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Variant clusters
Hospitalization Episode Statistics (HES)
Genetic variants: 36,212
Diagnostic terms: × 19,155
Association results: = 693,640,860
Self-Reported Statistics (SRS)
Genetic variants: 28,458
Diagnostic terms: × 474
Association results: = 13,489,092
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Diagnostic term associations

Hospitalization Episode Statistics (HES)

E55
Vitamin D deficiency
Parent term
E50-E64 Other nutritional deficiencies
Nested terms
E55.0 Rickets, active
E55.9 Vitamin D deficiency, unspecified
What are diagnostic terms?
Variant effects

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Genome-wide   Chromosomes: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Results table
Variant Risk
posterior probability
 No effect
posterior probability
 Protective
posterior probability
  
rs704080 lBF = 11.6648   Chr12 : 89,749,223
0.856 0.144 0.000
rs11066313 lBF = 14.8578   Chr12 : 112,893,414
0.815 0.185 0.000
rs78321382 lBF = 14.0322   Chr12 : 17,070,922
0.802 0.198 0.000
rs10774624 lBF = 108.174   Chr12 : 111,833,788
0.000 0.220 0.780
rs12310380 lBF = 8.99711   Chr12 : 104,478,790
0.753 0.247 0.000
rs117557466 lBF = 12.1727   Chr12 : 69,802,569
0.734 0.266 0.000
rs3184504 lBF = 147.788   Chr12 : 111,884,608
0.734 0.266 0.000
rs11174454 lBF = 8.97302   Chr12 : 62,781,002
0.726 0.274 0.000
rs34934130 lBF = 11.9795   Chr12 : 121,502,913
0.693 0.307 0.000
rs4766578 lBF = 133.156   Chr12 : 111,904,371
0.000 0.307 0.693
rs11837432 lBF = 16.9657   Chr12 : 2,170,893
0.693 0.307 0.000
rs5744807 lBF = 13.1175   Chr12 : 133,243,621
0.690 0.310 0.000
rs653178 lBF = 141.209   Chr12 : 112,007,756
0.687 0.313 0.000
rs117492744 lBF = 13.2788   Chr12 : 29,747,631
0.676 0.324 0.000
rs10774625 lBF = 134.733   Chr12 : 111,910,219
0.675 0.325 0.000
rs7137828 lBF = 136.212   Chr12 : 111,932,800
0.000 0.328 0.672
rs597808 lBF = 138.181   Chr12 : 111,973,358
0.000 0.334 0.666
rs3217863 lBF = 9.55969   Chr12 : 4,399,496
0.662 0.338 0.000
rs7310615 lBF = 134.377   Chr12 : 111,865,049
0.000 0.341 0.659
rs79002142 lBF = 11.7979   Chr12 : 85,143,591
0.658 0.342 0.000
rs73201485 lBF = 11.279   Chr12 : 114,791,319
0.648 0.351 0.000
rs112742247 lBF = 13.3959   Chr12 : 85,030,619
0.648 0.352 0.000
rs17432871 lBF = 6.59959   Chr12 : 121,542,128
0.648 0.352 0.000
rs80132640 lBF = 11.0963   Chr12 : 49,426,460
0.639 0.361 0.000
rs117409850 lBF = 13.4266   Chr12 : 106,057,582
0.637 0.363 0.000
rs4766986 lBF = 8.99695   Chr12 : 113,076,475
0.625 0.375 0.000
rs117759274 lBF = 14.7453   Chr12 : 23,131,855
0.623 0.376 0.000
rs10774622 lBF = 16.6683   Chr12 : 111,833,348
0.000 0.380 0.620
rs117029533 lBF = 21.9889   Chr12 : 66,632,067
0.618 0.382 0.000
rs17722134 lBF = 13.8489   Chr12 : 72,401,694
0.606 0.394 0.000
rs739496 lBF = 22.8103   Chr12 : 111,887,659
0.000 0.395 0.605
rs7296313 lBF = 21.6862   Chr12 : 111,878,526
0.000 0.396 0.603
rs77103806 lBF = 6.36663   Chr12 : 23,021,423
0.603 0.397 0.000
rs12814941 lBF = 12.4883   Chr12 : 106,408,172
0.599 0.401 0.000
rs1528287 lBF = 13.6349   Chr12 : 80,985,872
0.592 0.408 0.000
rs7138803 lBF = 0.715138   Chr12 : 50,247,468
0.592 0.408 0.000
rs117629949 lBF = 14.77   Chr12 : 25,021,224
0.592 0.408 0.000
rs1029388 lBF = 19.1784   Chr12 : 111,926,901
0.000 0.415 0.585
rs11179079 lBF = 7.3206   Chr12 : 72,494,386
0.584 0.416 0.000
rs192051543 lBF = 14.1247   Chr12 : 22,657,770
0.583 0.417 0.000
rs78574971 lBF = 12.9395   Chr12 : 52,023,925
0.577 0.423 0.000
rs11608709 lBF = 15.4681   Chr12 : 99,302,859
0.575 0.425 0.000
rs114453043 lBF = 22.0948   Chr12 : 25,461,756
0.575 0.425 0.000
rs17443266 lBF = 15.2354   Chr12 : 19,169,453
0.569 0.431 0.000
rs35587409 lBF = 12.2827   Chr12 : 100,841,306
0.566 0.434 0.000
rs7307123 lBF = 21.9581   Chr12 : 54,524,397
0.565 0.434 0.000
rs80160299 lBF = 15.0308   Chr12 : 66,159,224
0.562 0.438 0.000
rs187353341 lBF = 19.0434   Chr12 : 121,557,376
0.559 0.441 0.000
rs74911677 lBF = 20.5271   Chr12 : 122,015,993
0.558 0.442 0.000
rs73040424 lBF = 7.46879   Chr12 : 5,665,454
0.557 0.443 0.000
rs11051689 lBF = 13.3747   Chr12 : 32,084,827
0.556 0.444 0.000
rs75626916 lBF = 11.7941   Chr12 : 108,663,870
0.552 0.448 0.000
rs12230170 lBF = 6.64286   Chr12 : 129,247,383
0.548 0.452 0.000
rs117139804 lBF = 18.4888   Chr12 : 116,233,671
0.546 0.453 0.000
rs78851502 lBF = 8.34221   Chr12 : 40,811,944
0.545 0.455 0.000
rs657197 lBF = 20.0865   Chr12 : 111,965,658
0.000 0.461 0.539
rs143136847 lBF = 1.54314   Chr12 : 82,748,339
0.538 0.462 0.000
rs11044722 lBF = 15.4222   Chr12 : 19,781,710
0.537 0.463 0.000
rs117863495 lBF = 14.7593   Chr12 : 129,432,374
0.536 0.464 0.000
rs9332958 lBF = 5.25634   Chr12 : 16,519,263
0.535 0.465 0.000
rs117437287 lBF = 16.5299   Chr12 : 23,389,839
0.533 0.467 0.000
rs11609031 lBF = 16.3836   Chr12 : 99,307,725
0.529 0.470 0.000
rs11065979 lBF = 94.2904   Chr12 : 112,059,557
0.527 0.473 0.000
rs73313995 lBF = 22.0276   Chr12 : 33,622,807
0.527 0.473 0.000
rs76775795 lBF = 13.6666   Chr12 : 115,385,431
0.526 0.474 0.000
rs117089640 lBF = 23.0292   Chr12 : 125,048,557
0.525 0.475 0.000
rs187986843 lBF = 15.061   Chr12 : 69,080,770
0.523 0.477 0.000
rs61944384 lBF = 10.148   Chr12 : 111,952,215
0.000 0.478 0.521
rs118079879 lBF = 5.09035   Chr12 : 41,713,306
0.521 0.479 0.000
rs76796201 lBF = 14.1948   Chr12 : 23,091,755
0.514 0.485 0.000
rs74910874 lBF = 2.61067   Chr12 : 67,086,810
0.511 0.489 0.000
rs1265564 lBF = 58.6971   Chr12 : 111,708,458
0.510 0.490 0.000
rs117636037 lBF = 18.8537   Chr12 : 38,519,375
0.509 0.491 0.000
rs2279695 lBF = 6.13321   Chr12 : 117,154,262
0.509 0.491 0.000
rs78294386 lBF = 14.58   Chr12 : 107,963,652
0.508 0.492 0.000
rs79015790 lBF = 14.8688   Chr12 : 128,700,249
0.505 0.495 0.000
rs117802803 lBF = 21.4181   Chr12 : 22,796,804
0.504 0.496 0.000
rs117624816 lBF = 14.1981   Chr12 : 18,210,143
0.503 0.497 0.000
rs117091826 lBF = 24.5799   Chr12 : 112,629,713
0.501 0.499 0.000
rs78221103 lBF = 16.6479   Chr12 : 104,562,673
0.500 0.500 0.000
rs76409154 lBF = 20.1612   Chr12 : 85,692,134
0.492 0.508 0.000
rs7307889 lBF = 7.08994   Chr12 : 5,981,353
0.491 0.509 0.000
rs4378452 lBF = 20.7259   Chr12 : 111,504,033
0.482 0.518 0.000
rs56269309 lBF = 12.8645   Chr12 : 127,453,025
0.480 0.520 0.000
rs61919599 lBF = 9.83827   Chr12 : 528,351
0.479 0.521 0.000
rs117761474 lBF = 15.8826   Chr12 : 113,029,356
0.473 0.527 0.000
rs144700679 lBF = 7.09223   Chr12 : 115,468,959
0.473 0.527 0.000
rs75489010 lBF = 27.7624   Chr12 : 115,986,702
0.469 0.531 0.000
rs16914920 lBF = 12.1807   Chr12 : 19,128,595
0.464 0.536 0.000
rs77821460 lBF = 20.1742   Chr12 : 20,274,936
0.448 0.552 0.000
rs80002652 lBF = 18.6612   Chr12 : 107,437,422
0.444 0.556 0.000
rs12582659 lBF = 4.82974   Chr12 : 76,064,528
0.444 0.556 0.000
rs111825271 lBF = 10.5466   Chr12 : 66,344,706
0.442 0.558 0.000
rs76450399 lBF = 14.1937   Chr12 : 9,143,781
0.442 0.558 0.000
rs215398 lBF = 19.4313   Chr12 : 47,767,134
0.440 0.560 0.000
rs76242156 lBF = 19.5711   Chr12 : 65,043,774
0.437 0.562 0.000
rs11115322 lBF = 13.8059   Chr12 : 83,019,188
0.436 0.564 0.000
rs74565952 lBF = 16.1651   Chr12 : 71,112,797
0.435 0.564 0.000
rs17040357 lBF = 13.7026   Chr12 : 108,665,316
0.435 0.565 0.000
rs73141422 lBF = 22.399   Chr12 : 83,882,469
0.433 0.566 0.000
rs34574480 lBF = 13.3586   Chr12 : 115,307,567
0.432 0.568 0.000
rs10506821 lBF = 13.2804   Chr12 : 80,496,923
0.432 0.568 0.000
rs12231974 lBF = 6.07834   Chr12 : 67,095,378
0.429 0.571 0.000
rs11065987 lBF = 90.6309   Chr12 : 112,072,424
0.427 0.573 0.000
rs111341849 lBF = 13.9983   Chr12 : 83,961,998
0.426 0.574 0.000
rs3809128 lBF = 2.10909   Chr12 : 56,709,919
0.425 0.575 0.000
rs2608700 lBF = 16.0704   Chr12 : 41,884,414
0.424 0.576 0.000
rs12423747 lBF = 15.1947   Chr12 : 71,084,299
0.417 0.582 0.000
rs73217910 lBF = 14.853   Chr12 : 118,450,865
0.415 0.585 0.000
rs73164250 lBF = 17.0593   Chr12 : 84,624,334
0.414 0.586 0.000
rs75289085 lBF = 19.4964   Chr12 : 18,147,653
0.411 0.589 0.000
rs12813285 lBF = 22.3499   Chr12 : 68,206,219
0.411 0.589 0.000
rs56360506 lBF = 10.2114   Chr12 : 53,222,800
0.411 0.589 0.000
rs78730305 lBF = 9.92833   Chr12 : 104,669,564
0.407 0.593 0.000
rs116877397 lBF = 30.7668   Chr12 : 121,162,996
0.400 0.600 0.000
rs76001134 lBF = 19.3411   Chr12 : 23,209,903
0.395 0.604 0.000
rs12370770 lBF = 24.384   Chr12 : 112,277,084
0.386 0.614 0.000
Affx-8411664 lBF = 18.4862   Chr12 : 71,094,955
0.384 0.615 0.000
rs76595471 lBF = 13.0273   Chr12 : 80,228,443
0.383 0.616 0.000
rs2089222 lBF = 1.58966   Chr12 : 117,002,658
0.380 0.620 0.000
rs2722223 lBF = 24.9818   Chr12 : 90,233,876
0.380 0.620 0.000
rs17528414 lBF = 17.7734   Chr12 : 32,352,055
0.379 0.620 0.000
rs78549223 lBF = 13.151   Chr12 : 71,168,008
0.379 0.621 0.000
rs12425131 lBF = 16.2355   Chr12 : 82,984,879
0.377 0.622 0.000
rs1653608 lBF = 16.5227   Chr12 : 121,706,733
0.376 0.624 0.000
rs73211928 lBF = 9.06643   Chr12 : 118,039,876
0.374 0.626 0.000
rs118113273 lBF = 22.5923   Chr12 : 128,300,100
0.372 0.628 0.000
rs115720202 lBF = 18.7627   Chr12 : 89,746,581
0.372 0.628 0.000
rs188610 lBF = 2.31323   Chr12 : 313,839
0.368 0.632 0.000
rs117439611 lBF = 14.8831   Chr12 : 520,944
0.366 0.634 0.000
rs61943445 lBF = 13.7019   Chr12 : 118,861,521
0.366 0.634 0.000
rs41279092 lBF = 7.635   Chr12 : 112,924,706
0.000 0.637 0.363
rs181609621 lBF = 1.56948   Chr12 : 32,810,759
0.362 0.637 0.000
rs2417373 lBF = 14.5305   Chr12 : 14,744,468
0.361 0.638 0.000
rs12321507 lBF = 16.2879   Chr12 : 96,134,818
0.361 0.638 0.000
rs79918060 lBF = 17.5524   Chr12 : 58,407,669
0.356 0.644 0.000
rs17813263 lBF = 23.117   Chr12 : 69,481,381
0.354 0.646 0.000
rs2244608 lBF = 24.424   Chr12 : 121,416,988
0.352 0.648 0.000
rs117470014 lBF = 18.6761   Chr12 : 74,652,195
0.345 0.655 0.000
rs11066301 lBF = 73.3256   Chr12 : 112,871,372
0.344 0.656 0.000
rs2251468 lBF = 12.8224   Chr12 : 121,405,126
0.000 0.656 0.344
rs12371484 lBF = 19.7008   Chr12 : 111,872,722
0.341 0.659 0.000
rs17696736 lBF = 77.5307   Chr12 : 112,486,818
0.340 0.660 0.000
rs117138325 lBF = 14.5458   Chr12 : 74,850,188
0.336 0.664 0.000
rs12308914 lBF = 12.8877   Chr12 : 104,633,842
0.334 0.666 0.000
rs78008978 lBF = 13.3787   Chr12 : 77,282,680
0.332 0.667 0.000
rs12821981 lBF = 18.716   Chr12 : 2,741,217
0.327 0.672 0.000
rs73045775 lBF = 23.3857   Chr12 : 8,674,905
0.327 0.673 0.001
rs35729753 lBF = 17.3029   Chr12 : 66,672,379
0.326 0.674 0.000
rs1169288 lBF = 29.3975   Chr12 : 121,416,650
0.324 0.676 0.000
rs11108227 lBF = 16.4201   Chr12 : 96,134,001
0.323 0.677 0.000
rs11611673 lBF = 13.5862   Chr12 : 121,451,150
0.323 0.677 0.001
rs2650000 lBF = 12.7264   Chr12 : 121,388,962
0.322 0.678 0.000
rs79944777 lBF = 10.9261   Chr12 : 73,011,538
0.321 0.679 0.000
rs1291621 lBF = 15.6995   Chr12 : 46,340,821
0.321 0.679 0.000
rs4238083 lBF = 14.8083   Chr12 : 42,924,769
0.319 0.680 0.000
rs79235855 lBF = 16.45   Chr12 : 1,537,749
0.318 0.682 0.000
rs79680354 lBF = 22.0763   Chr12 : 119,361,070
0.317 0.682 0.000
rs117458579 lBF = 15.4218   Chr12 : 15,351,989
0.316 0.684 0.000
rs78437391 lBF = 22.4064   Chr12 : 129,229,615
0.311 0.688 0.001
rs17630235 lBF = 80.0182   Chr12 : 112,591,686
0.309 0.691 0.000
rs117559199 lBF = 8.42044   Chr12 : 75,424,551
0.306 0.694 0.000
rs5742692 lBF = 2.17819   Chr12 : 102,799,598
0.304 0.695 0.000
rs2900174 lBF = 7.38903   Chr12 : 11,547,532
0.300 0.700 0.000
rs75876943 lBF = 15.0045   Chr12 : 86,555,845
0.294 0.706 0.000
rs117929870 lBF = 16.9839   Chr12 : 108,524,849
0.292 0.708 0.000
rs75311705 lBF = 0.456159   Chr12 : 125,714,596
0.284 0.716 0.000
rs117605016 lBF = 28.0976   Chr12 : 129,614,385
0.281 0.719 0.000
rs117839344 lBF = 8.17878   Chr12 : 58,183,636
0.279 0.721 0.000
rs4766897 lBF = 64.6713   Chr12 : 112,179,471
0.277 0.723 0.000
rs10773087 lBF = 5.56414   Chr12 : 124,878,404
0.275 0.725 0.000
rs138477082 lBF = 2.62368   Chr12 : 103,796,611
0.272 0.728 0.000
rs4763879 lBF = 7.5082   Chr12 : 9,910,164
0.271 0.729 0.000
rs17102257 lBF = 14.6206   Chr12 : 54,126,061
0.263 0.737 0.000
rs182057829 lBF = 2.49683   Chr12 : 97,412,327
0.254 0.745 0.000
rs3809272 lBF = 28.191   Chr12 : 111,800,258
0.000 0.748 0.252
rs112979434 lBF = 9.23181   Chr12 : 9,885,707
0.000 0.749 0.251
rs11052552 lBF = 6.57279   Chr12 : 9,855,958
0.250 0.750 0.000
rs77662038 lBF = 13.6756   Chr12 : 83,497,229
0.243 0.757 0.000
rs79335261 lBF = 5.7548   Chr12 : 56,497,641
0.242 0.758 0.000
rs10774613 lBF = 10.8225   Chr12 : 111,546,165
0.236 0.764 0.000
rs2292303 lBF = 0.924716   Chr12 : 102,513,531
0.233 0.767 0.000
rs11175593 lBF = 2.45774   Chr12 : 40,601,940
0.232 0.768 0.000
rs11065791 lBF = 12.9532   Chr12 : 111,460,000
0.229 0.771 0.000
rs77649004 lBF = 14.247   Chr12 : 96,135,916
0.228 0.772 0.000
rs116962450 lBF = 7.81708   Chr12 : 90,500,741
0.223 0.776 0.000
rs199710891 lBF = 5.87106   Chr12 : 14,273,071
0.222 0.777 0.000
rs10466829 lBF = 10.1959   Chr12 : 9,876,091
0.000 0.780 0.220
rs1183910 lBF = 18.2502   Chr12 : 121,420,807
0.217 0.783 0.000
rs71454665 lBF = 8.54321   Chr12 : 121,198,711
0.208 0.791 0.001
rs10744777 lBF = 24.8672   Chr12 : 112,233,018
0.000 0.793 0.207
rs7294372 lBF = 0.932637   Chr12 : 114,637,423
0.205 0.795 0.000
rs3764021 lBF = 5.72645   Chr12 : 9,833,628
0.000 0.808 0.192
rs76191003 lBF = 9.4885   Chr12 : 47,182,531
0.192 0.808 0.000
rs12423247 lBF = 0.921356   Chr12 : 96,858,362
0.190 0.810 0.000
rs74452899 lBF = 12.3113   Chr12 : 89,024,239
0.187 0.813 0.000
rs2268146 lBF = 8.28082   Chr12 : 9,869,271
0.000 0.816 0.183
rs73114523 lBF = 14.6366   Chr12 : 54,602,032
0.183 0.817 0.000
rs2733283 lBF = 17.1055   Chr12 : 41,935,977
0.182 0.818 0.000
rs73200436 lBF = 2.81861   Chr12 : 110,062,693
0.172 0.828 0.000
rs7488011 lBF = 12.0453   Chr12 : 9,925,336
0.169 0.831 0.000
rs2238151 lBF = 27.2496   Chr12 : 112,211,833
0.000 0.832 0.168
rs7968960 lBF = 18.337   Chr12 : 111,426,615
0.165 0.835 0.000
rs77572683 lBF = 7.85519   Chr12 : 114,261,767
0.161 0.839 0.001
rs191780267 lBF = 4.50227   Chr12 : 89,289,255
0.158 0.842 0.000
rs1265565 lBF = 23.6926   Chr12 : 111,715,197
0.152 0.848 0.000
rs10849937 lBF = 8.09916   Chr12 : 111,792,427
0.000 0.849 0.151
rs10744782 lBF = 6.85869   Chr12 : 113,166,569
0.150 0.850 0.000
rs111969502 lBF = 5.3967   Chr12 : 59,848,381
0.149 0.850 0.000
rs117303215 lBF = 9.21583   Chr12 : 129,627,812
0.146 0.854 0.000
rs12422544 lBF = 1.68441   Chr12 : 40,528,432
0.143 0.856 0.000
rs11057864 lBF = 6.42106   Chr12 : 125,335,950
0.133 0.867 0.000
rs7298767 lBF = 17.6072   Chr12 : 22,475,701
0.130 0.869 0.000
rs12304534 lBF = 8.83589   Chr12 : 89,683,643
0.128 0.872 0.000
rs144288546 lBF = 0.146461   Chr12 : 129,069,682
0.127 0.872 0.000
rs61756485 lBF = 16.787   Chr12 : 99,020,125
0.127 0.873 0.000
rs6489835 lBF = 12.21   Chr12 : 111,365,043
0.126 0.874 0.000
rs141480969 lBF = 0.733874   Chr12 : 62,496,278
0.126 0.874 0.000
rs116938548 lBF = 0.178688   Chr12 : 4,808,251
0.124 0.876 0.000
rs59753639 lBF = 4.25806   Chr12 : 25,140,690
0.122 0.878 0.000
rs3794288 lBF = 0.216509   Chr12 : 2,789,221
0.122 0.878 0.000
rs6580622 lBF = 15.5075   Chr12 : 47,936,778
0.117 0.883 0.000
rs7297186 lBF = 6.68652   Chr12 : 111,778,178
0.000 0.886 0.114
rs79476482 lBF = 14.9329   Chr12 : 76,084,550
0.109 0.890 0.000
rs2160519 lBF = 9.54207   Chr12 : 13,787,846
0.109 0.891 0.000
rs35446494 lBF = 7.95755   Chr12 : 119,533,218
0.104 0.896 0.000
rs1386003 lBF = 12.5875   Chr12 : 13,213,682
0.102 0.897 0.000
rs886125 lBF = 9.62554   Chr12 : 111,365,324
0.092 0.908 0.000
rs3764023 lBF = 6.6728   Chr12 : 9,801,382
0.000 0.914 0.085
rs7132908 lBF = 0.453103   Chr12 : 50,263,148
0.085 0.915 0.000
rs993226 lBF = 0.111824   Chr12 : 84,886,573
0.084 0.916 0.000
rs11104268 lBF = 0.0582113   Chr12 : 76,627,445
0.000 0.916 0.084
rs75593565 lBF = 13.6234   Chr12 : 32,115,266
0.082 0.918 0.000
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rs143980687 lBF = 0   Chr12 : 1,661,608
0.001 0.999 0.001
rs4542491 lBF = 0   Chr12 : 82,536,844
0.001 0.999 0.001
rs7956634 lBF = 0   Chr12 : 15,321,194
0.001 0.999 0.001
rs188585019 lBF = 0   Chr12 : 86,564,926
0.001 0.999 0.001
rs151326733 lBF = 0   Chr12 : 16,189,478
0.001 0.999 0.001
rs2188380 lBF = 0   Chr12 : 111,386,127
0.001 0.999 0.001
rs141955301 lBF = 0   Chr12 : 2,358,738
0.001 0.999 0.001
rs138037897 lBF = 0   Chr12 : 29,985,498
0.001 0.999 0.001
rs192568883 lBF = 0   Chr12 : 107,606,126
0.001 0.999 0.001
rs139427007 lBF = 0   Chr12 : 97,596,103
0.001 0.999 0.001
rs1809889 lBF = 0   Chr12 : 124,801,226
0.001 0.999 0.001
rs182408739 lBF = 0   Chr12 : 65,726,649
0.001 0.999 0.001
rs146978549 lBF = 0   Chr12 : 17,049,912
0.001 0.999 0.001
rs17019682 lBF = -0.0237381   Chr12 : 92,305,270
0.001 0.999 0.000
rs118009632 lBF = 0.732821   Chr12 : 54,959,672
0.000 0.999 0.001
rs12425791 lBF = 0.00041025   Chr12 : 783,484
0.000 0.999 0.001
rs11833289 lBF = -0.00000351   Chr12 : 55,451,694
0.001 0.999 0.000
rs8179116 lBF = -0.00001761   Chr12 : 109,025,427
0.000 0.999 0.001
rs189340018 lBF = -0.00002107   Chr12 : 107,628,680
0.001 0.999 0.000
rs147510300 lBF = -0.0000275   Chr12 : 86,318,548
0.000 0.999 0.001
rs150696478 lBF = -0.0000275   Chr12 : 86,321,388
0.000 0.999 0.001
rs3026485 lBF = -0.00004701   Chr12 : 110,782,027
0.000 0.999 0.001
rs17399946 lBF = -0.0373469   Chr12 : 24,077,509
0.001 0.999 0.000
rs12815613 lBF = -0.107416   Chr12 : 121,407,256
0.000 0.999 0.001
rs12229654 lBF = -0.00004675   Chr12 : 111,414,461
0.001 0.999 0.000
rs7135417 lBF = -0.0328155   Chr12 : 128,176,235
0.001 0.999 0.000

This table lists the top 500 variants ordered by p(effect).

The full results table can be downloaded from this page.

 
Variant clusters with highest protective effect

(posterior probability > 0.05)

Cluster X0186
log Bayes Factor = 35.9761
contains 2 variants
0.5948
Cluster X0335
log Bayes Factor = 12.3689
contains 1 variants
0.4546
Cluster X0175
log Bayes Factor = 45.9153
contains 4 variants
0.0683
Cluster X0323
log Bayes Factor = 180.399
contains 5 variants
0.0661
Variant clusters with highest risk effect

(posterior probability > 0.05)

Cluster X0184
log Bayes Factor = 188.416
contains 8 variants
0.9976
Cluster X0161
log Bayes Factor = 609.219
contains 20 variants
0.9907
Cluster X0276
log Bayes Factor = 187.108
contains 9 variants
0.9704
Cluster X0070
log Bayes Factor = 421.182
contains 15 variants
0.9673
Cluster X0269
log Bayes Factor = 155.455
contains 9 variants
0.9629
Cluster X0271
log Bayes Factor = 256.743
contains 10 variants
0.9521
Cluster X0081
log Bayes Factor = 278.568
contains 10 variants
0.9452
Cluster X0237
log Bayes Factor = 123.902
contains 6 variants
0.9404
Cluster X0106
log Bayes Factor = 980.916
contains 30 variants
0.9402
Cluster X0273
log Bayes Factor = 109.896
contains 6 variants
0.9399
Cluster X0150
log Bayes Factor = 861.091
contains 26 variants
0.9287
Cluster X0293
log Bayes Factor = 169.051
contains 7 variants
0.9250
Cluster X0134
log Bayes Factor = 151.731
contains 8 variants
0.9160
Cluster X0033
log Bayes Factor = 379.444
contains 13 variants
0.9145
Cluster X0178
log Bayes Factor = 225.6
contains 9 variants
0.8967
Cluster X0155
log Bayes Factor = 348.568
contains 12 variants
0.8801
Cluster X0039
log Bayes Factor = 463.231
contains 17 variants
0.8615
Cluster X0122
log Bayes Factor = 219.114
contains 9 variants
0.8578
Cluster X0226
log Bayes Factor = 145.726
contains 8 variants
0.8562
Cluster X0246
log Bayes Factor = 121.08
contains 5 variants
0.8511
Cluster X0109
log Bayes Factor = 257.685
contains 11 variants
0.8489
Cluster X0148
log Bayes Factor = 315.237
contains 11 variants
0.8354
Cluster X0201
log Bayes Factor = 368.049
contains 13 variants
0.8342
Cluster X0075
log Bayes Factor = 431.344
contains 16 variants
0.8254
Cluster X0068
log Bayes Factor = 127.774
contains 6 variants
0.8239
Cluster X0082
log Bayes Factor = 496.905
contains 17 variants
0.8173
Cluster X0157
log Bayes Factor = 172.957
contains 8 variants
0.8160
Cluster X0078
log Bayes Factor = 203.49
contains 11 variants
0.8089
Cluster X0240
log Bayes Factor = 104.862
contains 6 variants
0.8083
Cluster X0062
log Bayes Factor = 68.7461
contains 4 variants
0.8073
Cluster X0131
log Bayes Factor = 143.942
contains 8 variants
0.8034
Cluster X0045
log Bayes Factor = 446.264
contains 16 variants
0.7821
Cluster X0086
log Bayes Factor = 131.002
contains 8 variants
0.7528
Cluster X0227
log Bayes Factor = 249.287
contains 11 variants
0.7321
Cluster X0194
log Bayes Factor = 189.9
contains 5 variants
0.7300
Cluster X0177
log Bayes Factor = 254.872
contains 10 variants
0.7230
Cluster X0055
log Bayes Factor = 274.911
contains 10 variants
0.7178
Cluster X0213
log Bayes Factor = 405.918
contains 15 variants
0.7045
Cluster X0026
log Bayes Factor = 232.119
contains 9 variants
0.7032
Cluster X0247
log Bayes Factor = 98.6507
contains 6 variants
0.6943
Cluster X0203
log Bayes Factor = 363.522
contains 11 variants
0.6923
Cluster X0248
log Bayes Factor = 254.854
contains 10 variants
0.6845
Cluster X0253
log Bayes Factor = 331.491
contains 13 variants
0.6799
Cluster X0058
log Bayes Factor = 183.199
contains 8 variants
0.6712
Cluster X0167
log Bayes Factor = 136.48
contains 6 variants
0.6678
Cluster X0145
log Bayes Factor = 274.587
contains 11 variants
0.6588
Cluster X0189
log Bayes Factor = 149.681
contains 5 variants
0.6581
Cluster X0063
log Bayes Factor = 107.557
contains 5 variants
0.6541
Cluster X0324
log Bayes Factor = 32.1341
contains 1 variants
0.6267
Cluster X0225
log Bayes Factor = 36.4143
contains 3 variants
0.6212
Cluster X0180
log Bayes Factor = 410.88
contains 15 variants
0.6187
Cluster X0019
log Bayes Factor = 372.36
contains 16 variants
0.6135
Cluster X0142
log Bayes Factor = 295.63
contains 12 variants
0.6086
Cluster X0152
log Bayes Factor = 331.156
contains 10 variants
0.6085
Cluster X0258
log Bayes Factor = 104.851
contains 6 variants
0.6065
Cluster X0012
log Bayes Factor = 112.432
contains 5 variants
0.6009
Cluster X0088
log Bayes Factor = 243.609
contains 9 variants
0.5995
Cluster X0074
log Bayes Factor = 353.38
contains 15 variants
0.5986
Cluster X0091
log Bayes Factor = 303.64
contains 12 variants
0.5934
Cluster X0205
log Bayes Factor = 674.183
contains 18 variants
0.5820
Cluster X0249
log Bayes Factor = 244.457
contains 11 variants
0.5800
Cluster X0049
log Bayes Factor = 597.061
contains 18 variants
0.5759
Cluster X0119
log Bayes Factor = 114.358
contains 6 variants
0.5708
Cluster X0129
log Bayes Factor = 195.809
contains 7 variants
0.5626
Cluster X0032
log Bayes Factor = 255.737
contains 12 variants
0.5578
Cluster X0277
log Bayes Factor = 726.213
contains 23 variants
0.5521
Cluster X0192
log Bayes Factor = 402.511
contains 14 variants
0.5518
Cluster X0057
log Bayes Factor = 439.35
contains 16 variants
0.5494
Cluster X0077
log Bayes Factor = 571.533
contains 17 variants
0.5490
Cluster X0171
log Bayes Factor = 291.293
contains 14 variants
0.5430
Cluster X0040
log Bayes Factor = 542.747
contains 16 variants
0.5353
Cluster X0208
log Bayes Factor = 40.6733
contains 2 variants
0.5349
Cluster X0014
log Bayes Factor = 131.677
contains 6 variants
0.5267
Cluster X0330
log Bayes Factor = 183.455
contains 2 variants
0.5257
Cluster X0320
log Bayes Factor = 110.964
contains 6 variants
0.5211
Cluster X0181
log Bayes Factor = 141.396
contains 6 variants
0.5209
Cluster X0209
log Bayes Factor = 214.798
contains 8 variants
0.5170
Cluster X0037
log Bayes Factor = 171.712
contains 6 variants
0.5144
Cluster X0244
log Bayes Factor = 122.647
contains 5 variants
0.5131
Cluster X0174
log Bayes Factor = 214.209
contains 8 variants
0.5126
Cluster X0153
log Bayes Factor = 328.394
contains 11 variants
0.5103
Cluster X0118
log Bayes Factor = 91.1908
contains 5 variants
0.5044
Cluster X0053
log Bayes Factor = 218.825
contains 12 variants
0.5032
Cluster X0218
log Bayes Factor = 425.579
contains 18 variants
0.5016
Cluster X0093
log Bayes Factor = 289.878
contains 10 variants
0.5014
Cluster X0124
log Bayes Factor = 336.468
contains 13 variants
0.5010
Cluster X0176
log Bayes Factor = 407.797
contains 14 variants
0.4982
Cluster X0212
log Bayes Factor = 300.777
contains 10 variants
0.4912
Cluster X0140
log Bayes Factor = 164.536
contains 8 variants
0.4880
Cluster X0166
log Bayes Factor = 230.746
contains 8 variants
0.4817
Cluster X0060
log Bayes Factor = 242.413
contains 5 variants
0.4797
Cluster X0067
log Bayes Factor = 179.381
contains 8 variants
0.4790
Cluster X0264
log Bayes Factor = 205.833
contains 10 variants
0.4765
Cluster X0156
log Bayes Factor = 226.954
contains 9 variants
0.4695
Cluster X0210
log Bayes Factor = 426.159
contains 17 variants
0.4677
Cluster X0005
log Bayes Factor = 282.915
contains 11 variants
0.4661
Cluster X0257
log Bayes Factor = 281.184
contains 10 variants
0.4569
Cluster X0087
log Bayes Factor = 894.58
contains 26 variants
0.4463
Cluster X0054
log Bayes Factor = 197.338
contains 9 variants
0.4462
Cluster X0222
log Bayes Factor = 431.582
contains 17 variants
0.4448
Cluster X0199
log Bayes Factor = 350.038
contains 3 variants
0.4425
Cluster X0274
log Bayes Factor = 454.783
contains 18 variants
0.4403
Cluster X0071
log Bayes Factor = 131.269
contains 6 variants
0.4392
Cluster X0059
log Bayes Factor = 922.497
contains 26 variants
0.4372
Cluster X0139
log Bayes Factor = 304.555
contains 10 variants
0.4365
Cluster X0231
log Bayes Factor = 82.3185
contains 5 variants
0.4307
Cluster X0162
log Bayes Factor = 144.479
contains 9 variants
0.4265
Cluster X0236
log Bayes Factor = 83.9265
contains 3 variants
0.4245
Cluster X0327
log Bayes Factor = 118.248
contains 3 variants
0.4222
Cluster X0261
log Bayes Factor = 420.614
contains 20 variants
0.4217
Cluster X0047
log Bayes Factor = 378.621
contains 14 variants
0.4211
Cluster X0304
log Bayes Factor = 64.0127
contains 3 variants
0.4201
Cluster X0035
log Bayes Factor = 620.567
contains 37 variants
0.4157
Cluster X0044
log Bayes Factor = 1165.44
contains 34 variants
0.4067
Cluster X0072
log Bayes Factor = 1189.98
contains 37 variants
0.4060
Cluster X0001
log Bayes Factor = 167.541
contains 7 variants
0.4037
Cluster X0064
log Bayes Factor = 166.06
contains 10 variants
0.3987
Cluster X0214
log Bayes Factor = 186.582
contains 8 variants
0.3976
Cluster X0268
log Bayes Factor = 213.591
contains 8 variants
0.3956
Cluster X0098
log Bayes Factor = 246.226
contains 8 variants
0.3952
Cluster X0283
log Bayes Factor = 162.98
contains 9 variants
0.3776
Cluster X0107
log Bayes Factor = 151.016
contains 1 variants
0.3762
Cluster X0121
log Bayes Factor = 131.08
contains 9 variants
0.3740
Cluster X0143
log Bayes Factor = 179.808
contains 8 variants
0.3715
Cluster X0042
log Bayes Factor = 307.243
contains 12 variants
0.3705
Cluster X0069
log Bayes Factor = 519.392
contains 20 variants
0.3682
Cluster X0079
log Bayes Factor = 413.803
contains 22 variants
0.3656
Cluster X0094
log Bayes Factor = 562.956
contains 18 variants
0.3619
Cluster X0141
log Bayes Factor = 742.063
contains 30 variants
0.3589
Cluster X0224
log Bayes Factor = 278.692
contains 11 variants
0.3588
Cluster X0197
log Bayes Factor = 158.582
contains 8 variants
0.3583
Cluster X0123
log Bayes Factor = 382.779
contains 14 variants
0.3540
Cluster X0085
log Bayes Factor = 138.902
contains 6 variants
0.3536
Cluster X0028
log Bayes Factor = 120.445
contains 7 variants
0.3531
Cluster X0185
log Bayes Factor = 84.7127
contains 6 variants
0.3402
Cluster X0132
log Bayes Factor = 267.393
contains 11 variants
0.3363
Cluster X0315
log Bayes Factor = 42.686
contains 2 variants
0.3351
Cluster X0164
log Bayes Factor = 463.793
contains 16 variants
0.3350
Cluster X0290
log Bayes Factor = 333.908
contains 13 variants
0.3305
Cluster X0154
log Bayes Factor = 282.084
contains 12 variants
0.3271
Cluster X0232
log Bayes Factor = 695.273
contains 23 variants
0.3263
Cluster X0267
log Bayes Factor = 92.4806
contains 5 variants
0.3247
Cluster X0275
log Bayes Factor = 219.726
contains 10 variants
0.3215
Cluster X0020
log Bayes Factor = 557.721
contains 18 variants
0.3189
Cluster X0127
log Bayes Factor = 276.004
contains 14 variants
0.3135
Cluster X0080
log Bayes Factor = 455.123
contains 21 variants
0.3132
Cluster X0110
log Bayes Factor = 721.325
contains 13 variants
0.3131
Cluster X0147
log Bayes Factor = 133.509
contains 9 variants
0.3086
Cluster X0238
log Bayes Factor = 97.9307
contains 4 variants
0.3043
Cluster X0229
log Bayes Factor = 347.165
contains 13 variants
0.3032
Cluster X0279
log Bayes Factor = 52.8832
contains 2 variants
0.3009
Cluster X0073
log Bayes Factor = 785.614
contains 25 variants
0.3008
Cluster X0076
log Bayes Factor = 310.928
contains 15 variants
0.2910
Cluster X0193
log Bayes Factor = 303.265
contains 16 variants
0.2902
Cluster X0030
log Bayes Factor = 216.364
contains 9 variants
0.2898
Cluster X0050
log Bayes Factor = 397.79
contains 16 variants
0.2896
Cluster X0004
log Bayes Factor = 32.8452
contains 2 variants
0.2894
Cluster X0126
log Bayes Factor = 384.432
contains 15 variants
0.2877
Cluster X0165
log Bayes Factor = 303.727
contains 12 variants
0.2859
Cluster X0332
log Bayes Factor = 65.2374
contains 3 variants
0.2838
Cluster X0256
log Bayes Factor = 211.588
contains 9 variants
0.2622
Cluster X0043
log Bayes Factor = 517.108
contains 20 variants
0.2534
Cluster X0259
log Bayes Factor = 246.237
contains 11 variants
0.2511
Cluster X0172
log Bayes Factor = 80.2701
contains 3 variants
0.2503
Cluster X0065
log Bayes Factor = 53.0717
contains 3 variants
0.2464
Cluster X0220
log Bayes Factor = 142.284
contains 7 variants
0.2441
Cluster X0337
log Bayes Factor = 84.9395
contains 2 variants
0.2423
Cluster X0015
log Bayes Factor = 356.23
contains 15 variants
0.2360
Cluster X0084
log Bayes Factor = 433.078
contains 21 variants
0.2347
Cluster X0029
log Bayes Factor = 709.102
contains 23 variants
0.2336
Cluster X0191
log Bayes Factor = 163.555
contains 8 variants
0.2326
Cluster X0182
log Bayes Factor = 91.4459
contains 4 variants
0.2324
Cluster X0170
log Bayes Factor = 264.081
contains 11 variants
0.2286
Cluster X0111
log Bayes Factor = 403.183
contains 18 variants
0.2272
Cluster X0089
log Bayes Factor = 308.747
contains 13 variants
0.2183
Cluster X0061
log Bayes Factor = 293.105
contains 15 variants
0.2168
Cluster X0103
log Bayes Factor = 194.456
contains 13 variants
0.2161
Cluster X0046
log Bayes Factor = 387.972
contains 16 variants
0.2155
Cluster X0159
log Bayes Factor = 152.327
contains 7 variants
0.2113
Cluster X0297
log Bayes Factor = 63.8292
contains 4 variants
0.2107
Cluster X0125
log Bayes Factor = 215.738
contains 7 variants
0.2095
Cluster X0024
log Bayes Factor = 309.44
contains 13 variants
0.2085
Cluster X0278
log Bayes Factor = 173.437
contains 11 variants
0.2071
Cluster X0263
log Bayes Factor = 240.36
contains 13 variants
0.2004
Cluster X0003
log Bayes Factor = 195.6
contains 8 variants
0.2000
Cluster X0163
log Bayes Factor = 122.554
contains 6 variants
0.1923
Cluster X0188
log Bayes Factor = 222.629
contains 14 variants
0.1915
Cluster X0018
log Bayes Factor = 430.611
contains 18 variants
0.1892
Cluster X0298
log Bayes Factor = 220.671
contains 1 variants
0.1810
Cluster X0204
log Bayes Factor = 169.796
contains 8 variants
0.1800
Cluster X0169
log Bayes Factor = 331.98
contains 16 variants
0.1789
Cluster X0095
log Bayes Factor = 179.348
contains 8 variants
0.1765
Cluster X0230
log Bayes Factor = 131.696
contains 7 variants
0.1762
Cluster X0051
log Bayes Factor = 376.793
contains 14 variants
0.1754
Cluster X0102
log Bayes Factor = 99.5678
contains 5 variants
0.1690
Cluster X0284
log Bayes Factor = 192.532
contains 9 variants
0.1654
Cluster X0146
log Bayes Factor = 686.343
contains 22 variants
0.1626
Cluster X0223
log Bayes Factor = 122.347
contains 7 variants
0.1613
Cluster X0013
log Bayes Factor = 548.265
contains 23 variants
0.1607
Cluster X0021
log Bayes Factor = 338.631
contains 13 variants
0.1474
Cluster X0007
log Bayes Factor = 107.567
contains 7 variants
0.1454
Cluster X0301
log Bayes Factor = 297.489
contains 2 variants
0.1451
Cluster X0117
log Bayes Factor = 453.246
contains 21 variants
0.1416
Cluster X0041
log Bayes Factor = 306.192
contains 14 variants
0.1164
Cluster X0120
log Bayes Factor = 79.6695
contains 4 variants
0.1145
Cluster X0083
log Bayes Factor = 351.917
contains 13 variants
0.1144
Cluster X0179
log Bayes Factor = 426.274
contains 17 variants
0.1140
Cluster X0326
log Bayes Factor = 112.92
contains 5 variants
0.1140
Cluster X0052
log Bayes Factor = 654.387
contains 25 variants
0.1075
Cluster X0048
log Bayes Factor = 358.819
contains 19 variants
0.1041
Cluster X0133
log Bayes Factor = 224.204
contains 11 variants
0.1018
Cluster X0100
log Bayes Factor = 730.252
contains 26 variants
0.1014
Cluster X0219
log Bayes Factor = 230.324
contains 15 variants
0.0847
Cluster X0243
log Bayes Factor = 104.974
contains 6 variants
0.0804
Cluster X0338
log Bayes Factor = 26.5485
contains 1 variants
0.0761
Cluster X0113
log Bayes Factor = 49.7598
contains 3 variants
0.0699
 
 

The TreeWAS Database is the result of research conducted at the Oxford Big Data Institute at the University of Oxford.

This research has been conducted using the UK Biobank Resource (application number 10625). This work uses data provided by patients and collected by the NHS as part of their care and support.

This research has been conducted with the support of the Wellcome Trust (100956/Z/13/Z and 090532/Z/09/Z and 100308/Z/12/Z), the Danish National Research Foundation, Takeda, the Medical Research Council (MC_UU_12010/3), the Oak Foundation (OCAY-15-520), the National Institute for Health Research (NIHR) Oxford Biomedical Research Centre (BRC), the Wellcome Trust/Royal Society (204290/Z/16/Z) and the Li Ka Shing Foundation.

This website was created, designed, and edited by ORCID iD iconPatrick K. Albers

The contents of TreeWAS.org are available under the Creative Commons Attribution 4.0 International License (CC BY 4.0) with attribution (citation) required.

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