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Variant clusters
Hospitalization Episode Statistics (HES)
Genetic variants: 36,212
Diagnostic terms: × 19,155
Association results: = 693,640,860
Self-Reported Statistics (SRS)
Genetic variants: 28,458
Diagnostic terms: × 474
Association results: = 13,489,092
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Diagnostic term associations

Hospitalization Episode Statistics (HES)

C22.0
Liver cell carcinoma
Parent term
C22 Malignant neoplasm of liver and intrahepatic bile ducts
What are diagnostic terms?
Variant effects

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Genome-wide   Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Results table
Variant Risk
posterior probability
 No effect
posterior probability
 Protective
posterior probability
  
rs61901649 lBF = 7.32545   Chr11 : 59,340,013
0.943 0.057 0.000
rs72742683 lBF = 12.2212   Chr1 : 197,554,943
0.913 0.087 0.000
rs915895 lBF = 208.157   Chr6 : 32,190,217
0.908 0.092 0.000
rs80215559 lBF = 40.8472   Chr6 : 25,918,225
0.896 0.104 0.000
rs915894 lBF = 219.818   Chr6 : 32,190,390
0.893 0.107 0.000
rs443198 lBF = 204.432   Chr6 : 32,190,406
0.883 0.117 0.000
Affx-28486470 lBF = 253.054   Chr6 : 32,546,879
0.876 0.124 0.000
rs10401969 lBF = 22.1773   Chr19 : 19,407,718
0.875 0.125 0.000
rs76188673 lBF = 12.8925   Chr8 : 2,443,492
0.872 0.128 0.000
rs111834747 lBF = 248.946   Chr6 : 32,492,866
0.871 0.129 0.000
rs204993 lBF = 249.805   Chr6 : 32,155,581
0.870 0.130 0.000
rs9268853 lBF = 248.885   Chr6 : 32,429,643
0.867 0.133 0.000
rs6888802 lBF = 8.70648   Chr5 : 177,964,789
0.865 0.135 0.000
rs3208409 lBF = 252.426   Chr6 : 32,546,696
0.864 0.136 0.000
rs477515 lBF = 222.226   Chr6 : 32,569,691
0.861 0.139 0.000
rs28366302 lBF = 252.399   Chr6 : 32,560,934
0.860 0.140 0.000
rs9268923 lBF = 248.283   Chr6 : 32,432,835
0.859 0.141 0.000
rs28724008 lBF = 253.172   Chr6 : 32,550,550
0.858 0.142 0.000
rs13192471 lBF = 84.1735   Chr6 : 32,671,103
0.000 0.143 0.857
rs34839759 lBF = 247.024   Chr6 : 32,546,557
0.848 0.152 0.000
rs1408272 lBF = 43.5505   Chr6 : 25,842,951
0.843 0.157 0.000
rs9268969 lBF = 249.147   Chr6 : 32,434,349
0.838 0.162 0.000
rs9268905 lBF = 248.25   Chr6 : 32,432,077
0.831 0.169 0.000
rs1800562 lBF = 34.2038   Chr6 : 26,093,141
0.829 0.171 0.000
rs9276826 lBF = 16.7625   Chr6 : 32,830,568
0.000 0.177 0.823
rs76308827 lBF = 22.5688   Chr8 : 80,264,727
0.821 0.179 0.000
rs9273349 lBF = 389.4   Chr6 : 32,625,869
0.812 0.188 0.000
rs11760220 lBF = 20.43   Chr7 : 149,257,763
0.807 0.193 0.000
rs111936470 lBF = 16.3472   Chr10 : 80,120,669
0.805 0.195 0.000
rs2395185 lBF = 246.003   Chr6 : 32,433,167
0.791 0.209 0.000
rs204995 lBF = 73.8651   Chr6 : 32,154,285
0.790 0.210 0.000
rs111461772 lBF = 26.9073   Chr6 : 33,373,953
0.788 0.212 0.000
rs79268501 lBF = 16.8497   Chr18 : 55,979,238
0.787 0.213 0.000
rs1071265 lBF = 7.85233   Chr9 : 33,736,196
0.785 0.215 0.000
rs77048935 lBF = 15.1563   Chr9 : 114,316,981
0.778 0.222 0.000
rs12214723 lBF = 2.41708   Chr6 : 41,993,688
0.000 0.226 0.774
rs3132581 lBF = 121.962   Chr6 : 30,913,458
0.773 0.227 0.000
rs1264361 lBF = 132.901   Chr6 : 30,777,498
0.772 0.228 0.000
rs204999 lBF = 225.279   Chr6 : 32,109,979
0.769 0.231 0.000
rs35917620 lBF = 15.5394   Chr11 : 128,051,163
0.769 0.231 0.000
rs886425 lBF = 133.047   Chr6 : 30,781,301
0.767 0.233 0.000
rs17013679 lBF = 8.97199   Chr1 : 209,084,801
0.767 0.233 0.000
rs130076 lBF = 306.003   Chr6 : 31,122,482
0.762 0.238 0.000
rs1264353 lBF = 133.578   Chr6 : 30,787,762
0.762 0.238 0.000
rs11721654 lBF = 9.8561   Chr4 : 41,203,091
0.761 0.239 0.000
rs117540688 lBF = 12.0488   Chr9 : 6,064,428
0.761 0.239 0.000
rs746630 lBF = 8.16661   Chr14 : 83,255,205
0.759 0.241 0.000
rs12356580 lBF = 5.41793   Chr10 : 102,849,455
0.756 0.244 0.000
rs79913058 lBF = 6.03764   Chr10 : 73,019,552
0.756 0.244 0.000
rs2233956 lBF = 315.31   Chr6 : 31,081,205
0.754 0.246 0.000
rs112225386 lBF = 14.6649   Chr2 : 99,563,294
0.751 0.249 0.000
rs116940284 lBF = 11.3342   Chr11 : 63,333,643
0.750 0.250 0.000
rs58542926 lBF = 25.9472   Chr19 : 19,379,549
0.750 0.250 0.000
rs6679342 lBF = 13.0009   Chr1 : 81,656,935
0.749 0.251 0.000
rs75015210 lBF = 12.5833   Chr5 : 26,377,810
0.749 0.251 0.000
rs77322120 lBF = 13.2546   Chr9 : 101,171,443
0.749 0.251 0.000
rs76865013 lBF = 11.792   Chr10 : 72,886,147
0.748 0.252 0.000
rs117251056 lBF = 29.3181   Chr11 : 129,056,639
0.746 0.254 0.000
rs72819829 lBF = 13.4058   Chr5 : 180,227,332
0.743 0.257 0.000
rs118096183 lBF = 6.77798   Chr9 : 5,772,424
0.742 0.258 0.000
rs57484362 lBF = 14.3244   Chr2 : 43,866,411
0.742 0.258 0.000
rs73172251 lBF = 13.5215   Chr13 : 42,956,384
0.737 0.262 0.000
Affx-37072023 lBF = 455.451   Chr6 : 32,612,430
0.000 0.265 0.735
rs72883103 lBF = 10.4164   Chr17 : 74,629,898
0.735 0.265 0.000
rs3094086 lBF = 121.587   Chr6 : 30,919,391
0.731 0.269 0.000
rs73644982 lBF = 13.9807   Chr9 : 32,523,117
0.730 0.270 0.000
rs115939538 lBF = 12.0345   Chr3 : 65,724,409
0.730 0.270 0.000
rs72820359 lBF = 9.17012   Chr17 : 1,523,967
0.727 0.273 0.000
rs886424 lBF = 133.92   Chr6 : 30,782,002
0.727 0.273 0.000
rs117179684 lBF = 20.1477   Chr7 : 12,297,710
0.725 0.275 0.000
rs114619588 lBF = 11.9743   Chr4 : 55,738,261
0.724 0.276 0.000
rs715299 lBF = 48.7211   Chr6 : 32,189,841
0.724 0.276 0.000
rs114202713 lBF = 10.9168   Chr2 : 50,748,990
0.722 0.278 0.000
rs41268932 lBF = 84.7067   Chr6 : 32,154,711
0.719 0.281 0.000
rs117802803 lBF = 21.4181   Chr12 : 22,796,804
0.719 0.281 0.000
rs74589926 lBF = 12.1504   Chr2 : 43,903,262
0.719 0.281 0.000
Affx-28496566 lBF = 410.258   Chr6 : 32,625,869
0.000 0.281 0.719
rs176095 lBF = 360.117   Chr6 : 32,158,319
0.718 0.282 0.000
rs1150765 lBF = 304.593   Chr6 : 31,127,562
0.718 0.282 0.000
rs3130673 lBF = 124.517   Chr6 : 30,746,519
0.718 0.282 0.000
rs61319746 lBF = 16.9132   Chr5 : 43,845,213
0.717 0.283 0.000
rs75489010 lBF = 27.7624   Chr12 : 115,986,702
0.716 0.283 0.000
rs113373865 lBF = 13.4513   Chr8 : 67,091,991
0.716 0.284 0.000
rs11021370 lBF = 5.86896   Chr11 : 95,726,855
0.713 0.287 0.000
rs78801169 lBF = 14.2444   Chr2 : 167,872,932
0.712 0.288 0.000
rs111720385 lBF = 5.32077   Chr18 : 43,373,121
0.711 0.289 0.000
rs28780107 lBF = 43.9224   Chr6 : 30,454,949
0.709 0.291 0.000
rs3095336 lBF = 320.745   Chr6 : 30,738,446
0.707 0.293 0.000
rs16991615 lBF = 13.5331   Chr20 : 5,948,227
0.707 0.293 0.000
rs3130455 lBF = 310.319   Chr6 : 31,125,978
0.706 0.294 0.000
rs62354080 lBF = 15.2122   Chr4 : 188,370,696
0.705 0.295 0.000
rs112330669 lBF = 9.08939   Chr18 : 53,568,670
0.705 0.295 0.000
rs6624 lBF = 6.43307   Chr16 : 75,327,916
0.704 0.296 0.000
rs76547981 lBF = 10.2504   Chr1 : 81,547,822
0.703 0.297 0.000
rs204992 lBF = 357.269   Chr6 : 32,156,908
0.703 0.297 0.000
rs72991078 lBF = 15.803   Chr2 : 238,732,864
0.701 0.299 0.000
rs78714450 lBF = 5.15716   Chr15 : 86,788,684
0.701 0.299 0.000
rs2854047 lBF = 77.4353   Chr6 : 32,179,432
0.699 0.301 0.000
rs75006910 lBF = 6.06699   Chr8 : 124,535,085
0.699 0.301 0.000
rs114262607 lBF = 31.3906   Chr1 : 102,915,381
0.698 0.302 0.000
rs11784849 lBF = 14.957   Chr8 : 75,144,736
0.697 0.303 0.000
rs72960692 lBF = 13.056   Chr1 : 43,467,276
0.695 0.305 0.000
rs77960360 lBF = 18.2632   Chr10 : 17,147,270
0.695 0.305 0.000
rs1264308 lBF = 139.062   Chr6 : 30,879,987
0.694 0.306 0.000
rs143813799 lBF = 18.0084   Chr17 : 60,023,795
0.694 0.306 0.000
rs77675795 lBF = 9.95372   Chr6 : 52,125,471
0.694 0.306 0.000
rs76614693 lBF = 15.2282   Chr2 : 167,813,566
0.693 0.307 0.000
rs17250031 lBF = 17.4462   Chr8 : 75,077,959
0.690 0.310 0.000
rs17843606 lBF = 435.465   Chr6 : 32,620,399
0.000 0.310 0.690
rs13431384 lBF = 5.55384   Chr2 : 127,310,661
0.690 0.310 0.000
rs117675380 lBF = 13.6306   Chr18 : 811,672
0.687 0.313 0.000
rs115706318 lBF = 11.1749   Chr2 : 97,143,761
0.687 0.313 0.000
rs1264341 lBF = 143.565   Chr6 : 30,802,465
0.686 0.314 0.000
rs3769823 lBF = 35.8804   Chr2 : 202,122,995
0.684 0.315 0.000
rs7140889 lBF = 14.9122   Chr14 : 31,153,199
0.683 0.317 0.000
rs2535332 lBF = 137.95   Chr6 : 30,813,249
0.683 0.317 0.000
rs112424909 lBF = 17.4922   Chr18 : 9,705,858
0.682 0.318 0.000
rs2535340 lBF = 143.495   Chr6 : 30,838,497
0.681 0.319 0.000
rs3130641 lBF = 125.57   Chr6 : 30,764,081
0.680 0.319 0.000
rs71562646 lBF = 9.54905   Chr7 : 104,827,587
0.680 0.320 0.000
rs886420 lBF = 143.699   Chr6 : 30,879,636
0.680 0.320 0.000
rs74747509 lBF = 13.8375   Chr2 : 167,581,121
0.680 0.320 0.000
rs34835292 lBF = 6.28298   Chr21 : 17,333,558
0.678 0.322 0.000
rs116609675 lBF = 13.7421   Chr2 : 21,479,113
0.678 0.322 0.000
rs16902048 lBF = 13.4263   Chr8 : 128,243,131
0.677 0.323 0.000
rs886422 lBF = 142.867   Chr6 : 30,864,279
0.677 0.323 0.000
rs10272474 lBF = 13.1578   Chr7 : 96,155,852
0.677 0.323 0.000
rs10108669 lBF = 24.3176   Chr8 : 108,685,885
0.676 0.323 0.000
rs1417290 lBF = 17.5513   Chr9 : 7,046,917
0.676 0.323 0.000
rs79962977 lBF = 17.5516   Chr3 : 177,306,170
0.676 0.323 0.000
rs61885683 lBF = 7.29609   Chr11 : 29,914,282
0.675 0.324 0.000
rs114639805 lBF = 17.9862   Chr5 : 152,612,967
0.675 0.325 0.000
rs11706566 lBF = 11.9547   Chr3 : 132,292,939
0.675 0.325 0.000
rs1264322 lBF = 144.226   Chr6 : 30,857,894
0.675 0.325 0.000
rs113402958 lBF = 6.87052   Chr14 : 94,400,394
0.674 0.326 0.000
rs62495153 lBF = 7.67204   Chr8 : 8,136,656
0.674 0.326 0.000
rs111797345 lBF = 22.7323   Chr3 : 69,168,628
0.673 0.327 0.000
rs28732193 lBF = 69.6869   Chr6 : 32,306,922
0.673 0.327 0.000
rs78222176 lBF = 16.052   Chr14 : 100,115,473
0.673 0.327 0.000
rs117646115 lBF = 8.28317   Chr10 : 10,918,923
0.673 0.327 0.000
rs80076601 lBF = 13.5975   Chr20 : 24,148,686
0.672 0.328 0.000
rs78417298 lBF = 19.5275   Chr3 : 52,723,309
0.672 0.328 0.000
rs2299031 lBF = 13.2378   Chr6 : 28,196,718
0.672 0.328 0.000
rs77855512 lBF = 16.0644   Chr17 : 12,141,091
0.671 0.329 0.000
rs117504245 lBF = 13.128   Chr18 : 32,214,484
0.669 0.331 0.000
rs62556547 lBF = 41.6654   Chr9 : 22,019,156
0.669 0.331 0.000
rs2128770 lBF = 5.52515   Chr2 : 67,453,754
0.669 0.331 0.000
rs74862371 lBF = 16.8875   Chr9 : 7,028,832
0.668 0.332 0.000
rs1261741 lBF = 8.31313   Chr14 : 83,222,515
0.667 0.333 0.000
rs17776284 lBF = 12.0857   Chr6 : 28,196,454
0.667 0.333 0.000
rs3917438 lBF = 9.0791   Chr1 : 169,693,850
0.666 0.334 0.000
rs185190675 lBF = 18.6759   Chr5 : 26,493,545
0.665 0.335 0.000
rs12770994 lBF = 5.42363   Chr10 : 60,432,645
0.665 0.335 0.000
rs11572671 lBF = 15.0523   Chr1 : 216,893,238
0.664 0.336 0.000
rs204994 lBF = 75.1027   Chr6 : 32,154,998
0.664 0.336 0.000
rs1494715 lBF = 9.01355   Chr5 : 26,424,083
0.663 0.337 0.000
rs34120730 lBF = 12.3059   Chr8 : 75,405,303
0.663 0.337 0.000
rs1704996 lBF = 30.724   Chr6 : 33,182,895
0.663 0.337 0.000
rs7766599 lBF = 23.5091   Chr6 : 28,703,432
0.662 0.338 0.000
rs75435968 lBF = 11.9878   Chr7 : 137,152,383
0.662 0.338 0.000
rs10514718 lBF = 1.82647   Chr3 : 61,413,814
0.661 0.338 0.000
rs969088 lBF = 5.66242   Chr5 : 26,389,262
0.661 0.339 0.000
rs3131044 lBF = 124.19   Chr6 : 30,758,664
0.661 0.339 0.000
rs114897391 lBF = 14.311   Chr15 : 96,065,019
0.660 0.340 0.000
rs80008789 lBF = 15.187   Chr10 : 17,042,603
0.660 0.340 0.000
rs61943445 lBF = 13.7019   Chr12 : 118,861,521
0.659 0.341 0.000
rs4949465 lBF = 13.4685   Chr1 : 32,178,489
0.659 0.341 0.000
rs116971837 lBF = 14.357   Chr17 : 8,680,917
0.658 0.342 0.000
rs115457615 lBF = 15.9194   Chr2 : 168,583,240
0.657 0.342 0.000
rs12682344 lBF = 16.2953   Chr8 : 128,106,784
0.656 0.344 0.000
rs72849247 lBF = 90.4818   Chr6 : 32,453,194
0.000 0.345 0.655
rs7830341 lBF = 16.3042   Chr8 : 128,109,930
0.655 0.345 0.000
rs112673116 lBF = 15.2275   Chr2 : 171,242,804
0.655 0.345 0.000
rs79903896 lBF = 14.376   Chr14 : 31,222,143
0.653 0.347 0.000
rs11163302 lBF = 8.17131   Chr1 : 81,943,906
0.653 0.347 0.000
rs7386241 lBF = 16.8881   Chr8 : 139,240,856
0.653 0.347 0.000
rs891974 lBF = 8.87285   Chr5 : 170,902,780
0.653 0.347 0.000
rs9273339 lBF = 437.281   Chr6 : 32,623,430
0.000 0.347 0.653
rs3131060 lBF = 125.129   Chr6 : 30,763,291
0.652 0.348 0.000
rs6983561 lBF = 16.9301   Chr8 : 128,106,880
0.652 0.348 0.000
rs3131050 lBF = 124.919   Chr6 : 30,760,025
0.652 0.348 0.000
rs192051543 lBF = 14.1247   Chr12 : 22,657,770
0.651 0.349 0.000
rs117297586 lBF = 6.19757   Chr8 : 50,205,976
0.650 0.350 0.000
rs77865213 lBF = 21.1258   Chr1 : 67,198,843
0.649 0.351 0.000
rs6844473 lBF = 16.0482   Chr4 : 147,368,219
0.649 0.351 0.000
rs34670849 lBF = 12.9285   Chr1 : 159,160,805
0.649 0.351 0.000
rs17612576 lBF = 440.731   Chr6 : 32,615,458
0.000 0.352 0.648
rs9273215 lBF = 440.214   Chr6 : 32,613,712
0.000 0.352 0.648
rs3131921 lBF = 120.914   Chr6 : 30,907,335
0.647 0.353 0.000
rs9273088 lBF = 442.306   Chr6 : 32,612,488
0.000 0.353 0.647
rs117091075 lBF = 6.45647   Chr13 : 83,643,550
0.646 0.354 0.000
rs72681282 lBF = 17.294   Chr1 : 103,221,787
0.645 0.354 0.000
rs111697632 lBF = 12.245   Chr7 : 101,274,811
0.645 0.355 0.000
rs28359524 lBF = 12.4863   Chr8 : 18,076,854
0.645 0.355 0.000
rs16967767 lBF = 16.5612   Chr13 : 106,606,772
0.645 0.355 0.000
rs1063355 lBF = 441.898   Chr6 : 32,627,714
0.000 0.356 0.644
rs9272346 lBF = 453.316   Chr6 : 32,604,372
0.644 0.356 0.000
rs75592780 lBF = 7.58134   Chr15 : 71,952,163
0.644 0.356 0.000
rs13251303 lBF = 21.0972   Chr8 : 34,230,938
0.644 0.356 0.000
rs116080128 lBF = 12.1963   Chr4 : 31,457,995
0.643 0.357 0.000
rs75593565 lBF = 13.6234   Chr12 : 32,115,266
0.643 0.357 0.000
rs74678038 lBF = 16.2265   Chr5 : 132,614,044
0.642 0.358 0.000
rs6916062 lBF = 69.9973   Chr6 : 32,219,041
0.642 0.358 0.000
rs9273373 lBF = 453.011   Chr6 : 32,626,601
0.642 0.358 0.000
rs117678708 lBF = 8.2297   Chr22 : 31,486,607
0.639 0.361 0.000
rs78750032 lBF = 11.0825   Chr1 : 156,671,013
0.638 0.362 0.000
rs12139703 lBF = 12.288   Chr1 : 81,472,317
0.638 0.362 0.000
rs115936056 lBF = 23.4397   Chr1 : 216,494,365
0.638 0.362 0.000
rs116431701 lBF = 16.2425   Chr7 : 151,413,973
0.638 0.362 0.000
rs56253436 lBF = 5.26182   Chr22 : 40,855,131
0.636 0.363 0.000
rs11725957 lBF = 5.87175   Chr4 : 49,062,892
0.636 0.363 0.000
rs2736157 lBF = 327.457   Chr6 : 31,600,820
0.636 0.364 0.000
rs6927022 lBF = 550.507   Chr6 : 32,612,397
0.636 0.364 0.000
rs4831269 lBF = 8.89457   Chr8 : 13,898,600
0.636 0.364 0.000
rs72788536 lBF = 19.7511   Chr2 : 21,134,209
0.635 0.365 0.000
rs12342947 lBF = 20.0509   Chr9 : 7,026,860
0.634 0.366 0.000
Affx-52325364 lBF = 12.7839   Chr11 : 36,310,897
0.633 0.366 0.000
rs114752401 lBF = 17.2608   Chr4 : 188,730,635
0.633 0.367 0.000
rs213230 lBF = 76.3996   Chr6 : 28,330,264
0.633 0.367 0.000
rs17280797 lBF = 24.1087   Chr6 : 28,697,625
0.632 0.368 0.000
rs77942316 lBF = 2.53949   Chr8 : 92,359,337
0.632 0.368 0.000
rs17406405 lBF = 16.4915   Chr7 : 78,658,711
0.631 0.369 0.000
rs2555469 lBF = 76.5082   Chr6 : 32,179,494
0.631 0.369 0.000
rs17038828 lBF = 6.28601   Chr3 : 39,475,342
0.630 0.369 0.000
rs72732436 lBF = 16.1169   Chr1 : 99,464,107
0.630 0.370 0.000
rs78284770 lBF = 17.3311   Chr9 : 91,652,587
0.630 0.370 0.000
rs12896812 lBF = 15.8059   Chr14 : 104,324,496
0.630 0.370 0.000
rs2071285 lBF = 78.0918   Chr6 : 32,180,431
0.630 0.370 0.000
rs3132580 lBF = 124.975   Chr6 : 30,920,124
0.628 0.372 0.000
rs1634726 lBF = 154.507   Chr6 : 30,985,828
0.628 0.372 0.000
rs72850953 lBF = 8.10331   Chr11 : 1,771,871
0.627 0.373 0.000
rs187700680 lBF = 24.0087   Chr8 : 15,377,498
0.626 0.373 0.000
rs172330 lBF = 26.9607   Chr6 : 28,786,884
0.626 0.373 0.000
rs35053137 lBF = 12.277   Chr16 : 81,590,859
0.626 0.373 0.000
rs78990647 lBF = 15.3465   Chr2 : 236,837,582
0.626 0.374 0.000
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0.626 0.374 0.000
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rs79600573 lBF = 9.93512   Chr14 : 80,286,922
0.556 0.444 0.000
rs116922703 lBF = 18.2926   Chr6 : 166,242,408
0.556 0.444 0.000
rs182679717 lBF = 13.1183   Chr6 : 41,975,693
0.556 0.444 0.000
rs117120696 lBF = 20.1492   Chr9 : 81,426,723
0.556 0.444 0.000
rs11557308 lBF = 22.8654   Chr6 : 31,431,403
0.556 0.444 0.000
rs523383 lBF = 87.9986   Chr6 : 25,869,848
0.555 0.445 0.000
rs12582852 lBF = 14.3759   Chr12 : 3,315,933
0.555 0.445 0.000
rs117488235 lBF = 19.2182   Chr9 : 15,707,430
0.555 0.445 0.000
rs9446777 lBF = 6.12687   Chr6 : 73,581,051
0.555 0.445 0.000
rs201918052 lBF = 21.0846   Chr16 : 30,772,988
0.555 0.445 0.000
rs6903652 lBF = 89.1572   Chr6 : 28,322,120
0.554 0.445 0.000
rs76129882 lBF = 8.85261   Chr11 : 59,406,860
0.554 0.445 0.000
rs231564 lBF = 11.8862   Chr20 : 49,254,735
0.554 0.446 0.000
rs9936351 lBF = 16.9967   Chr16 : 6,141,379
0.554 0.446 0.000
rs1800750 lBF = 31.3993   Chr6 : 31,542,963
0.554 0.446 0.000
rs118155048 lBF = 12.4591   Chr16 : 55,189,457
0.554 0.446 0.000
rs80320220 lBF = 9.08148   Chr4 : 142,973,823
0.554 0.446 0.000
rs35038461 lBF = 9.82063   Chr1 : 1,146,339
0.554 0.446 0.000
rs1062070 lBF = 160.034   Chr6 : 32,148,031
0.553 0.446 0.000
rs176461 lBF = 24.1203   Chr6 : 28,826,405
0.552 0.448 0.000
rs56227635 lBF = 17.231   Chr2 : 128,259,423
0.552 0.448 0.000
rs7024058 lBF = 17.5874   Chr9 : 1,938,082
0.552 0.448 0.000
rs1119211 lBF = 88.6883   Chr6 : 28,309,136
0.551 0.449 0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

 
Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0027
log Bayes Factor = 25.8087
contains 2 variants
0.4275
Cluster X0317
log Bayes Factor = 95.4365
contains 2 variants
0.3669
Cluster X0333
log Bayes Factor = 38.671
contains 2 variants
0.2284
Cluster X0186
log Bayes Factor = 35.9761
contains 2 variants
0.1959
Cluster X0252
log Bayes Factor = 170.729
contains 6 variants
0.1471
Cluster X0289
log Bayes Factor = 60.4564
contains 1 variants
0.1274
Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0095
log Bayes Factor = 179.348
contains 8 variants
0.9957
Cluster X0106
log Bayes Factor = 980.916
contains 30 variants
0.9939
Cluster X0146
log Bayes Factor = 686.343
contains 22 variants
0.9931
Cluster X0072
log Bayes Factor = 1189.98
contains 37 variants
0.9919
Cluster X0073
log Bayes Factor = 785.614
contains 25 variants
0.9907
Cluster X0274
log Bayes Factor = 454.783
contains 18 variants
0.9897
Cluster X0043
log Bayes Factor = 517.108
contains 20 variants
0.9874
Cluster X0044
log Bayes Factor = 1165.44
contains 34 variants
0.9864
Cluster X0087
log Bayes Factor = 894.58
contains 26 variants
0.9846
Cluster X0180
log Bayes Factor = 410.88
contains 15 variants
0.9799
Cluster X0203
log Bayes Factor = 363.522
contains 11 variants
0.9727
Cluster X0249
log Bayes Factor = 244.457
contains 11 variants
0.9645
Cluster X0089
log Bayes Factor = 308.747
contains 13 variants
0.9598
Cluster X0132
log Bayes Factor = 267.393
contains 11 variants
0.9590
Cluster X0150
log Bayes Factor = 861.091
contains 26 variants
0.9575
Cluster X0213
log Bayes Factor = 405.918
contains 15 variants
0.9546
Cluster X0033
log Bayes Factor = 379.444
contains 13 variants
0.9460
Cluster X0337
log Bayes Factor = 84.9395
contains 2 variants
0.9422
Cluster X0019
log Bayes Factor = 372.36
contains 16 variants
0.9413
Cluster X0268
log Bayes Factor = 213.591
contains 8 variants
0.9392
Cluster X0119
log Bayes Factor = 114.358
contains 6 variants
0.9386
Cluster X0140
log Bayes Factor = 164.536
contains 8 variants
0.9320
Cluster X0230
log Bayes Factor = 131.696
contains 7 variants
0.9315
Cluster X0131
log Bayes Factor = 143.942
contains 8 variants
0.9274
Cluster X0178
log Bayes Factor = 225.6
contains 9 variants
0.9274
Cluster X0148
log Bayes Factor = 315.237
contains 11 variants
0.9264
Cluster X0077
log Bayes Factor = 571.533
contains 17 variants
0.9260
Cluster X0124
log Bayes Factor = 336.468
contains 13 variants
0.9247
Cluster X0229
log Bayes Factor = 347.165
contains 13 variants
0.9146
Cluster X0169
log Bayes Factor = 331.98
contains 16 variants
0.9126
Cluster X0259
log Bayes Factor = 246.237
contains 11 variants
0.9100
Cluster X0185
log Bayes Factor = 84.7127
contains 6 variants
0.9096
Cluster X0210
log Bayes Factor = 426.159
contains 17 variants
0.9072
Cluster X0083
log Bayes Factor = 351.917
contains 13 variants
0.9026
Cluster X0145
log Bayes Factor = 274.587
contains 11 variants
0.9017
Cluster X0277
log Bayes Factor = 726.213
contains 23 variants
0.8957
Cluster X0126
log Bayes Factor = 384.432
contains 15 variants
0.8950
Cluster X0222
log Bayes Factor = 431.582
contains 17 variants
0.8924
Cluster X0161
log Bayes Factor = 609.219
contains 20 variants
0.8874
Cluster X0030
log Bayes Factor = 216.364
contains 9 variants
0.8870
Cluster X0094
log Bayes Factor = 562.956
contains 18 variants
0.8811
Cluster X0032
log Bayes Factor = 255.737
contains 12 variants
0.8784
Cluster X0075
log Bayes Factor = 431.344
contains 16 variants
0.8755
Cluster X0049
log Bayes Factor = 597.061
contains 18 variants
0.8678
Cluster X0054
log Bayes Factor = 197.338
contains 9 variants
0.8665
Cluster X0015
log Bayes Factor = 356.23
contains 15 variants
0.8645
Cluster X0005
log Bayes Factor = 282.915
contains 11 variants
0.8631
Cluster X0162
log Bayes Factor = 144.479
contains 9 variants
0.8624
Cluster X0026
log Bayes Factor = 232.119
contains 9 variants
0.8623
Cluster X0029
log Bayes Factor = 709.102
contains 23 variants
0.8560
Cluster X0177
log Bayes Factor = 254.872
contains 10 variants
0.8557
Cluster X0256
log Bayes Factor = 211.588
contains 9 variants
0.8492
Cluster X0091
log Bayes Factor = 303.64
contains 12 variants
0.8486
Cluster X0037
log Bayes Factor = 171.712
contains 6 variants
0.8486
Cluster X0197
log Bayes Factor = 158.582
contains 8 variants
0.8461
Cluster X0204
log Bayes Factor = 169.796
contains 8 variants
0.8410
Cluster X0082
log Bayes Factor = 496.905
contains 17 variants
0.8322
Cluster X0283
log Bayes Factor = 162.98
contains 9 variants
0.8298
Cluster X0176
log Bayes Factor = 407.797
contains 14 variants
0.8279
Cluster X0164
log Bayes Factor = 463.793
contains 16 variants
0.8267
Cluster X0069
log Bayes Factor = 519.392
contains 20 variants
0.8240
Cluster X0133
log Bayes Factor = 224.204
contains 11 variants
0.8204
Cluster X0050
log Bayes Factor = 397.79
contains 16 variants
0.8195
Cluster X0152
log Bayes Factor = 331.156
contains 10 variants
0.8150
Cluster X0232
log Bayes Factor = 695.273
contains 23 variants
0.8141
Cluster X0227
log Bayes Factor = 249.287
contains 11 variants
0.8092
Cluster X0154
log Bayes Factor = 282.084
contains 12 variants
0.8082
Cluster X0246
log Bayes Factor = 121.08
contains 5 variants
0.8032
Cluster X0053
log Bayes Factor = 218.825
contains 12 variants
0.8025
Cluster X0051
log Bayes Factor = 376.793
contains 14 variants
0.7980
Cluster X0192
log Bayes Factor = 402.511
contains 14 variants
0.7949
Cluster X0070
log Bayes Factor = 421.182
contains 15 variants
0.7905
Cluster X0170
log Bayes Factor = 264.081
contains 11 variants
0.7830
Cluster X0279
log Bayes Factor = 52.8832
contains 2 variants
0.7823
Cluster X0205
log Bayes Factor = 674.183
contains 18 variants
0.7778
Cluster X0014
log Bayes Factor = 131.677
contains 6 variants
0.7775
Cluster X0059
log Bayes Factor = 922.497
contains 26 variants
0.7771
Cluster X0098
log Bayes Factor = 246.226
contains 8 variants
0.7763
Cluster X0093
log Bayes Factor = 289.878
contains 10 variants
0.7721
Cluster X0081
log Bayes Factor = 278.568
contains 10 variants
0.7711
Cluster X0224
log Bayes Factor = 278.692
contains 11 variants
0.7603
Cluster X0271
log Bayes Factor = 256.743
contains 10 variants
0.7554
Cluster X0058
log Bayes Factor = 183.199
contains 8 variants
0.7532
Cluster X0153
log Bayes Factor = 328.394
contains 11 variants
0.7464
Cluster X0165
log Bayes Factor = 303.727
contains 12 variants
0.7308
Cluster X0052
log Bayes Factor = 654.387
contains 25 variants
0.7286
Cluster X0125
log Bayes Factor = 215.738
contains 7 variants
0.7272
Cluster X0109
log Bayes Factor = 257.685
contains 11 variants
0.7230
Cluster X0039
log Bayes Factor = 463.231
contains 17 variants
0.7228
Cluster X0042
log Bayes Factor = 307.243
contains 12 variants
0.7103
Cluster X0253
log Bayes Factor = 331.491
contains 13 variants
0.7005
Cluster X0248
log Bayes Factor = 254.854
contains 10 variants
0.6946
Cluster X0040
log Bayes Factor = 542.747
contains 16 variants
0.6890
Cluster X0045
log Bayes Factor = 446.264
contains 16 variants
0.6861
Cluster X0038
log Bayes Factor = 31.1234
contains 2 variants
0.6819
Cluster X0067
log Bayes Factor = 179.381
contains 8 variants
0.6817
Cluster X0085
log Bayes Factor = 138.902
contains 6 variants
0.6757
Cluster X0167
log Bayes Factor = 136.48
contains 6 variants
0.6743
Cluster X0020
log Bayes Factor = 557.721
contains 18 variants
0.6685
Cluster X0166
log Bayes Factor = 230.746
contains 8 variants
0.6658
Cluster X0159
log Bayes Factor = 152.327
contains 7 variants
0.6615
Cluster X0120
log Bayes Factor = 79.6695
contains 4 variants
0.6548
Cluster X0100
log Bayes Factor = 730.252
contains 26 variants
0.6545
Cluster X0199
log Bayes Factor = 350.038
contains 3 variants
0.6472
Cluster X0214
log Bayes Factor = 186.582
contains 8 variants
0.6459
Cluster X0088
log Bayes Factor = 243.609
contains 9 variants
0.6441
Cluster X0327
log Bayes Factor = 118.248
contains 3 variants
0.6382
Cluster X0055
log Bayes Factor = 274.911
contains 10 variants
0.6379
Cluster X0024
log Bayes Factor = 309.44
contains 13 variants
0.6311
Cluster X0315
log Bayes Factor = 42.686
contains 2 variants
0.6297
Cluster X0293
log Bayes Factor = 169.051
contains 7 variants
0.6236
Cluster X0320
log Bayes Factor = 110.964
contains 6 variants
0.6188
Cluster X0258
log Bayes Factor = 104.851
contains 6 variants
0.6079
Cluster X0063
log Bayes Factor = 107.557
contains 5 variants
0.5999
Cluster X0110
log Bayes Factor = 721.325
contains 13 variants
0.5996
Cluster X0244
log Bayes Factor = 122.647
contains 5 variants
0.5902
Cluster X0257
log Bayes Factor = 281.184
contains 10 variants
0.5864
Cluster X0122
log Bayes Factor = 219.114
contains 9 variants
0.5858
Cluster X0047
log Bayes Factor = 378.621
contains 14 variants
0.5781
Cluster X0174
log Bayes Factor = 214.209
contains 8 variants
0.5768
Cluster X0201
log Bayes Factor = 368.049
contains 13 variants
0.5643
Cluster X0057
log Bayes Factor = 439.35
contains 16 variants
0.5633
Cluster X0237
log Bayes Factor = 123.902
contains 6 variants
0.5558
Cluster X0137
log Bayes Factor = 120.748
contains 4 variants
0.5470
Cluster X0290
log Bayes Factor = 333.908
contains 13 variants
0.5447
Cluster X0184
log Bayes Factor = 188.416
contains 8 variants
0.5239
Cluster X0156
log Bayes Factor = 226.954
contains 9 variants
0.5205
Cluster X0212
log Bayes Factor = 300.777
contains 10 variants
0.5195
Cluster X0142
log Bayes Factor = 295.63
contains 12 variants
0.5165
Cluster X0071
log Bayes Factor = 131.269
contains 6 variants
0.5109
Cluster X0189
log Bayes Factor = 149.681
contains 5 variants
0.5094
Cluster X0003
log Bayes Factor = 195.6
contains 8 variants
0.5057
Cluster X0155
log Bayes Factor = 348.568
contains 12 variants
0.5017
Cluster X0263
log Bayes Factor = 240.36
contains 13 variants
0.4997
Cluster X0139
log Bayes Factor = 304.555
contains 10 variants
0.4818
Cluster X0086
log Bayes Factor = 131.002
contains 8 variants
0.4779
Cluster X0134
log Bayes Factor = 151.731
contains 8 variants
0.4763
Cluster X0046
log Bayes Factor = 387.972
contains 16 variants
0.4728
Cluster X0065
log Bayes Factor = 53.0717
contains 3 variants
0.4702
Cluster X0143
log Bayes Factor = 179.808
contains 8 variants
0.4485
Cluster X0182
log Bayes Factor = 91.4459
contains 4 variants
0.4338
Cluster X0021
log Bayes Factor = 338.631
contains 13 variants
0.4199
Cluster X0238
log Bayes Factor = 97.9307
contains 4 variants
0.4164
Cluster X0147
log Bayes Factor = 133.509
contains 9 variants
0.4121
Cluster X0231
log Bayes Factor = 82.3185
contains 5 variants
0.3942
Cluster X0284
log Bayes Factor = 192.532
contains 9 variants
0.3912
Cluster X0220
log Bayes Factor = 142.284
contains 7 variants
0.3840
Cluster X0243
log Bayes Factor = 104.974
contains 6 variants
0.3697
Cluster X0273
log Bayes Factor = 109.896
contains 6 variants
0.3596
Cluster X0276
log Bayes Factor = 187.108
contains 9 variants
0.3378
Cluster X0012
log Bayes Factor = 112.432
contains 5 variants
0.2922
Cluster X0018
log Bayes Factor = 430.611
contains 18 variants
0.2828
Cluster X0171
log Bayes Factor = 291.293
contains 14 variants
0.2532
Cluster X0188
log Bayes Factor = 222.629
contains 14 variants
0.2440
Cluster X0079
log Bayes Factor = 413.803
contains 22 variants
0.2439
Cluster X0123
log Bayes Factor = 382.779
contains 14 variants
0.2255
Cluster X0062
log Bayes Factor = 68.7461
contains 4 variants
0.2244
Cluster X0001
log Bayes Factor = 167.541
contains 7 variants
0.2118
Cluster X0129
log Bayes Factor = 195.809
contains 7 variants
0.2011
Cluster X0163
log Bayes Factor = 122.554
contains 6 variants
0.1991
Cluster X0092
log Bayes Factor = 90.0773
contains 8 variants
0.1962
Cluster X0061
log Bayes Factor = 293.105
contains 15 variants
0.1926
Cluster X0138
log Bayes Factor = 43.7891
contains 4 variants
0.1924
Cluster X0111
log Bayes Factor = 403.183
contains 18 variants
0.1825
Cluster X0041
log Bayes Factor = 306.192
contains 14 variants
0.1716
Cluster X0004
log Bayes Factor = 32.8452
contains 2 variants
0.1579
Cluster X0118
log Bayes Factor = 91.1908
contains 5 variants
0.1519
Cluster X0013
log Bayes Factor = 548.265
contains 23 variants
0.1508
Cluster X0193
log Bayes Factor = 303.265
contains 16 variants
0.1495
Cluster X0275
log Bayes Factor = 219.726
contains 10 variants
0.1412
Cluster X0218
log Bayes Factor = 425.579
contains 18 variants
0.1237
Cluster X0209
log Bayes Factor = 214.798
contains 8 variants
0.1085
Cluster X0028
log Bayes Factor = 120.445
contains 7 variants
0.1084
Cluster X0240
log Bayes Factor = 104.862
contains 6 variants
0.1039
Cluster X0007
log Bayes Factor = 107.567
contains 7 variants
0.0813
Cluster X0084
log Bayes Factor = 433.078
contains 21 variants
0.0742
Cluster X0191
log Bayes Factor = 163.555
contains 8 variants
0.0610
Cluster X0078
log Bayes Factor = 203.49
contains 11 variants
0.0592
 
 

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

This website was created, designed, and edited by ORCID iD iconPatrick K. Albers

The contents of TreeWAS.org are available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) with attribution (citation) required.

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