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Variant clusters
Hospitalization Episode Statistics (HES)
Genetic variants: 36,212
Diagnostic terms: × 19,155
Association results: = 693,640,860
Self-Reported Statistics (SRS)
Genetic variants: 28,458
Diagnostic terms: × 474
Association results: = 13,489,092
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Diagnostic term associations

Hospitalization Episode Statistics (HES)

M71.2
Synovial cyst of popliteal space [Baker]
Parent term
M71 Other bursopathies
Nested terms
M71.20 Synovial cyst of popliteal space [Baker]-Mult sites
M71.21 Synovial cyst of popliteal space [Baker]-Shldr region
M71.22 Synovial cyst of popliteal space [Baker]-Upper arm
M71.23 Synovial cyst of popliteal space [Baker]-Forearm
M71.24 Synovial cyst of popliteal space [Baker]-Hand
M71.25 Synovial cyst of popliteal space [Baker]-Pelvic/Thigh
M71.26 Synovial cyst of popliteal space [Baker]-Lower Leg
M71.27 Synovial cyst of popliteal space [Baker]-Ankle/Foot
M71.28 Synovial cyst of popliteal space [Baker]-Other
M71.29 Synovial cyst of popliteal space [Baker]-Site unspec
What are diagnostic terms?
Variant effects

Click on a variant to see its association results.

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Genome-wide   Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Results table
Variant Risk
posterior probability
 No effect
posterior probability
 Protective
posterior probability
  
rs79002142 lBF = 11.7979   Chr12 : 85,143,591
0.605 0.395 0.000
rs56269309 lBF = 12.8645   Chr12 : 127,453,025
0.601 0.399 0.000
rs74565952 lBF = 16.1651   Chr12 : 71,112,797
0.576 0.424 0.000
rs10506458 lBF = 2.80462   Chr12 : 63,445,092
0.573 0.427 0.000
rs79680354 lBF = 22.0763   Chr12 : 119,361,070
0.572 0.428 0.000
rs12423747 lBF = 15.1947   Chr12 : 71,084,299
0.557 0.443 0.000
rs2417373 lBF = 14.5305   Chr12 : 14,744,468
0.547 0.453 0.000
rs78008978 lBF = 13.3787   Chr12 : 77,282,680
0.542 0.457 0.000
rs16914920 lBF = 12.1807   Chr12 : 19,128,595
0.540 0.459 0.000
rs35446494 lBF = 7.95755   Chr12 : 119,533,218
0.537 0.463 0.000
rs12813285 lBF = 22.3499   Chr12 : 68,206,219
0.535 0.465 0.000
Affx-8411664 lBF = 18.4862   Chr12 : 71,094,955
0.534 0.466 0.000
rs117825839 lBF = 16.5381   Chr12 : 28,978,196
0.524 0.476 0.000
rs80160299 lBF = 15.0308   Chr12 : 66,159,224
0.522 0.478 0.000
rs5742692 lBF = 2.17819   Chr12 : 102,799,598
0.519 0.481 0.000
rs77662038 lBF = 13.6756   Chr12 : 83,497,229
0.519 0.481 0.000
rs74911677 lBF = 20.5271   Chr12 : 122,015,993
0.513 0.487 0.000
rs114453043 lBF = 22.0948   Chr12 : 25,461,756
0.505 0.495 0.000
rs117624816 lBF = 14.1981   Chr12 : 18,210,143
0.501 0.499 0.000
rs17813263 lBF = 23.117   Chr12 : 69,481,381
0.498 0.502 0.000
rs11051689 lBF = 13.3747   Chr12 : 32,084,827
0.495 0.504 0.000
rs78549223 lBF = 13.151   Chr12 : 71,168,008
0.494 0.506 0.000
rs11059555 lBF = 14.4188   Chr12 : 128,646,039
0.491 0.509 0.000
rs9332958 lBF = 5.25634   Chr12 : 16,519,263
0.489 0.511 0.000
rs79015790 lBF = 14.8688   Chr12 : 128,700,249
0.486 0.514 0.000
rs12821981 lBF = 18.716   Chr12 : 2,741,217
0.486 0.514 0.000
rs116877397 lBF = 30.7668   Chr12 : 121,162,996
0.484 0.515 0.000
rs118079879 lBF = 5.09035   Chr12 : 41,713,306
0.479 0.521 0.000
rs78437391 lBF = 22.4064   Chr12 : 129,229,615
0.477 0.523 0.000
rs17722134 lBF = 13.8489   Chr12 : 72,401,694
0.473 0.526 0.000
rs117458579 lBF = 15.4218   Chr12 : 15,351,989
0.473 0.527 0.000
rs73114523 lBF = 14.6366   Chr12 : 54,602,032
0.468 0.532 0.000
rs76796201 lBF = 14.1948   Chr12 : 23,091,755
0.466 0.533 0.000
rs117139804 lBF = 18.4888   Chr12 : 116,233,671
0.466 0.534 0.000
rs117470014 lBF = 18.6761   Chr12 : 74,652,195
0.466 0.534 0.000
rs115720202 lBF = 18.7627   Chr12 : 89,746,581
0.465 0.535 0.000
rs7307123 lBF = 21.9581   Chr12 : 54,524,397
0.465 0.535 0.000
rs117559199 lBF = 8.42044   Chr12 : 75,424,551
0.462 0.538 0.000
rs2089222 lBF = 1.58966   Chr12 : 117,002,658
0.458 0.541 0.000
rs117089640 lBF = 23.0292   Chr12 : 125,048,557
0.458 0.542 0.000
rs7305482 lBF = 8.02751   Chr12 : 62,582,231
0.455 0.544 0.000
rs59753639 lBF = 4.25806   Chr12 : 25,140,690
0.455 0.545 0.000
rs79944777 lBF = 10.9261   Chr12 : 73,011,538
0.454 0.545 0.000
rs11174454 lBF = 8.97302   Chr12 : 62,781,002
0.453 0.547 0.000
rs73217910 lBF = 14.853   Chr12 : 118,450,865
0.453 0.547 0.000
rs74910874 lBF = 2.61067   Chr12 : 67,086,810
0.448 0.551 0.000
rs117802803 lBF = 21.4181   Chr12 : 22,796,804
0.443 0.557 0.000
rs192051543 lBF = 14.1247   Chr12 : 22,657,770
0.441 0.559 0.000
rs35587409 lBF = 12.2827   Chr12 : 100,841,306
0.437 0.562 0.000
rs117636037 lBF = 18.8537   Chr12 : 38,519,375
0.433 0.566 0.000
rs78294386 lBF = 14.58   Chr12 : 107,963,652
0.431 0.569 0.000
rs1386003 lBF = 12.5875   Chr12 : 13,213,682
0.431 0.569 0.000
rs117291831 lBF = 7.6951   Chr12 : 127,045,967
0.427 0.573 0.000
rs77649004 lBF = 14.247   Chr12 : 96,135,916
0.427 0.573 0.000
rs76450399 lBF = 14.1937   Chr12 : 9,143,781
0.423 0.577 0.000
rs78321382 lBF = 14.0322   Chr12 : 17,070,922
0.422 0.578 0.000
rs12814941 lBF = 12.4883   Chr12 : 106,408,172
0.421 0.578 0.000
rs76409154 lBF = 20.1612   Chr12 : 85,692,134
0.419 0.580 0.000
rs117138325 lBF = 14.5458   Chr12 : 74,850,188
0.418 0.582 0.000
rs76595471 lBF = 13.0273   Chr12 : 80,228,443
0.413 0.586 0.000
rs75489010 lBF = 27.7624   Chr12 : 115,986,702
0.413 0.587 0.000
rs117863495 lBF = 14.7593   Chr12 : 129,432,374
0.399 0.601 0.000
rs117439611 lBF = 14.8831   Chr12 : 520,944
0.398 0.602 0.000
rs75876943 lBF = 15.0045   Chr12 : 86,555,845
0.397 0.602 0.000
rs76242156 lBF = 19.5711   Chr12 : 65,043,774
0.397 0.603 0.000
rs12423247 lBF = 0.921356   Chr12 : 96,858,362
0.396 0.604 0.000
rs117409850 lBF = 13.4266   Chr12 : 106,057,582
0.396 0.604 0.000
rs116962450 lBF = 7.81708   Chr12 : 90,500,741
0.389 0.611 0.000
rs144700679 lBF = 7.09223   Chr12 : 115,468,959
0.389 0.611 0.000
rs117929870 lBF = 16.9839   Chr12 : 108,524,849
0.384 0.616 0.000
rs12582852 lBF = 14.3759   Chr12 : 3,315,933
0.378 0.622 0.000
rs17443266 lBF = 15.2354   Chr12 : 19,169,453
0.374 0.626 0.000
rs2160519 lBF = 9.54207   Chr12 : 13,787,846
0.374 0.626 0.000
rs2292303 lBF = 0.924716   Chr12 : 102,513,531
0.372 0.628 0.000
rs12582659 lBF = 4.82974   Chr12 : 76,064,528
0.371 0.628 0.000
rs73201485 lBF = 11.279   Chr12 : 114,791,319
0.369 0.631 0.000
rs77572683 lBF = 7.85519   Chr12 : 114,261,767
0.369 0.631 0.000
rs181609621 lBF = 1.56948   Chr12 : 32,810,759
0.360 0.640 0.000
rs7298767 lBF = 17.6072   Chr12 : 22,475,701
0.360 0.640 0.000
rs11108227 lBF = 16.4201   Chr12 : 96,134,001
0.352 0.648 0.000
rs12370770 lBF = 24.384   Chr12 : 112,277,084
0.351 0.649 0.000
rs138477082 lBF = 2.62368   Chr12 : 103,796,611
0.342 0.658 0.000
rs12321507 lBF = 16.2879   Chr12 : 96,134,818
0.339 0.660 0.000
rs187353341 lBF = 19.0434   Chr12 : 121,557,376
0.337 0.663 0.000
rs56360506 lBF = 10.2114   Chr12 : 53,222,800
0.336 0.663 0.000
rs188610 lBF = 2.31323   Chr12 : 313,839
0.335 0.665 0.000
rs34574480 lBF = 13.3586   Chr12 : 115,307,567
0.334 0.666 0.000
rs17102257 lBF = 14.6206   Chr12 : 54,126,061
0.334 0.666 0.000
rs117605016 lBF = 28.0976   Chr12 : 129,614,385
0.333 0.667 0.000
rs1653608 lBF = 16.5227   Chr12 : 121,706,733
0.333 0.667 0.000
rs117437287 lBF = 16.5299   Chr12 : 23,389,839
0.330 0.670 0.000
rs117029533 lBF = 21.9889   Chr12 : 66,632,067
0.327 0.673 0.000
rs141480969 lBF = 0.733874   Chr12 : 62,496,278
0.326 0.674 0.000
rs215398 lBF = 19.4313   Chr12 : 47,767,134
0.325 0.675 0.000
rs76001134 lBF = 19.3411   Chr12 : 23,209,903
0.323 0.677 0.000
rs35729753 lBF = 17.3029   Chr12 : 66,672,379
0.322 0.678 0.000
rs118113273 lBF = 22.5923   Chr12 : 128,300,100
0.319 0.681 0.000
rs117761474 lBF = 15.8826   Chr12 : 113,029,356
0.313 0.687 0.000
rs11067763 lBF = 4.33511   Chr12 : 116,198,341
0.312 0.688 0.000
rs111969502 lBF = 5.3967   Chr12 : 59,848,381
0.312 0.688 0.001
rs73164250 lBF = 17.0593   Chr12 : 84,624,334
0.311 0.688 0.000
rs5744807 lBF = 13.1175   Chr12 : 133,243,621
0.308 0.692 0.000
rs73141422 lBF = 22.399   Chr12 : 83,882,469
0.307 0.692 0.001
rs78574971 lBF = 12.9395   Chr12 : 52,023,925
0.307 0.693 0.000
rs7307889 lBF = 7.08994   Chr12 : 5,981,353
0.303 0.697 0.000
rs7299341 lBF = 5.99167   Chr12 : 83,224,324
0.298 0.701 0.000
rs11066313 lBF = 14.8578   Chr12 : 112,893,414
0.296 0.704 0.000
rs117091826 lBF = 24.5799   Chr12 : 112,629,713
0.292 0.708 0.000
rs12230170 lBF = 6.64286   Chr12 : 129,247,383
0.292 0.708 0.000
rs10506821 lBF = 13.2804   Chr12 : 80,496,923
0.286 0.714 0.000
rs75311705 lBF = 0.456159   Chr12 : 125,714,596
0.286 0.714 0.000
rs80002652 lBF = 18.6612   Chr12 : 107,437,422
0.283 0.716 0.000
rs111825271 lBF = 10.5466   Chr12 : 66,344,706
0.281 0.719 0.000
rs3809128 lBF = 2.10909   Chr12 : 56,709,919
0.279 0.721 0.000
rs182057829 lBF = 2.49683   Chr12 : 97,412,327
0.273 0.726 0.000
rs191780267 lBF = 4.50227   Chr12 : 89,289,255
0.267 0.733 0.000
rs2279695 lBF = 6.13321   Chr12 : 117,154,262
0.266 0.734 0.000
rs11065791 lBF = 12.9532   Chr12 : 111,460,000
0.260 0.740 0.000
rs75289085 lBF = 19.4964   Chr12 : 18,147,653
0.259 0.741 0.000
rs10859567 lBF = 2.9515   Chr12 : 94,126,925
0.258 0.742 0.000
rs6580622 lBF = 15.5075   Chr12 : 47,936,778
0.257 0.742 0.000
rs143136847 lBF = 1.54314   Chr12 : 82,748,339
0.253 0.747 0.000
rs1291621 lBF = 15.6995   Chr12 : 46,340,821
0.250 0.750 0.000
rs17040357 lBF = 13.7026   Chr12 : 108,665,316
0.248 0.752 0.000
rs2722223 lBF = 24.9818   Chr12 : 90,233,876
0.247 0.752 0.000
rs73200436 lBF = 2.81861   Chr12 : 110,062,693
0.246 0.754 0.000
rs78221103 lBF = 16.6479   Chr12 : 104,562,673
0.244 0.756 0.000
rs11837432 lBF = 16.9657   Chr12 : 2,170,893
0.240 0.759 0.000
rs11179079 lBF = 7.3206   Chr12 : 72,494,386
0.240 0.759 0.000
rs12304534 lBF = 8.83589   Chr12 : 89,683,643
0.240 0.760 0.000
rs71454665 lBF = 8.54321   Chr12 : 121,198,711
0.235 0.765 0.000
rs12823357 lBF = 6.08625   Chr12 : 55,473,859
0.229 0.771 0.000
rs80132640 lBF = 11.0963   Chr12 : 49,426,460
0.225 0.774 0.000
rs61943445 lBF = 13.7019   Chr12 : 118,861,521
0.216 0.784 0.000
rs76191003 lBF = 9.4885   Chr12 : 47,182,531
0.216 0.784 0.000
rs74452899 lBF = 12.3113   Chr12 : 89,024,239
0.213 0.787 0.000
rs73211928 lBF = 9.06643   Chr12 : 118,039,876
0.211 0.789 0.000
rs117557466 lBF = 12.1727   Chr12 : 69,802,569
0.211 0.789 0.000
rs10859563 lBF = 2.0749   Chr12 : 94,120,339
0.210 0.790 0.000
rs149104283 lBF = 2.00778   Chr12 : 21,083,862
0.206 0.793 0.000
rs11175593 lBF = 2.45774   Chr12 : 40,601,940
0.186 0.814 0.000
rs73313995 lBF = 22.0276   Chr12 : 33,622,807
0.185 0.815 0.000
rs61921073 lBF = 6.44028   Chr12 : 30,660,861
0.184 0.816 0.000
rs150954431 lBF = 0.66025   Chr12 : 125,002,323
0.183 0.817 0.000
rs79918060 lBF = 17.5524   Chr12 : 58,407,669
0.182 0.817 0.000
rs111341849 lBF = 13.9983   Chr12 : 83,961,998
0.181 0.819 0.000
rs61756485 lBF = 16.787   Chr12 : 99,020,125
0.181 0.819 0.000
rs4766986 lBF = 8.99695   Chr12 : 113,076,475
0.177 0.822 0.000
rs11044722 lBF = 15.4222   Chr12 : 19,781,710
0.177 0.822 0.000
rs3217863 lBF = 9.55969   Chr12 : 4,399,496
0.177 0.822 0.000
rs7294372 lBF = 0.932637   Chr12 : 114,637,423
0.170 0.830 0.000
rs12308914 lBF = 12.8877   Chr12 : 104,633,842
0.161 0.839 0.000
rs2900174 lBF = 7.38903   Chr12 : 11,547,532
0.158 0.842 0.000
rs12371484 lBF = 19.7008   Chr12 : 111,872,722
0.156 0.844 0.000
rs77821460 lBF = 20.1742   Chr12 : 20,274,936
0.155 0.845 0.000
rs11611673 lBF = 13.5862   Chr12 : 121,451,150
0.149 0.850 0.000
rs3794288 lBF = 0.216509   Chr12 : 2,789,221
0.146 0.854 0.000
rs77103806 lBF = 6.36663   Chr12 : 23,021,423
0.144 0.855 0.001
rs12310380 lBF = 8.99711   Chr12 : 104,478,790
0.139 0.860 0.001
rs76775795 lBF = 13.6666   Chr12 : 115,385,431
0.137 0.863 0.000
rs75626916 lBF = 11.7941   Chr12 : 108,663,870
0.137 0.863 0.000
rs10777534 lBF = 5.44821   Chr12 : 94,084,878
0.135 0.865 0.000
rs11057864 lBF = 6.42106   Chr12 : 125,335,950
0.133 0.867 0.000
rs12422544 lBF = 1.68441   Chr12 : 40,528,432
0.129 0.871 0.000
rs1528287 lBF = 13.6349   Chr12 : 80,985,872
0.128 0.872 0.000
rs1235153 lBF = 9.04692   Chr12 : 48,110,325
0.126 0.873 0.000
rs116938548 lBF = 0.178688   Chr12 : 4,808,251
0.123 0.877 0.000
rs117303215 lBF = 9.21583   Chr12 : 129,627,812
0.121 0.879 0.000
rs4238083 lBF = 14.8083   Chr12 : 42,924,769
0.120 0.879 0.000
rs112742247 lBF = 13.3959   Chr12 : 85,030,619
0.118 0.881 0.000
rs61919599 lBF = 9.83827   Chr12 : 528,351
0.117 0.883 0.000
rs76270203 lBF = 1.90441   Chr12 : 113,936,996
0.108 0.892 0.000
rs117759274 lBF = 14.7453   Chr12 : 23,131,855
0.105 0.894 0.000
rs11608709 lBF = 15.4681   Chr12 : 99,302,859
0.089 0.911 0.000
rs117629949 lBF = 14.77   Chr12 : 25,021,224
0.088 0.911 0.000
rs187986843 lBF = 15.061   Chr12 : 69,080,770
0.087 0.913 0.000
rs79476482 lBF = 14.9329   Chr12 : 76,084,550
0.085 0.914 0.000
rs117839344 lBF = 8.17878   Chr12 : 58,183,636
0.085 0.915 0.000
rs116910038 lBF = 0.0694182   Chr12 : 85,424,093
0.082 0.918 0.000
rs144288546 lBF = 0.146461   Chr12 : 129,069,682
0.082 0.918 0.000
rs78851502 lBF = 8.34221   Chr12 : 40,811,944
0.077 0.922 0.000
rs199710891 lBF = 5.87106   Chr12 : 14,273,071
0.077 0.923 0.000
rs993226 lBF = 0.111824   Chr12 : 84,886,573
0.072 0.928 0.000
rs75593565 lBF = 13.6234   Chr12 : 32,115,266
0.068 0.931 0.000
rs4149639 lBF = 0.234732   Chr12 : 6,442,001
0.067 0.933 0.000
rs12425131 lBF = 16.2355   Chr12 : 82,984,879
0.062 0.937 0.000
rs7309269 lBF = 13.6679   Chr12 : 7,757,834
0.054 0.945 0.000
rs11115322 lBF = 13.8059   Chr12 : 83,019,188
0.054 0.946 0.000
rs17432871 lBF = 6.59959   Chr12 : 121,542,128
0.051 0.948 0.000
rs10773087 lBF = 5.56414   Chr12 : 124,878,404
0.051 0.949 0.000
rs34934130 lBF = 11.9795   Chr12 : 121,502,913
0.047 0.953 0.000
rs12316797 lBF = 1.37316   Chr12 : 43,160,744
0.044 0.956 0.001
rs10880784 lBF = 0.0419605   Chr12 : 45,843,490
0.042 0.958 0.000
rs17528414 lBF = 17.7734   Chr12 : 32,352,055
0.041 0.958 0.001
rs73045775 lBF = 23.3857   Chr12 : 8,674,905
0.041 0.959 0.000
rs11609031 lBF = 16.3836   Chr12 : 99,307,725
0.041 0.959 0.000
rs704080 lBF = 11.6648   Chr12 : 89,749,223
0.036 0.963 0.000
rs16906714 lBF = 0.0571485   Chr12 : 30,860,557
0.034 0.966 0.000
rs12322695 lBF = 0.0399753   Chr12 : 117,199,414
0.033 0.967 0.000
rs703556 lBF = 0.0322573   Chr12 : 103,011,894
0.030 0.970 0.000
rs7304057 lBF = 0.0675331   Chr12 : 131,352,562
0.017 0.982 0.000
rs117492744 lBF = 13.2788   Chr12 : 29,747,631
0.016 0.984 0.000
rs183825572 lBF = 0.0255777   Chr12 : 101,264,845
0.016 0.984 0.000
rs188255132 lBF = 0.0230843   Chr12 : 81,723,188
0.014 0.985 0.000
rs2172873 lBF = 0.108565   Chr12 : 103,125,690
0.013 0.986 0.000
rs61943529 lBF = 0.0213403   Chr12 : 118,601,856
0.013 0.987 0.000
rs2870946 lBF = 0.0641534   Chr12 : 68,596,661
0.013 0.987 0.000
rs79335261 lBF = 5.7548   Chr12 : 56,497,641
0.011 0.989 0.000
rs4594074 lBF = 0.0140546   Chr12 : 41,032,092
0.010 0.990 0.000
rs1442190 lBF = 0.0041724   Chr12 : 41,365,640
0.009 0.990 0.000
rs187293782 lBF = 0.0145963   Chr12 : 76,157,356
0.009 0.991 0.000
rs650466 lBF = 0.00802182   Chr12 : 118,646,661
0.009 0.991 0.000
rs12317268 lBF = -0.0286854   Chr12 : 21,352,541
0.009 0.991 0.000
rs57551647 lBF = 6.18396   Chr12 : 85,602,577
0.009 0.991 0.000
rs2708377 lBF = 0.00974402   Chr12 : 11,216,315
0.000 0.991 0.009
rs4378452 lBF = 20.7259   Chr12 : 111,504,033
0.008 0.991 0.001
rs1871395 lBF = -0.0242603   Chr12 : 21,352,315
0.008 0.991 0.000
rs78730305 lBF = 9.92833   Chr12 : 104,669,564
0.008 0.992 0.000
rs7294919 lBF = 0.090446   Chr12 : 117,327,592
0.008 0.992 0.000
rs1727313 lBF = 4.61449   Chr12 : 123,640,853
0.008 0.992 0.000
rs7968960 lBF = 18.337   Chr12 : 111,426,615
0.007 0.993 0.000
rs117154046 lBF = 0.0198739   Chr12 : 29,542,777
0.006 0.993 0.000
rs139660738 lBF = 0.00949875   Chr12 : 95,185,188
0.006 0.993 0.000
rs7965087 lBF = 10.4918   Chr12 : 112,548,562
0.006 0.994 0.000
rs77464658 lBF = -0.0198318   Chr12 : 43,984,228
0.006 0.994 0.000
rs12580240 lBF = 0.0613231   Chr12 : 129,646,572
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rs10850409 lBF = -0.0977622   Chr12 : 115,381,740
0.001 0.999 0.000
rs17824620 lBF = 0.0411077   Chr12 : 113,100,994
0.001 0.999 0.000
rs114588203 lBF = -0.0114496   Chr12 : 68,956,185
0.001 0.999 0.000
rs7342306 lBF = -0.0388606   Chr12 : 6,291,093
0.001 0.999 0.000
rs10444502 lBF = 0.200302   Chr12 : 118,353,871
0.001 0.999 0.000
rs140785266 lBF = 0.00305033   Chr12 : 86,195,923
0.001 0.999 0.000
rs7308134 lBF = -0.0292191   Chr12 : 1,987,245
0.000 0.999 0.001
rs17012589 lBF = -0.0334918   Chr12 : 85,516,904
0.000 0.999 0.001
rs1082714 lBF = -0.0745542   Chr12 : 67,628,831
0.000 0.999 0.001
rs7978895 lBF = -0.0953489   Chr12 : 43,570,515
0.001 0.999 0.000
rs542675489 lBF = -0.0969744   Chr12 : 120,994,888
0.001 0.999 0.000
rs118009632 lBF = 0.732821   Chr12 : 54,959,672
0.001 0.999 0.000
rs1690139 lBF = 0.260724   Chr12 : 76,272,677
0.000 0.999 0.000
rs10748180 lBF = 0.0453805   Chr12 : 72,071,045
0.001 0.999 0.000
rs144148493 lBF = 0.015726   Chr12 : 87,360,221
0.000 0.999 0.000
rs117483990 lBF = -0.00680357   Chr12 : 90,224,714
0.001 0.999 0.000
rs3782724 lBF = 0.0398054   Chr12 : 6,466,081
0.000 0.999 0.000
rs59448276 lBF = -0.00012332   Chr12 : 52,680,766
0.000 0.999 0.000
rs2217235 lBF = -0.130459   Chr12 : 87,145,223
0.000 0.999 0.001
rs2272046 lBF = 0.0593854   Chr12 : 66,224,461
0.001 0.999 0.000
rs17429217 lBF = 0.00288289   Chr12 : 117,295,333
0.001 0.999 0.000
rs601339 lBF = -0.0133245   Chr12 : 123,174,743
0.001 0.999 0.000
rs57866673 lBF = 6.11134   Chr12 : 112,633,304
0.001 0.999 0.000
rs11108495 lBF = 0.0259079   Chr12 : 96,807,917
0.001 0.999 0.000
rs1463605 lBF = 0.00786643   Chr12 : 30,113,883
0.001 0.999 0.000
rs7956193 lBF = 0.00706709   Chr12 : 113,491,784
0.000 0.999 0.001
rs142054194 lBF = 0.0063675   Chr12 : 86,864,240
0.000 0.999 0.001
rs17108344 lBF = -0.00155388   Chr12 : 70,954,464
0.000 0.999 0.000
rs79946301 lBF = -0.00185935   Chr12 : 130,117,149
0.000 0.999 0.001
rs300489 lBF = -0.0505258   Chr12 : 78,485,994
0.001 0.999 0.000
rs4357753 lBF = 5.99351   Chr12 : 112,740,709
0.001 0.999 0.000
rs4767631 lBF = 0.951209   Chr12 : 118,311,743
0.001 0.999 0.000
rs186879571 lBF = 0.0106335   Chr12 : 128,652,831
0.000 0.999 0.000
rs11177669 lBF = -0.00206854   Chr12 : 69,828,681
0.000 0.999 0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

 
Variant clusters with highest protective effect

(posterior probability > 0.05)

Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0052
log Bayes Factor = 654.387
contains 25 variants
0.9960
Cluster X0044
log Bayes Factor = 1165.44
contains 34 variants
0.9906
Cluster X0277
log Bayes Factor = 726.213
contains 23 variants
0.9836
Cluster X0110
log Bayes Factor = 721.325
contains 13 variants
0.9812
Cluster X0073
log Bayes Factor = 785.614
contains 25 variants
0.9801
Cluster X0261
log Bayes Factor = 420.614
contains 20 variants
0.9794
Cluster X0015
log Bayes Factor = 356.23
contains 15 variants
0.9793
Cluster X0127
log Bayes Factor = 276.004
contains 14 variants
0.9725
Cluster X0231
log Bayes Factor = 82.3185
contains 5 variants
0.9684
Cluster X0164
log Bayes Factor = 463.793
contains 16 variants
0.9611
Cluster X0029
log Bayes Factor = 709.102
contains 23 variants
0.9389
Cluster X0139
log Bayes Factor = 304.555
contains 10 variants
0.9292
Cluster X0278
log Bayes Factor = 173.437
contains 11 variants
0.9285
Cluster X0021
log Bayes Factor = 338.631
contains 13 variants
0.9283
Cluster X0045
log Bayes Factor = 446.264
contains 16 variants
0.9199
Cluster X0087
log Bayes Factor = 894.58
contains 26 variants
0.9188
Cluster X0162
log Bayes Factor = 144.479
contains 9 variants
0.9165
Cluster X0126
log Bayes Factor = 384.432
contains 15 variants
0.9157
Cluster X0059
log Bayes Factor = 922.497
contains 26 variants
0.9112
Cluster X0150
log Bayes Factor = 861.091
contains 26 variants
0.9003
Cluster X0106
log Bayes Factor = 980.916
contains 30 variants
0.8956
Cluster X0089
log Bayes Factor = 308.747
contains 13 variants
0.8940
Cluster X0184
log Bayes Factor = 188.416
contains 8 variants
0.8800
Cluster X0192
log Bayes Factor = 402.511
contains 14 variants
0.8793
Cluster X0222
log Bayes Factor = 431.582
contains 17 variants
0.8611
Cluster X0047
log Bayes Factor = 378.621
contains 14 variants
0.8596
Cluster X0033
log Bayes Factor = 379.444
contains 13 variants
0.8385
Cluster X0174
log Bayes Factor = 214.209
contains 8 variants
0.8371
Cluster X0159
log Bayes Factor = 152.327
contains 7 variants
0.8334
Cluster X0205
log Bayes Factor = 674.183
contains 18 variants
0.8330
Cluster X0170
log Bayes Factor = 264.081
contains 11 variants
0.8265
Cluster X0273
log Bayes Factor = 109.896
contains 6 variants
0.8263
Cluster X0042
log Bayes Factor = 307.243
contains 12 variants
0.8218
Cluster X0224
log Bayes Factor = 278.692
contains 11 variants
0.8208
Cluster X0143
log Bayes Factor = 179.808
contains 8 variants
0.8097
Cluster X0005
log Bayes Factor = 282.915
contains 11 variants
0.8091
Cluster X0054
log Bayes Factor = 197.338
contains 9 variants
0.8056
Cluster X0094
log Bayes Factor = 562.956
contains 18 variants
0.7982
Cluster X0209
log Bayes Factor = 214.798
contains 8 variants
0.7924
Cluster X0120
log Bayes Factor = 79.6695
contains 4 variants
0.7909
Cluster X0071
log Bayes Factor = 131.269
contains 6 variants
0.7876
Cluster X0142
log Bayes Factor = 295.63
contains 12 variants
0.7841
Cluster X0268
log Bayes Factor = 213.591
contains 8 variants
0.7833
Cluster X0253
log Bayes Factor = 331.491
contains 13 variants
0.7767
Cluster X0284
log Bayes Factor = 192.532
contains 9 variants
0.7705
Cluster X0213
log Bayes Factor = 405.918
contains 15 variants
0.7676
Cluster X0058
log Bayes Factor = 183.199
contains 8 variants
0.7657
Cluster X0274
log Bayes Factor = 454.783
contains 18 variants
0.7603
Cluster X0137
log Bayes Factor = 120.748
contains 4 variants
0.7577
Cluster X0040
log Bayes Factor = 542.747
contains 16 variants
0.7577
Cluster X0188
log Bayes Factor = 222.629
contains 14 variants
0.7499
Cluster X0256
log Bayes Factor = 211.588
contains 9 variants
0.7459
Cluster X0267
log Bayes Factor = 92.4806
contains 5 variants
0.7422
Cluster X0148
log Bayes Factor = 315.237
contains 11 variants
0.7417
Cluster X0109
log Bayes Factor = 257.685
contains 11 variants
0.7406
Cluster X0155
log Bayes Factor = 348.568
contains 12 variants
0.7379
Cluster X0161
log Bayes Factor = 609.219
contains 20 variants
0.7369
Cluster X0077
log Bayes Factor = 571.533
contains 17 variants
0.7342
Cluster X0212
log Bayes Factor = 300.777
contains 10 variants
0.7317
Cluster X0041
log Bayes Factor = 306.192
contains 14 variants
0.7208
Cluster X0075
log Bayes Factor = 431.344
contains 16 variants
0.7156
Cluster X0079
log Bayes Factor = 413.803
contains 22 variants
0.7115
Cluster X0019
log Bayes Factor = 372.36
contains 16 variants
0.7096
Cluster X0258
log Bayes Factor = 104.851
contains 6 variants
0.7081
Cluster X0124
log Bayes Factor = 336.468
contains 13 variants
0.7037
Cluster X0012
log Bayes Factor = 112.432
contains 5 variants
0.6995
Cluster X0176
log Bayes Factor = 407.797
contains 14 variants
0.6963
Cluster X0248
log Bayes Factor = 254.854
contains 10 variants
0.6936
Cluster X0085
log Bayes Factor = 138.902
contains 6 variants
0.6916
Cluster X0001
log Bayes Factor = 167.541
contains 7 variants
0.6888
Cluster X0257
log Bayes Factor = 281.184
contains 10 variants
0.6842
Cluster X0026
log Bayes Factor = 232.119
contains 9 variants
0.6830
Cluster X0320
log Bayes Factor = 110.964
contains 6 variants
0.6814
Cluster X0166
log Bayes Factor = 230.746
contains 8 variants
0.6795
Cluster X0024
log Bayes Factor = 309.44
contains 13 variants
0.6758
Cluster X0070
log Bayes Factor = 421.182
contains 15 variants
0.6691
Cluster X0049
log Bayes Factor = 597.061
contains 18 variants
0.6662
Cluster X0232
log Bayes Factor = 695.273
contains 23 variants
0.6645
Cluster X0163
log Bayes Factor = 122.554
contains 6 variants
0.6634
Cluster X0107
log Bayes Factor = 151.016
contains 1 variants
0.6595
Cluster X0055
log Bayes Factor = 274.911
contains 10 variants
0.6465
Cluster X0229
log Bayes Factor = 347.165
contains 13 variants
0.6454
Cluster X0211
log Bayes Factor = 15.2995
contains 2 variants
0.6391
Cluster X0154
log Bayes Factor = 282.084
contains 12 variants
0.6325
Cluster X0218
log Bayes Factor = 425.579
contains 18 variants
0.6310
Cluster X0152
log Bayes Factor = 331.156
contains 10 variants
0.6307
Cluster X0294
log Bayes Factor = 25.2869
contains 2 variants
0.6290
Cluster X0160
log Bayes Factor = 99.5328
contains 9 variants
0.6265
Cluster X0062
log Bayes Factor = 68.7461
contains 4 variants
0.6240
Cluster X0081
log Bayes Factor = 278.568
contains 10 variants
0.6222
Cluster X0237
log Bayes Factor = 123.902
contains 6 variants
0.6218
Cluster X0167
log Bayes Factor = 136.48
contains 6 variants
0.6178
Cluster X0063
log Bayes Factor = 107.557
contains 5 variants
0.6111
Cluster X0214
log Bayes Factor = 186.582
contains 8 variants
0.6064
Cluster X0088
log Bayes Factor = 243.609
contains 9 variants
0.6049
Cluster X0122
log Bayes Factor = 219.114
contains 9 variants
0.6046
Cluster X0129
log Bayes Factor = 195.809
contains 7 variants
0.6030
Cluster X0039
log Bayes Factor = 463.231
contains 17 variants
0.6011
Cluster X0259
log Bayes Factor = 246.237
contains 11 variants
0.6000
Cluster X0037
log Bayes Factor = 171.712
contains 6 variants
0.5983
Cluster X0098
log Bayes Factor = 246.226
contains 8 variants
0.5958
Cluster X0028
log Bayes Factor = 120.445
contains 7 variants
0.5946
Cluster X0069
log Bayes Factor = 519.392
contains 20 variants
0.5901
Cluster X0220
log Bayes Factor = 142.284
contains 7 variants
0.5849
Cluster X0240
log Bayes Factor = 104.862
contains 6 variants
0.5784
Cluster X0177
log Bayes Factor = 254.872
contains 10 variants
0.5783
Cluster X0145
log Bayes Factor = 274.587
contains 11 variants
0.5780
Cluster X0032
log Bayes Factor = 255.737
contains 12 variants
0.5770
Cluster X0227
log Bayes Factor = 249.287
contains 11 variants
0.5766
Cluster X0165
log Bayes Factor = 303.727
contains 12 variants
0.5746
Cluster X0082
log Bayes Factor = 496.905
contains 17 variants
0.5608
Cluster X0327
log Bayes Factor = 118.248
contains 3 variants
0.5604
Cluster X0046
log Bayes Factor = 387.972
contains 16 variants
0.5584
Cluster X0201
log Bayes Factor = 368.049
contains 13 variants
0.5566
Cluster X0067
log Bayes Factor = 179.381
contains 8 variants
0.5564
Cluster X0290
log Bayes Factor = 333.908
contains 13 variants
0.5522
Cluster X0223
log Bayes Factor = 122.347
contains 7 variants
0.5518
Cluster X0275
log Bayes Factor = 219.726
contains 10 variants
0.5473
Cluster X0153
log Bayes Factor = 328.394
contains 11 variants
0.5471
Cluster X0293
log Bayes Factor = 169.051
contains 7 variants
0.5455
Cluster X0208
log Bayes Factor = 40.6733
contains 2 variants
0.5450
Cluster X0189
log Bayes Factor = 149.681
contains 5 variants
0.5440
Cluster X0244
log Bayes Factor = 122.647
contains 5 variants
0.5434
Cluster X0243
log Bayes Factor = 104.974
contains 6 variants
0.5355
Cluster X0091
log Bayes Factor = 303.64
contains 12 variants
0.5318
Cluster X0057
log Bayes Factor = 439.35
contains 16 variants
0.5290
Cluster X0043
log Bayes Factor = 517.108
contains 20 variants
0.5277
Cluster X0263
log Bayes Factor = 240.36
contains 13 variants
0.5228
Cluster X0156
log Bayes Factor = 226.954
contains 9 variants
0.5169
Cluster X0194
log Bayes Factor = 189.9
contains 5 variants
0.5138
Cluster X0249
log Bayes Factor = 244.457
contains 11 variants
0.5074
Cluster X0203
log Bayes Factor = 363.522
contains 11 variants
0.5012
Cluster X0185
log Bayes Factor = 84.7127
contains 6 variants
0.4936
Cluster X0178
log Bayes Factor = 225.6
contains 9 variants
0.4926
Cluster X0048
log Bayes Factor = 358.819
contains 19 variants
0.4913
Cluster X0100
log Bayes Factor = 730.252
contains 26 variants
0.4875
Cluster X0020
log Bayes Factor = 557.721
contains 18 variants
0.4865
Cluster X0210
log Bayes Factor = 426.159
contains 17 variants
0.4820
Cluster X0173
log Bayes Factor = 654.164
contains 9 variants
0.4807
Cluster X0181
log Bayes Factor = 141.396
contains 6 variants
0.4804
Cluster X0103
log Bayes Factor = 194.456
contains 13 variants
0.4789
Cluster X0065
log Bayes Factor = 53.0717
contains 3 variants
0.4763
Cluster X0119
log Bayes Factor = 114.358
contains 6 variants
0.4753
Cluster X0050
log Bayes Factor = 397.79
contains 16 variants
0.4694
Cluster X0123
log Bayes Factor = 382.779
contains 14 variants
0.4675
Cluster X0182
log Bayes Factor = 91.4459
contains 4 variants
0.4610
Cluster X0236
log Bayes Factor = 83.9265
contains 3 variants
0.4571
Cluster X0271
log Bayes Factor = 256.743
contains 10 variants
0.4540
Cluster X0132
log Bayes Factor = 267.393
contains 11 variants
0.4476
Cluster X0193
log Bayes Factor = 303.265
contains 16 variants
0.4476
Cluster X0134
log Bayes Factor = 151.731
contains 8 variants
0.4467
Cluster X0016
log Bayes Factor = 246.869
contains 16 variants
0.4447
Cluster X0078
log Bayes Factor = 203.49
contains 11 variants
0.4439
Cluster X0095
log Bayes Factor = 179.348
contains 8 variants
0.4416
Cluster X0146
log Bayes Factor = 686.343
contains 22 variants
0.4385
Cluster X0191
log Bayes Factor = 163.555
contains 8 variants
0.4355
Cluster X0324
log Bayes Factor = 32.1341
contains 1 variants
0.4254
Cluster X0013
log Bayes Factor = 548.265
contains 23 variants
0.4250
Cluster X0035
log Bayes Factor = 620.567
contains 37 variants
0.4175
Cluster X0083
log Bayes Factor = 351.917
contains 13 variants
0.4149
Cluster X0117
log Bayes Factor = 453.246
contains 21 variants
0.4132
Cluster X0002
log Bayes Factor = 522.044
contains 22 variants
0.4123
Cluster X0074
log Bayes Factor = 353.38
contains 15 variants
0.4084
Cluster X0114
log Bayes Factor = 510.917
contains 25 variants
0.4079
Cluster X0093
log Bayes Factor = 289.878
contains 10 variants
0.4072
Cluster X0068
log Bayes Factor = 127.774
contains 6 variants
0.4069
Cluster X0171
log Bayes Factor = 291.293
contains 14 variants
0.4062
Cluster X0051
log Bayes Factor = 376.793
contains 14 variants
0.3998
Cluster X0131
log Bayes Factor = 143.942
contains 8 variants
0.3958
Cluster X0030
log Bayes Factor = 216.364
contains 9 variants
0.3945
Cluster X0321
log Bayes Factor = 162.562
contains 1 variants
0.3915
Cluster X0196
log Bayes Factor = 301.726
contains 18 variants
0.3883
Cluster X0133
log Bayes Factor = 224.204
contains 11 variants
0.3837
Cluster X0072
log Bayes Factor = 1189.98
contains 37 variants
0.3823
Cluster X0221
log Bayes Factor = 149.378
contains 10 variants
0.3817
Cluster X0246
log Bayes Factor = 121.08
contains 5 variants
0.3774
Cluster X0014
log Bayes Factor = 131.677
contains 6 variants
0.3773
Cluster X0061
log Bayes Factor = 293.105
contains 15 variants
0.3748
Cluster X0141
log Bayes Factor = 742.063
contains 30 variants
0.3722
Cluster X0140
log Bayes Factor = 164.536
contains 8 variants
0.3707
Cluster X0279
log Bayes Factor = 52.8832
contains 2 variants
0.3695
Cluster X0128
log Bayes Factor = 148.918
contains 15 variants
0.3510
Cluster X0339
log Bayes Factor = 56.078
contains 2 variants
0.3485
Cluster X0190
log Bayes Factor = 15.3889
contains 2 variants
0.3471
Cluster X0169
log Bayes Factor = 331.98
contains 16 variants
0.3466
Cluster X0064
log Bayes Factor = 166.06
contains 10 variants
0.3438
Cluster X0264
log Bayes Factor = 205.833
contains 10 variants
0.3430
Cluster X0199
log Bayes Factor = 350.038
contains 3 variants
0.3414
Cluster X0247
log Bayes Factor = 98.6507
contains 6 variants
0.3402
Cluster X0138
log Bayes Factor = 43.7891
contains 4 variants
0.3363
Cluster X0053
log Bayes Factor = 218.825
contains 12 variants
0.3362
Cluster X0283
log Bayes Factor = 162.98
contains 9 variants
0.3309
Cluster X0003
log Bayes Factor = 195.6
contains 8 variants
0.3259
Cluster X0195
log Bayes Factor = 167.337
contains 13 variants
0.3223
Cluster X0219
log Bayes Factor = 230.324
contains 15 variants
0.3221
Cluster X0157
log Bayes Factor = 172.957
contains 8 variants
0.3198
Cluster X0270
log Bayes Factor = 41.2082
contains 4 variants
0.3183
Cluster X0180
log Bayes Factor = 410.88
contains 15 variants
0.3107
Cluster X0276
log Bayes Factor = 187.108
contains 9 variants
0.3098
Cluster X0102
log Bayes Factor = 99.5678
contains 5 variants
0.3081
Cluster X0018
log Bayes Factor = 430.611
contains 18 variants
0.3066
Cluster X0080
log Bayes Factor = 455.123
contains 21 variants
0.2965
Cluster X0314
log Bayes Factor = 92.7289
contains 4 variants
0.2938
Cluster X0269
log Bayes Factor = 155.455
contains 9 variants
0.2775
Cluster X0147
log Bayes Factor = 133.509
contains 9 variants
0.2763
Cluster X0113
log Bayes Factor = 49.7598
contains 3 variants
0.2702
Cluster X0111
log Bayes Factor = 403.183
contains 18 variants
0.2661
Cluster X0204
log Bayes Factor = 169.796
contains 8 variants
0.2661
Cluster X0038
log Bayes Factor = 31.1234
contains 2 variants
0.2591
Cluster X0084
log Bayes Factor = 433.078
contains 21 variants
0.2483
Cluster X0125
log Bayes Factor = 215.738
contains 7 variants
0.2454
Cluster X0230
log Bayes Factor = 131.696
contains 7 variants
0.2435
Cluster X0076
log Bayes Factor = 310.928
contains 15 variants
0.2247
Cluster X0086
log Bayes Factor = 131.002
contains 8 variants
0.2231
Cluster X0297
log Bayes Factor = 63.8292
contains 4 variants
0.2154
Cluster X0179
log Bayes Factor = 426.274
contains 17 variants
0.1936
Cluster X0121
log Bayes Factor = 131.08
contains 9 variants
0.1934
Cluster X0004
log Bayes Factor = 32.8452
contains 2 variants
0.1653
Cluster X0309
log Bayes Factor = 222.015
contains 4 variants
0.1636
Cluster X0234
log Bayes Factor = 28.8983
contains 2 variants
0.1388
Cluster X0118
log Bayes Factor = 91.1908
contains 5 variants
0.1346
Cluster X0172
log Bayes Factor = 80.2701
contains 3 variants
0.1302
Cluster X0197
log Bayes Factor = 158.582
contains 8 variants
0.1299
Cluster X0315
log Bayes Factor = 42.686
contains 2 variants
0.1240
Cluster X0332
log Bayes Factor = 65.2374
contains 3 variants
0.1220
Cluster X0326
log Bayes Factor = 112.92
contains 5 variants
0.1203
Cluster X0225
log Bayes Factor = 36.4143
contains 3 variants
0.1040
Cluster X0238
log Bayes Factor = 97.9307
contains 4 variants
0.1034
Cluster X0328
log Bayes Factor = 380.087
contains 8 variants
0.0723
Cluster X0158
log Bayes Factor = 41.0301
contains 1 variants
0.0571
Cluster X0226
log Bayes Factor = 145.726
contains 8 variants
0.0553
 
 

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

This website was created, designed, and edited by ORCID iD iconPatrick K. Albers

The contents of TreeWAS.org are available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) with attribution (citation) required.

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