
log Bayes Factor = 303.64
contains 12 variants
0.4349
Cluster X0205
log Bayes Factor = 674.183
contains 18 variants
0.4338
Cluster X0033
log Bayes Factor = 379.444
contains 13 variants
0.4338
Cluster X0089
log Bayes Factor = 308.747
contains 13 variants
0.4324
Cluster X0074
log Bayes Factor = 353.38
contains 15 variants
0.4320
Cluster X0138
log Bayes Factor = 43.7891
contains 4 variants
0.4316
Cluster X0005
log Bayes Factor = 282.915
contains 11 variants
0.4293
Cluster X0145
log Bayes Factor = 274.587
contains 11 variants
0.4274
Cluster X0071
log Bayes Factor = 131.269
contains 6 variants
0.4267
Cluster X0055
log Bayes Factor = 274.911
contains 10 variants
0.4262
Cluster X0129
log Bayes Factor = 195.809
contains 7 variants
0.4258
Cluster X0081
log Bayes Factor = 278.568
contains 10 variants
0.4255
Cluster X0110
log Bayes Factor = 721.325
contains 13 variants
0.4250
Cluster X0085
log Bayes Factor = 138.902
contains 6 variants
0.4235
Cluster X0063
log Bayes Factor = 107.557
contains 5 variants
0.4218
Cluster X0180
log Bayes Factor = 410.88
contains 15 variants
0.4216
Cluster X0079
log Bayes Factor = 413.803
contains 22 variants
0.4213
Cluster X0019
log Bayes Factor = 372.36
contains 16 variants
0.4202
Cluster X0209
log Bayes Factor = 214.798
contains 8 variants
0.4202
Cluster X0278
log Bayes Factor = 173.437
contains 11 variants
0.4195
Cluster X0253
log Bayes Factor = 331.491
contains 13 variants
0.4176
Cluster X0223
log Bayes Factor = 122.347
contains 7 variants
0.4168
Cluster X0214
log Bayes Factor = 186.582
contains 8 variants
0.4166
Cluster X0231
log Bayes Factor = 82.3185
contains 5 variants
0.4158
Cluster X0088
log Bayes Factor = 243.609
contains 9 variants
0.4157
Cluster X0222
log Bayes Factor = 431.582
contains 17 variants
0.4150
Cluster X0257
log Bayes Factor = 281.184
contains 10 variants
0.4141
Cluster X0203
log Bayes Factor = 363.522
contains 11 variants
0.4135
Cluster X0250
log Bayes Factor = 43.399
contains 4 variants
0.4131
Cluster X0152
log Bayes Factor = 331.156
contains 10 variants
0.4119
Cluster X0064
log Bayes Factor = 166.06
contains 10 variants
0.4110
Cluster X0293
log Bayes Factor = 169.051
contains 7 variants
0.4106
Cluster X0212
log Bayes Factor = 300.777
contains 10 variants
0.4106
Cluster X0267
log Bayes Factor = 92.4806
contains 5 variants
0.4104
Cluster X0082
log Bayes Factor = 496.905
contains 17 variants
0.4091
Cluster X0276
log Bayes Factor = 187.108
contains 9 variants
0.4087
Cluster X0083
log Bayes Factor = 351.917
contains 13 variants
0.4083
Cluster X0229
log Bayes Factor = 347.165
contains 13 variants
0.4074
Cluster X0084
log Bayes Factor = 433.078
contains 21 variants
0.4074
Cluster X0320
log Bayes Factor = 110.964
contains 6 variants
0.4056
Cluster X0103
log Bayes Factor = 194.456
contains 13 variants
0.4051
Cluster X0174
log Bayes Factor = 214.209
contains 8 variants
0.4049
Cluster X0259
log Bayes Factor = 246.237
contains 11 variants
0.4048
Cluster X0140
log Bayes Factor = 164.536
contains 8 variants
0.4047
Cluster X0050
log Bayes Factor = 397.79
contains 16 variants
0.4047
Cluster X0093
log Bayes Factor = 289.878
contains 10 variants
0.4037
Cluster X0290
log Bayes Factor = 333.908
contains 13 variants
0.4027
Cluster X0244
log Bayes Factor = 122.647
contains 5 variants
0.4018
Cluster X0157
log Bayes Factor = 172.957
contains 8 variants
0.4016
Cluster X0098
log Bayes Factor = 246.226
contains 8 variants
0.4015
Cluster X0132
log Bayes Factor = 267.393
contains 11 variants
0.4015
Cluster X0015
log Bayes Factor = 356.23
contains 15 variants
0.4014
Cluster X0062
log Bayes Factor = 68.7461
contains 4 variants
0.3998
Cluster X0273
log Bayes Factor = 109.896
contains 6 variants
0.3997
Cluster X0067
log Bayes Factor = 179.381
contains 8 variants
0.3996
Cluster X0007
log Bayes Factor = 107.567
contains 7 variants
0.3992
Cluster X0162
log Bayes Factor = 144.479
contains 9 variants
0.3991
Cluster X0041
log Bayes Factor = 306.192
contains 14 variants
0.3985
Cluster X0142
log Bayes Factor = 295.63
contains 12 variants
0.3984
Cluster X0024
log Bayes Factor = 309.44
contains 13 variants
0.3969
Cluster X0196
log Bayes Factor = 301.726
contains 18 variants
0.3966
Cluster X0191
log Bayes Factor = 163.555
contains 8 variants
0.3955
Cluster X0119
log Bayes Factor = 114.358
contains 6 variants
0.3942
Cluster X0120
log Bayes Factor = 79.6695
contains 4 variants
0.3940
Cluster X0137
log Bayes Factor = 120.748
contains 4 variants
0.3919
Cluster X0177
log Bayes Factor = 254.872
contains 10 variants
0.3913
Cluster X0271
log Bayes Factor = 256.743
contains 10 variants
0.3907
Cluster X0230
log Bayes Factor = 131.696
contains 7 variants
0.3903
Cluster X0165
log Bayes Factor = 303.727
contains 12 variants
0.3902
Cluster X0134
log Bayes Factor = 151.731
contains 8 variants
0.3899
Cluster X0060
log Bayes Factor = 242.413
contains 5 variants
0.3891
Cluster X0176
log Bayes Factor = 407.797
contains 14 variants
0.3875
Cluster X0159
log Bayes Factor = 152.327
contains 7 variants
0.3865
Cluster X0173
log Bayes Factor = 654.164
contains 9 variants
0.3862
Cluster X0284
log Bayes Factor = 192.532
contains 9 variants
0.3845
Cluster X0236
log Bayes Factor = 83.9265
contains 3 variants
0.3837
Cluster X0170
log Bayes Factor = 264.081
contains 11 variants
0.3835
Cluster X0184
log Bayes Factor = 188.416
contains 8 variants
0.3811
Cluster X0269
log Bayes Factor = 155.455
contains 9 variants
0.3809
Cluster X0065
log Bayes Factor = 53.0717
contains 3 variants
0.3803
Cluster X0002
log Bayes Factor = 522.044
contains 22 variants
0.3797
Cluster X0153
log Bayes Factor = 328.394
contains 11 variants
0.3794
Cluster X0256
log Bayes Factor = 211.588
contains 9 variants
0.3785
Cluster X0167
log Bayes Factor = 136.48
contains 6 variants
0.3774
Cluster X0225
log Bayes Factor = 36.4143
contains 3 variants
0.3772
Cluster X0237
log Bayes Factor = 123.902
contains 6 variants
0.3769
Cluster X0189
log Bayes Factor = 149.681
contains 5 variants
0.3765
Cluster X0161
log Bayes Factor = 609.219
contains 20 variants
0.3762
Cluster X0220
log Bayes Factor = 142.284
contains 7 variants
0.3757
Cluster X0221
log Bayes Factor = 149.378
contains 10 variants
0.3755
Cluster X0076
log Bayes Factor = 310.928
contains 15 variants
0.3750
Cluster X0086
log Bayes Factor = 131.002
contains 8 variants
0.3732
Cluster X0195
log Bayes Factor = 167.337
contains 13 variants
0.3730
Cluster X0045
log Bayes Factor = 446.264
contains 16 variants
0.3729
Cluster X0014
log Bayes Factor = 131.677
contains 6 variants
0.3728
Cluster X0143
log Bayes Factor = 179.808
contains 8 variants
0.3726
Cluster X0245
log Bayes Factor = 256.009
contains 7 variants
0.3723
Cluster X0181
log Bayes Factor = 141.396
contains 6 variants
0.3717
Cluster X0109
log Bayes Factor = 257.685
contains 11 variants
0.3708
Cluster X0247
log Bayes Factor = 98.6507
contains 6 variants
0.3707
Cluster X0037
log Bayes Factor = 171.712
contains 6 variants
0.3704
Cluster X0261
log Bayes Factor = 420.614
contains 20 variants
0.3692
Cluster X0178
log Bayes Factor = 225.6
contains 9 variants
0.3676
Cluster X0012
log Bayes Factor = 112.432
contains 5 variants
0.3675
Cluster X0058
log Bayes Factor = 183.199
contains 8 variants
0.3669
Cluster X0156
log Bayes Factor = 226.954
contains 9 variants
0.3665
Cluster X0268
log Bayes Factor = 213.591
contains 8 variants
0.3664
Cluster X0160
log Bayes Factor = 99.5328
contains 9 variants
0.3664
Cluster X0118
log Bayes Factor = 91.1908
contains 5 variants
0.3651
Cluster X0131
log Bayes Factor = 143.942
contains 8 variants
0.3648
Cluster X0155
log Bayes Factor = 348.568
contains 12 variants
0.3644
Cluster X0326
log Bayes Factor = 112.92
contains 5 variants
0.3602
Cluster X0208
log Bayes Factor = 40.6733
contains 2 variants
0.3537
Cluster X0270
log Bayes Factor = 41.2082
contains 4 variants
0.3534
Cluster X0234
log Bayes Factor = 28.8983
contains 2 variants
0.3476
Cluster X0128
log Bayes Factor = 148.918
contains 15 variants
0.3432
Cluster X0240
log Bayes Factor = 104.862
contains 6 variants
0.3424
Cluster X0003
log Bayes Factor = 195.6
contains 8 variants
0.3419
Cluster X0327
log Bayes Factor = 118.248
contains 3 variants
0.3374
Cluster X0046
log Bayes Factor = 387.972
contains 16 variants
0.3367
Cluster X0048
log Bayes Factor = 358.819
contains 19 variants
0.3353
Cluster X0204
log Bayes Factor = 169.796
contains 8 variants
0.3320
Cluster X0113
log Bayes Factor = 49.7598
contains 3 variants
0.3320
Cluster X0238
log Bayes Factor = 97.9307
contains 4 variants
0.3275
Cluster X0163
log Bayes Factor = 122.554
contains 6 variants
0.3244
Cluster X0185
log Bayes Factor = 84.7127
contains 6 variants
0.3238
Cluster X0328
log Bayes Factor = 380.087
contains 8 variants
0.3233
Cluster X0038
log Bayes Factor = 31.1234
contains 2 variants
0.3158
Cluster X0194
log Bayes Factor = 189.9
contains 5 variants
0.3145
Cluster X0300
log Bayes Factor = 109.684
contains 3 variants
0.3070
Cluster X0102
log Bayes Factor = 99.5678
contains 5 variants
0.3032
Cluster X0287
log Bayes Factor = 33.3095
contains 4 variants
0.3024
Cluster X0107
log Bayes Factor = 151.016
contains 1 variants
0.3012
Cluster X0078
log Bayes Factor = 203.49
contains 11 variants
0.2987
Cluster X0004
log Bayes Factor = 32.8452
contains 2 variants
0.2970
Cluster X0301
log Bayes Factor = 297.489
contains 2 variants
0.2913
Cluster X0199
log Bayes Factor = 350.038
contains 3 variants
0.2719
Cluster X0337
log Bayes Factor = 84.9395
contains 2 variants
0.2534
Cluster X0172
log Bayes Factor = 80.2701
contains 3 variants
0.2368
Cluster X0179
log Bayes Factor = 426.274
contains 17 variants
0.2305
Cluster X0279
log Bayes Factor = 52.8832
contains 2 variants
0.2244
Cluster X0324
log Bayes Factor = 32.1341
contains 1 variants
0.2102
Cluster X0206
log Bayes Factor = 56.4479
contains 3 variants
0.1572
Cluster X0136
log Bayes Factor = 105.47
contains 5 variants
0.1004
Cluster X0330
log Bayes Factor = 183.455
contains 2 variants
0.0554
 
 

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

This website was created, designed, and edited by ORCID iD iconPatrick K. Albers

The contents of TreeWAS.org are available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) with attribution (citation) required.

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